RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 C1QTNF3Q9BXJ4 246 aa17.9■□□□□ 0.46
PDLIM3-201ENST00000284767 SUV39H2Q9H5I1 410 aa17.9■□□□□ 0.46
PDLIM3-201ENST00000284767 ITGB1BP2Q9UKP3 347 aa17.9■□□□□ 0.46
PDLIM3-201ENST00000284767 ASB1Q9Y576 335 aa17.9■□□□□ 0.46
PDLIM3-201ENST00000284767 KPNA4O00629 521 aaPredicted RBP17.9■□□□□ 0.46
PDLIM3-201ENST00000284767 VIPR2P41587 438 aa17.9■□□□□ 0.46
PDLIM3-201ENST00000284767 PTGER3P43115 390 aa17.9■□□□□ 0.46
PDLIM3-201ENST00000284767 CLCN7P51798 805 aa17.9■□□□□ 0.46
PDLIM3-201ENST00000284767 HK3P52790 923 aa17.9■□□□□ 0.46
PDLIM3-201ENST00000284767 MESP2Q0VG99 397 aa17.9■□□□□ 0.46
PDLIM3-201ENST00000284767 TIGD2Q4W5G0 525 aa17.9■□□□□ 0.46
PDLIM3-201ENST00000284767 CLEC4FQ8N1N0 589 aa17.9■□□□□ 0.46
PDLIM3-201ENST00000284767 RSPRY1Q96DX4 576 aa17.9■□□□□ 0.46
PDLIM3-201ENST00000284767 MCOLN1Q9GZU1 580 aa17.9■□□□□ 0.46
PDLIM3-201ENST00000284767 SLAMF8Q9P0V8 285 aa17.9■□□□□ 0.46
PDLIM3-201ENST00000284767 SLC25A13Q9UJS0 675 aa17.9■□□□□ 0.46
PDLIM3-201ENST00000284767 MRPS23Q9Y3D9 190 aaKnown RBP17.9■□□□□ 0.46
PDLIM3-201ENST00000284767 TIMM22Q9Y584 194 aa17.9■□□□□ 0.46
PDLIM3-201ENST00000284767 V9GYQ6 96 aa17.9■□□□□ 0.46
PDLIM3-201ENST00000284767 SPTBN5Q9NRC6 3674 aaKnown RBP17.9■□□□□ 0.46
PDLIM3-201ENST00000284767 SCN8AQ9UQD0 1980 aa17.9■□□□□ 0.46
PDLIM3-201ENST00000284767 SYCE1LA8MT33 242 aa17.89■□□□□ 0.46
PDLIM3-201ENST00000284767 STX16O14662 325 aa17.89■□□□□ 0.46
PDLIM3-201ENST00000284767 XYLBO75191 536 aa17.89■□□□□ 0.46
PDLIM3-201ENST00000284767 RSL1D1O76021 490 aaKnown RBP17.89■□□□□ 0.46
PDLIM3-201ENST00000284767 PFKLP17858 780 aa17.89■□□□□ 0.46
PDLIM3-201ENST00000284767 PLA2G16P53816 162 aa17.89■□□□□ 0.46
PDLIM3-201ENST00000284767 ITGADQ13349 1161 aa17.89■□□□□ 0.46
PDLIM3-201ENST00000284767 POM121L1PQ3SYA9 428 aa17.89■□□□□ 0.46
PDLIM3-201ENST00000284767 FAM98BQ52LJ0 330 aaKnown RBP17.89■□□□□ 0.46
PDLIM3-201ENST00000284767 FKBP9P1Q75LS8 142 aa17.89■□□□□ 0.46
PDLIM3-201ENST00000284767 R3HCC1LQ7Z5L2 792 aaKnown RBP17.89■□□□□ 0.46
PDLIM3-201ENST00000284767 IGFN1Q86VF2 1251 aa17.89■□□□□ 0.46
PDLIM3-201ENST00000284767 SPARTQ8N0X7 666 aa17.89■□□□□ 0.46
PDLIM3-201ENST00000284767 KCNJ9Q92806 393 aa17.89■□□□□ 0.46
PDLIM3-201ENST00000284767 ZFYVE19Q96K21 471 aa17.89■□□□□ 0.46
PDLIM3-201ENST00000284767 CSF3RQ99062 836 aa17.89■□□□□ 0.46
PDLIM3-201ENST00000284767 CIPCQ9C0C6 399 aa17.89■□□□□ 0.46
PDLIM3-201ENST00000284767 TMEM165Q9HC07 324 aa17.89■□□□□ 0.46
PDLIM3-201ENST00000284767 TRNAU1APQ9NX07 287 aaKnown RBP17.89■□□□□ 0.46
PDLIM3-201ENST00000284767 USP22Q9UPT9 525 aa17.89■□□□□ 0.46
PDLIM3-201ENST00000284767 MYO9BQ13459 2157 aa17.89■□□□□ 0.45
PDLIM3-201ENST00000284767 GLYATL1P3A0A0U1RQE8 302 aa17.89■□□□□ 0.45
PDLIM3-201ENST00000284767 TTC36A6NLP5 189 aa17.89■□□□□ 0.45
PDLIM3-201ENST00000284767 TTC34A8MYJ7 566 aa17.89■□□□□ 0.45
PDLIM3-201ENST00000284767 C5orf67F2Z3F1 127 aa17.89■□□□□ 0.45
PDLIM3-201ENST00000284767 PRMT5O14744 637 aaPredicted RBP17.89■□□□□ 0.45
PDLIM3-201ENST00000284767 ADAM23O75077 832 aa17.89■□□□□ 0.45
PDLIM3-201ENST00000284767 DNAJB5O75953 348 aa17.89■□□□□ 0.45
PDLIM3-201ENST00000284767 MLYCDO95822 493 aa17.89■□□□□ 0.45
PDLIM3-201ENST00000284767 DDX6P26196 483 aaKnown RBP eCLIP17.89■□□□□ 0.45
PDLIM3-201ENST00000284767 SOX11P35716 441 aa17.89■□□□□ 0.45
PDLIM3-201ENST00000284767 MAPK8P45983 427 aa17.89■□□□□ 0.45
PDLIM3-201ENST00000284767 APOL5Q9BWW9 433 aa17.89■□□□□ 0.45
PDLIM3-201ENST00000284767 ADNPQ9H2P0 1102 aa17.89■□□□□ 0.45
PDLIM3-201ENST00000284767 CD84Q9UIB8 345 aa17.89■□□□□ 0.45
PDLIM3-201ENST00000284767 VPS9D1Q9Y2B5 631 aa17.89■□□□□ 0.45
PDLIM3-201ENST00000284767 JAK1P23458 1154 aa17.88■□□□□ 0.45
PDLIM3-201ENST00000284767 PRDX3P30048 256 aaKnown RBP17.88■□□□□ 0.45
PDLIM3-201ENST00000284767 PTSQ03393 145 aa17.88■□□□□ 0.45
PDLIM3-201ENST00000284767 ZNF846Q147U1 533 aa17.88■□□□□ 0.45
PDLIM3-201ENST00000284767 CARD16Q5EG05 197 aa17.88■□□□□ 0.45
PDLIM3-201ENST00000284767 FRA10AC1Q70Z53 315 aa17.88■□□□□ 0.45
PDLIM3-201ENST00000284767 ZFAND4Q86XD8 727 aa17.88■□□□□ 0.45
PDLIM3-201ENST00000284767 AADATQ8N5Z0 425 aa17.88■□□□□ 0.45
PDLIM3-201ENST00000284767 DCBLD1Q8N8Z6 715 aa17.88■□□□□ 0.45
PDLIM3-201ENST00000284767 OR2A12Q8NGT7 310 aa17.88■□□□□ 0.45
PDLIM3-201ENST00000284767 ESR1P03372 595 aa17.88■□□□□ 0.45
PDLIM3-201ENST00000284767 ANXA6P08133 673 aa17.88■□□□□ 0.45
PDLIM3-201ENST00000284767 IL2P60568 153 aa17.88■□□□□ 0.45
PDLIM3-201ENST00000284767 CHRNB3Q05901 458 aa17.88■□□□□ 0.45
PDLIM3-201ENST00000284767 PRKG2Q13237 762 aa17.88■□□□□ 0.45
PDLIM3-201ENST00000284767 C18orf21Q32NC0 220 aaPredicted RBP17.88■□□□□ 0.45
PDLIM3-201ENST00000284767 PTRHD1Q6GMV3 140 aaKnown RBP17.88■□□□□ 0.45
PDLIM3-201ENST00000284767 TXNDC11Q6PKC3 985 aa17.88■□□□□ 0.45
PDLIM3-201ENST00000284767 SNX20Q7Z614 316 aa17.88■□□□□ 0.45
PDLIM3-201ENST00000284767 SYVN1Q86TM6 617 aa17.88■□□□□ 0.45
PDLIM3-201ENST00000284767 STK32CQ86UX6 486 aa17.88■□□□□ 0.45
PDLIM3-201ENST00000284767 C12orf40Q86WS4 652 aa17.88■□□□□ 0.45
PDLIM3-201ENST00000284767 ABHD11Q8NFV4 315 aa17.88■□□□□ 0.45
PDLIM3-201ENST00000284767 SDCCAG3Q96C92 435 aa17.88■□□□□ 0.45
PDLIM3-201ENST00000284767 ECHDC3Q96DC8 303 aa17.88■□□□□ 0.45
PDLIM3-201ENST00000284767 PFDN6O15212 129 aa17.87■□□□□ 0.45
PDLIM3-201ENST00000284767 TRIM16O95361 564 aa17.87■□□□□ 0.45
PDLIM3-201ENST00000284767 HALP42357 657 aa17.87■□□□□ 0.45
PDLIM3-201ENST00000284767 MLLT10P55197 1068 aa17.87■□□□□ 0.45
PDLIM3-201ENST00000284767 UBE3AQ05086 875 aa17.87■□□□□ 0.45
PDLIM3-201ENST00000284767 TRIM16LQ309B1 348 aa17.87■□□□□ 0.45
PDLIM3-201ENST00000284767 UGT3A1Q6NUS8 523 aa17.87■□□□□ 0.45
PDLIM3-201ENST00000284767 ZDHHC13Q8IUH4 622 aa17.87■□□□□ 0.45
PDLIM3-201ENST00000284767 DTWD1Q8N5C7 304 aa17.87■□□□□ 0.45
PDLIM3-201ENST00000284767 NKAPQ8N5F7 415 aaKnown RBP17.87■□□□□ 0.45
PDLIM3-201ENST00000284767 FKBP10Q96AY3 582 aa17.87■□□□□ 0.45
PDLIM3-201ENST00000284767 ASIC4Q96FT7 647 aa17.87■□□□□ 0.45
PDLIM3-201ENST00000284767 SCRN2Q96FV2 425 aa17.87■□□□□ 0.45
PDLIM3-201ENST00000284767 CLPBQ9H078 707 aa17.87■□□□□ 0.45
PDLIM3-201ENST00000284767 ARMC7Q9H6L4 198 aa17.87■□□□□ 0.45
PDLIM3-201ENST00000284767 CRLS1Q9UJA2 301 aa17.87■□□□□ 0.45
PDLIM3-201ENST00000284767 PIKFYVEQ9Y2I7 2098 aa17.87■□□□□ 0.45
PDLIM3-201ENST00000284767 CLDN25C9JDP6 229 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms