RNA–Protein interactions for RNA: ENST00000274255.10

SKP2-202, Transcript of S-phase kinase associated protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKP2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-202ENST00000274255 ZDHHC4Q9NPG8 344 aa11.15□□□□□ -0.62
SKP2-202ENST00000274255 UCKL1Q9NWZ5 548 aa11.15□□□□□ -0.62
SKP2-202ENST00000274255 GPR45Q9Y5Y3 372 aa11.15□□□□□ -0.62
SKP2-202ENST00000274255 KCNE1P15382 129 aa11.15□□□□□ -0.62
SKP2-202ENST00000274255 DDX5P17844 614 aaKnown RBP11.15□□□□□ -0.62
SKP2-202ENST00000274255 MLLT10P55197 1068 aa11.15□□□□□ -0.62
SKP2-202ENST00000274255 SF3B4Q15427 424 aaKnown RBP eCLIP11.15□□□□□ -0.62
SKP2-202ENST00000274255 CHRNA6Q15825 494 aa11.15□□□□□ -0.62
SKP2-202ENST00000274255 ZNF57Q68EA5 555 aaPredicted RBP11.15□□□□□ -0.62
SKP2-202ENST00000274255 TNFAIP8L2Q6P589 184 aaPredicted RBP11.15□□□□□ -0.62
SKP2-202ENST00000274255 ARMCX6Q7L4S7 300 aa11.15□□□□□ -0.62
SKP2-202ENST00000274255 DEPDC4Q8N2C3 294 aa11.15□□□□□ -0.62
SKP2-202ENST00000274255 SH3YL1Q96HL8 342 aaPredicted RBP11.15□□□□□ -0.62
SKP2-202ENST00000274255 C1orf109Q9NX04 203 aa11.15□□□□□ -0.62
SKP2-202ENST00000274255 NHSQ6T4R5 1651 aa11.15□□□□□ -0.62
SKP2-202ENST00000274255 KIAA1217Q5T5P2 1943 aa11.15□□□□□ -0.62
SKP2-202ENST00000274255 ANKRD66B4E2M5 251 aa11.15□□□□□ -0.63
SKP2-202ENST00000274255 SLC22A2O15244 555 aa11.15□□□□□ -0.63
SKP2-202ENST00000274255 SUV39H1O43463 412 aa11.15□□□□□ -0.63
SKP2-202ENST00000274255 OR10H3O60404 316 aa11.15□□□□□ -0.63
SKP2-202ENST00000274255 PRAMEF12O95522 483 aa11.15□□□□□ -0.63
SKP2-202ENST00000274255 FCER2P06734 321 aa11.15□□□□□ -0.63
SKP2-202ENST00000274255 ALPPL2P10696 532 aa11.15□□□□□ -0.63
SKP2-202ENST00000274255 MTHFD2P13995 350 aa11.15□□□□□ -0.63
SKP2-202ENST00000274255 DGKAP23743 735 aa11.15□□□□□ -0.63
SKP2-202ENST00000274255 RRM2P31350 389 aa11.15□□□□□ -0.63
SKP2-202ENST00000274255 GPC1P35052 558 aa11.15□□□□□ -0.63
SKP2-202ENST00000274255 SOX6P35712 828 aa11.15□□□□□ -0.63
SKP2-202ENST00000274255 ZNF792Q3KQV3 632 aa11.15□□□□□ -0.63
SKP2-202ENST00000274255 INO80DQ53TQ3 878 aaPredicted RBP11.15□□□□□ -0.63
SKP2-202ENST00000274255 PM20D1Q6GTS8 502 aa11.15□□□□□ -0.63
SKP2-202ENST00000274255 KDELC1Q6UW63 502 aa11.15□□□□□ -0.63
SKP2-202ENST00000274255 MAMDC4Q6UXC1 1216 aa11.15□□□□□ -0.63
SKP2-202ENST00000274255 PTCHD4Q6ZW05 846 aa11.15□□□□□ -0.63
SKP2-202ENST00000274255 PELI3Q8N2H9 469 aa11.15□□□□□ -0.63
SKP2-202ENST00000274255 MDGA1Q8NFP4 955 aa11.15□□□□□ -0.63
SKP2-202ENST00000274255 DOK4Q8TEW6 326 aa11.15□□□□□ -0.63
SKP2-202ENST00000274255 SLC22A17Q8WUG5 538 aa11.15□□□□□ -0.63
SKP2-202ENST00000274255 ZUFSPQ96AP4 578 aa11.15□□□□□ -0.63
SKP2-202ENST00000274255 KAT8Q9H7Z6 458 aaKnown RBP11.15□□□□□ -0.63
SKP2-202ENST00000274255 PAK1IP1Q9NWT1 392 aaPredicted RBP11.15□□□□□ -0.63
SKP2-202ENST00000274255 GPR83Q9NYM4 423 aa11.15□□□□□ -0.63
SKP2-202ENST00000274255 SLC13A4Q9UKG4 626 aa11.15□□□□□ -0.63
SKP2-202ENST00000274255 SLC9A8Q9Y2E8 581 aa11.15□□□□□ -0.63
SKP2-202ENST00000274255 PCDHB7Q9Y5E2 793 aa11.15□□□□□ -0.63
SKP2-202ENST00000274255 PCDHB14Q9Y5E9 798 aa11.15□□□□□ -0.63
SKP2-202ENST00000274255 PIPSLA2A3N6 862 aa11.14□□□□□ -0.63
SKP2-202ENST00000274255 HTR3EA5X5Y0 456 aa11.14□□□□□ -0.63
SKP2-202ENST00000274255 TNFRSF11BO00300 401 aa11.14□□□□□ -0.63
SKP2-202ENST00000274255 IL6P05231 212 aa11.14□□□□□ -0.63
SKP2-202ENST00000274255 NUDT7P0C024 238 aa11.14□□□□□ -0.63
SKP2-202ENST00000274255 BMP1P13497 986 aa11.14□□□□□ -0.63
SKP2-202ENST00000274255 HRH2P25021 359 aa11.14□□□□□ -0.63
SKP2-202ENST00000274255 DCTP40126 519 aa11.14□□□□□ -0.63
SKP2-202ENST00000274255 EEFSECP57772 596 aaKnown RBP11.14□□□□□ -0.63
SKP2-202ENST00000274255 RPS26P62854 115 aaKnown RBP11.14□□□□□ -0.63
SKP2-202ENST00000274255 PDZK1Q5T2W1 519 aa11.14□□□□□ -0.63
SKP2-202ENST00000274255 LCN8Q6JVE9 175 aa11.14□□□□□ -0.63
SKP2-202ENST00000274255 Q6ZSR9 355 aa11.14□□□□□ -0.63
SKP2-202ENST00000274255 RBM23Q86U06 439 aaKnown RBP11.14□□□□□ -0.63
SKP2-202ENST00000274255 SVOPQ8N4V2 548 aa11.14□□□□□ -0.63
SKP2-202ENST00000274255 ARL14EPQ8N8R7 260 aaPredicted RBP11.14□□□□□ -0.63
SKP2-202ENST00000274255 PHF10Q8WUB8 498 aaKnown RBP11.14□□□□□ -0.63
SKP2-202ENST00000274255 SCAMP4Q969E2 229 aa11.14□□□□□ -0.63
SKP2-202ENST00000274255 OMA1Q96E52 524 aa11.14□□□□□ -0.63
SKP2-202ENST00000274255 C1GALT1C1Q96EU7 318 aa11.14□□□□□ -0.63
SKP2-202ENST00000274255 ZNF599Q96NL3 588 aa11.14□□□□□ -0.63
SKP2-202ENST00000274255 PPP1R2P1Q96PQ5 205 aa11.14□□□□□ -0.63
SKP2-202ENST00000274255 YIPF4Q9BSR8 244 aa11.14□□□□□ -0.63
SKP2-202ENST00000274255 TTPALQ9BTX7 342 aa11.14□□□□□ -0.63
SKP2-202ENST00000274255 NFKBIZQ9BYH8 718 aa11.14□□□□□ -0.63
SKP2-202ENST00000274255 MIEF1Q9NQG6 463 aa11.14□□□□□ -0.63
SKP2-202ENST00000274255 ATP6V1HQ9UI12 483 aa11.14□□□□□ -0.63
SKP2-202ENST00000274255 ABCG2Q9UNQ0 655 aa11.14□□□□□ -0.63
SKP2-202ENST00000274255 LYVE1Q9Y5Y7 322 aa11.14□□□□□ -0.63
SKP2-202ENST00000274255 SPAG17Q6Q759 2223 aa11.14□□□□□ -0.63
SKP2-202ENST00000274255 LZTS3O60299 673 aaPredicted RBP11.14□□□□□ -0.63
SKP2-202ENST00000274255 PLOD3O60568 738 aa11.14□□□□□ -0.63
SKP2-202ENST00000274255 SLC10A3P09131 477 aa11.14□□□□□ -0.63
SKP2-202ENST00000274255 GJA8P48165 433 aa11.14□□□□□ -0.63
SKP2-202ENST00000274255 HCAR3P49019 387 aa11.14□□□□□ -0.63
SKP2-202ENST00000274255 AIF1P55008 147 aa11.14□□□□□ -0.63
SKP2-202ENST00000274255 SNRPD2P62316 118 aaKnown RBP11.14□□□□□ -0.63
SKP2-202ENST00000274255 AQP6Q13520 282 aa11.14□□□□□ -0.63
SKP2-202ENST00000274255 KCNJ8Q15842 424 aa11.14□□□□□ -0.63
SKP2-202ENST00000274255 KLHL17Q6TDP4 642 aa11.14□□□□□ -0.63
SKP2-202ENST00000274255 Q6ZNX1 250 aa11.14□□□□□ -0.63
SKP2-202ENST00000274255 TMPRSS11BQ86T26 416 aa11.14□□□□□ -0.63
SKP2-202ENST00000274255 ZNF614Q8N883 585 aa11.14□□□□□ -0.63
SKP2-202ENST00000274255 CHDHQ8NE62 594 aaPredicted RBP11.14□□□□□ -0.63
SKP2-202ENST00000274255 FAM83FQ8NEG4 500 aaPredicted RBP11.14□□□□□ -0.63
SKP2-202ENST00000274255 WDR12Q9GZL7 423 aaKnown RBP11.14□□□□□ -0.63
SKP2-202ENST00000274255 FLRT1Q9NZU1 646 aa11.14□□□□□ -0.63
SKP2-202ENST00000274255 PCTPQ9UKL6 214 aa11.14□□□□□ -0.63
SKP2-202ENST00000274255 ERGIC3Q9Y282 383 aa11.14□□□□□ -0.63
SKP2-202ENST00000274255 VPS9D1Q9Y2B5 631 aa11.14□□□□□ -0.63
SKP2-202ENST00000274255 DLGAP4Q9Y2H0 992 aa11.14□□□□□ -0.63
SKP2-202ENST00000274255 FAM186AA6NE01 2351 aa11.14□□□□□ -0.63
SKP2-202ENST00000274255 LAMB2P55268 1798 aa11.14□□□□□ -0.63
SKP2-202ENST00000274255 LCHNA4D1U4 455 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms