RNA–Protein interactions for RNA: ENST00000269137.11

SS18-201, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SS18, Length 1,836 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-201ENST00000269137 LRRC56Q8IYG6 542 aaPredicted RBP13.7□□□□□ -0.22
SS18-201ENST00000269137 TBC1D21Q8IYX1 336 aa13.7□□□□□ -0.22
SS18-201ENST00000269137 FRMD1Q8N878 549 aa13.7□□□□□ -0.22
SS18-201ENST00000269137 PHC3Q8NDX5 983 aa13.7□□□□□ -0.22
SS18-201ENST00000269137 OR5AR1Q8NGP9 310 aa13.7□□□□□ -0.22
SS18-201ENST00000269137 PDXPQ96GD0 296 aa13.7□□□□□ -0.22
SS18-201ENST00000269137 ORAI3Q9BRQ5 295 aa13.7□□□□□ -0.22
SS18-201ENST00000269137 SGPP1Q9BX95 441 aa13.7□□□□□ -0.22
SS18-201ENST00000269137 TRIT1Q9H3H1 467 aaKnown RBP13.7□□□□□ -0.22
SS18-201ENST00000269137 ACTR8Q9H981 624 aa13.7□□□□□ -0.22
SS18-201ENST00000269137 GPR27Q9NS67 375 aa13.7□□□□□ -0.22
SS18-201ENST00000269137 POLG2Q9UHN1 485 aa13.7□□□□□ -0.22
SS18-201ENST00000269137 TAGLN3Q9UI15 199 aa13.7□□□□□ -0.22
SS18-201ENST00000269137 BTRCQ9Y297 605 aa13.7□□□□□ -0.22
SS18-201ENST00000269137 PLEKHM1Q9Y4G2 1056 aa13.7□□□□□ -0.22
SS18-201ENST00000269137 PTGDR2Q9Y5Y4 395 aa13.7□□□□□ -0.22
SS18-201ENST00000269137 ATP6AP2A0A1C7CYW4 349 aa13.69□□□□□ -0.22
SS18-201ENST00000269137 UBDO15205 165 aa13.69□□□□□ -0.22
SS18-201ENST00000269137 ATP6AP2O75787 350 aa13.69□□□□□ -0.22
SS18-201ENST00000269137 WFS1O76024 890 aa13.69□□□□□ -0.22
SS18-201ENST00000269137 PRR35P0CG20 571 aa13.69□□□□□ -0.22
SS18-201ENST00000269137 ERGP11308 486 aa13.69□□□□□ -0.22
SS18-201ENST00000269137 ESRRAP11474 423 aaPredicted RBP13.69□□□□□ -0.22
SS18-201ENST00000269137 RPL10P27635 214 aaKnown RBP13.69□□□□□ -0.22
SS18-201ENST00000269137 CXCL12P48061 93 aa13.69□□□□□ -0.22
SS18-201ENST00000269137 IRX1P78414 480 aaPredicted RBP13.69□□□□□ -0.22
SS18-201ENST00000269137 CTBSQ01459 385 aa13.69□□□□□ -0.22
SS18-201ENST00000269137 UAP1L1Q3KQV9 507 aa13.69□□□□□ -0.22
SS18-201ENST00000269137 CAPN13Q6MZZ7 669 aaPredicted RBP13.69□□□□□ -0.22
SS18-201ENST00000269137 OGFOD2Q6N063 350 aa13.69□□□□□ -0.22
SS18-201ENST00000269137 WASH2PQ6VEQ5 465 aa13.69□□□□□ -0.22
SS18-201ENST00000269137 SYTL1Q8IYJ3 562 aa13.69□□□□□ -0.22
SS18-201ENST00000269137 FAM160A2Q8N612 972 aaPredicted RBP13.69□□□□□ -0.22
SS18-201ENST00000269137 CADM4Q8NFZ8 388 aa13.69□□□□□ -0.22
SS18-201ENST00000269137 OR13H1Q8NG92 308 aa13.69□□□□□ -0.22
SS18-201ENST00000269137 SLC7A6OSQ96CW6 309 aaPredicted RBP13.69□□□□□ -0.22
SS18-201ENST00000269137 CMTM5Q96DZ9 223 aa13.69□□□□□ -0.22
SS18-201ENST00000269137 CATSPER2Q96P56 530 aa13.69□□□□□ -0.22
SS18-201ENST00000269137 OSGEPL1Q9H4B0 414 aa13.69□□□□□ -0.22
SS18-201ENST00000269137 WASH6PQ9NQA3 447 aa13.69□□□□□ -0.22
SS18-201ENST00000269137 RIC8BQ9NVN3 520 aa13.69□□□□□ -0.22
SS18-201ENST00000269137 TRNAU1APQ9NX07 287 aaKnown RBP13.69□□□□□ -0.22
SS18-201ENST00000269137 GPRC5BQ9NZH0 403 aa13.69□□□□□ -0.22
SS18-201ENST00000269137 KLQ9UEF7 1012 aa13.69□□□□□ -0.22
SS18-201ENST00000269137 WDR37Q9Y2I8 494 aa13.69□□□□□ -0.22
SS18-201ENST00000269137 COPG1Q9Y678 874 aaKnown RBP13.69□□□□□ -0.22
SS18-201ENST00000269137 DGKBQ9Y6T7 804 aa13.69□□□□□ -0.22
SS18-201ENST00000269137 PLXND1Q9Y4D7 1925 aa13.69□□□□□ -0.22
SS18-201ENST00000269137 KCNE1BA0A087WTH5 132 aa13.69□□□□□ -0.22
SS18-201ENST00000269137 METTL12A8MUP2 240 aa13.69□□□□□ -0.22
SS18-201ENST00000269137 E7ENX8 843 aa13.69□□□□□ -0.22
SS18-201ENST00000269137 LBPP18428 481 aa13.69□□□□□ -0.22
SS18-201ENST00000269137 ATP4BP51164 291 aa13.69□□□□□ -0.22
SS18-201ENST00000269137 PNLIPRP1P54315 467 aa13.69□□□□□ -0.22
SS18-201ENST00000269137 SRP54P61011 504 aaKnown RBP13.69□□□□□ -0.22
SS18-201ENST00000269137 TAP2Q03519 686 aa13.69□□□□□ -0.22
SS18-201ENST00000269137 E2F2Q14209 437 aa13.69□□□□□ -0.22
SS18-201ENST00000269137 PTK2BQ14289 1009 aa13.69□□□□□ -0.22
SS18-201ENST00000269137 NAA25Q14CX7 972 aa13.69□□□□□ -0.22
SS18-201ENST00000269137 TCHHL1Q5QJ38 904 aaPredicted RBP13.69□□□□□ -0.22
SS18-201ENST00000269137 LIPJQ5W064 366 aa13.69□□□□□ -0.22
SS18-201ENST00000269137 USP7Q93009 1102 aa13.69□□□□□ -0.22
SS18-201ENST00000269137 TSACCQ96A04 125 aaPredicted RBP13.69□□□□□ -0.22
SS18-201ENST00000269137 KLHL29Q96CT2 875 aa13.69□□□□□ -0.22
SS18-201ENST00000269137 TUBGCP3Q96CW5 907 aa13.69□□□□□ -0.22
SS18-201ENST00000269137 MED8Q96G25 268 aa13.69□□□□□ -0.22
SS18-201ENST00000269137 OR4K3Q96R72 315 aa13.69□□□□□ -0.22
SS18-201ENST00000269137 INSM2Q96T92 566 aaPredicted RBP13.69□□□□□ -0.22
SS18-201ENST00000269137 LRMDAQ9H2I8 198 aa13.69□□□□□ -0.22
SS18-201ENST00000269137 CIDEBQ9UHD4 219 aa13.69□□□□□ -0.22
SS18-201ENST00000269137 KCNE2Q9Y6J6 123 aa13.69□□□□□ -0.22
SS18-201ENST00000269137 KNL1Q8NG31 2342 aa13.69□□□□□ -0.22
SS18-201ENST00000269137 MANBAO00462 879 aa13.68□□□□□ -0.22
SS18-201ENST00000269137 PRAMEF4O60810 478 aa13.68□□□□□ -0.22
SS18-201ENST00000269137 NDUFS2O75306 463 aa13.68□□□□□ -0.22
SS18-201ENST00000269137 ULK1O75385 1050 aa13.68□□□□□ -0.22
SS18-201ENST00000269137 KRT6AP02538 564 aa13.68□□□□□ -0.22
SS18-201ENST00000269137 KRT6BP04259 564 aa13.68□□□□□ -0.22
SS18-201ENST00000269137 CCND1P24385 295 aa13.68□□□□□ -0.22
SS18-201ENST00000269137 PTPN4P29074 926 aa13.68□□□□□ -0.22
SS18-201ENST00000269137 CASP2P42575 452 aa13.68□□□□□ -0.22
SS18-201ENST00000269137 KRT6CP48668 564 aa13.68□□□□□ -0.22
SS18-201ENST00000269137 HTR6P50406 440 aa13.68□□□□□ -0.22
SS18-201ENST00000269137 MNAT1P51948 309 aa13.68□□□□□ -0.22
SS18-201ENST00000269137 ZXDAP98168 799 aa13.68□□□□□ -0.22
SS18-201ENST00000269137 SQLEQ14534 574 aa13.68□□□□□ -0.22
SS18-201ENST00000269137 CYP2A13Q16696 494 aa13.68□□□□□ -0.22
SS18-201ENST00000269137 ALG11Q2TAA5 492 aa13.68□□□□□ -0.22
SS18-201ENST00000269137 PRAMEF9Q5VWM5 478 aa13.68□□□□□ -0.22
SS18-201ENST00000269137 IL27RAQ6UWB1 636 aa13.68□□□□□ -0.22
SS18-201ENST00000269137 ABRAXAS1Q6UWZ7 409 aa13.68□□□□□ -0.22
SS18-201ENST00000269137 Q6ZSR9 355 aa13.68□□□□□ -0.22
SS18-201ENST00000269137 TRIM46Q7Z4K8 759 aa13.68□□□□□ -0.22
SS18-201ENST00000269137 SPATA19Q7Z5L4 167 aa13.68□□□□□ -0.22
SS18-201ENST00000269137 RGL4Q8IZJ4 473 aa13.68□□□□□ -0.22
SS18-201ENST00000269137 SLC22A18ASQ8N1D0 253 aa13.68□□□□□ -0.22
SS18-201ENST00000269137 SETD7Q8WTS6 366 aaKnown RBP13.68□□□□□ -0.22
SS18-201ENST00000269137 C12orf66Q96MD2 445 aa13.68□□□□□ -0.22
SS18-201ENST00000269137 MIPEPQ99797 713 aa13.68□□□□□ -0.22
SS18-201ENST00000269137 CD320Q9NPF0 282 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms