RNA–Protein interactions for RNA: ENST00000266661.8

BEST3-201, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,876 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-201ENST00000266661 CSKP41240 450 aa12.15□□□□□ -0.46
BEST3-201ENST00000266661 MAGEA2P43356 314 aa12.15□□□□□ -0.46
BEST3-201ENST00000266661 PLA2G16P53816 162 aa12.15□□□□□ -0.46
BEST3-201ENST00000266661 CLDN8P56748 225 aa12.15□□□□□ -0.46
BEST3-201ENST00000266661 ZXDBP98169 803 aa12.15□□□□□ -0.46
BEST3-201ENST00000266661 LAPTM5Q13571 262 aa12.15□□□□□ -0.46
BEST3-201ENST00000266661 CHRNA6Q15825 494 aa12.15□□□□□ -0.46
BEST3-201ENST00000266661 MEP1AQ16819 746 aa12.15□□□□□ -0.46
BEST3-201ENST00000266661 ZNF691Q5VV52 312 aa12.15□□□□□ -0.46
BEST3-201ENST00000266661 FAM109BQ6ICB4 259 aaPredicted RBP12.15□□□□□ -0.46
BEST3-201ENST00000266661 TTC23LQ6PF05 361 aa12.15□□□□□ -0.46
BEST3-201ENST00000266661 SLC16A12Q6ZSM3 486 aa12.15□□□□□ -0.46
BEST3-201ENST00000266661 ZNF551Q7Z340 670 aaPredicted RBP12.15□□□□□ -0.46
BEST3-201ENST00000266661 HOMEZQ8IX15 550 aa12.15□□□□□ -0.46
BEST3-201ENST00000266661 RAB2BQ8WUD1 216 aa12.15□□□□□ -0.46
BEST3-201ENST00000266661 PLEKHA8Q96JA3 519 aa12.15□□□□□ -0.46
BEST3-201ENST00000266661 ACPTQ9BZG2 426 aa12.15□□□□□ -0.46
BEST3-201ENST00000266661 PAK1IP1Q9NWT1 392 aaPredicted RBP12.15□□□□□ -0.46
BEST3-201ENST00000266661 C1orf109Q9NX04 203 aa12.15□□□□□ -0.46
BEST3-201ENST00000266661 RHBDL2Q9NX52 303 aa12.15□□□□□ -0.46
BEST3-201ENST00000266661 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.15□□□□□ -0.46
BEST3-201ENST00000266661 ZNF510Q9Y2H8 683 aa12.15□□□□□ -0.46
BEST3-201ENST00000266661 PCDHB14Q9Y5E9 798 aa12.15□□□□□ -0.46
BEST3-201ENST00000266661 GRXCR1A8MXD5 290 aa12.14□□□□□ -0.47
BEST3-201ENST00000266661 H0Y626 953 aa12.14□□□□□ -0.47
BEST3-201ENST00000266661 GSTA4O15217 222 aa12.14□□□□□ -0.47
BEST3-201ENST00000266661 NOBOXO60393 691 aa12.14□□□□□ -0.47
BEST3-201ENST00000266661 SEC22BO75396 215 aa12.14□□□□□ -0.47
BEST3-201ENST00000266661 CLDN7O95471 211 aa12.14□□□□□ -0.47
BEST3-201ENST00000266661 CXCL10P02778 98 aa12.14□□□□□ -0.47
BEST3-201ENST00000266661 HOXB6P17509 224 aaKnown RBP12.14□□□□□ -0.47
BEST3-201ENST00000266661 ITIH1P19827 911 aa12.14□□□□□ -0.47
BEST3-201ENST00000266661 ITGALP20701 1170 aa12.14□□□□□ -0.47
BEST3-201ENST00000266661 RYKP34925 604 aa12.14□□□□□ -0.47
BEST3-201ENST00000266661 HNF1BP35680 557 aa12.14□□□□□ -0.47
BEST3-201ENST00000266661 ARL1P40616 181 aaPredicted RBP12.14□□□□□ -0.47
BEST3-201ENST00000266661 KCNC4Q03721 635 aa12.14□□□□□ -0.47
BEST3-201ENST00000266661 TMED1Q13445 227 aa12.14□□□□□ -0.47
BEST3-201ENST00000266661 GBX1Q14549 363 aa12.14□□□□□ -0.47
BEST3-201ENST00000266661 GPR33Q49SQ1 333 aa12.14□□□□□ -0.47
BEST3-201ENST00000266661 CACHD1Q5VU97 1274 aa12.14□□□□□ -0.47
BEST3-201ENST00000266661 ZNF554Q86TJ5 538 aa12.14□□□□□ -0.47
BEST3-201ENST00000266661 ZSWIM9Q86XI8 627 aa12.14□□□□□ -0.47
BEST3-201ENST00000266661 DCP2Q8IU60 420 aaKnown RBP12.14□□□□□ -0.47
BEST3-201ENST00000266661 PHACTR4Q8IZ21 702 aa12.14□□□□□ -0.47
BEST3-201ENST00000266661 ZCCHC7Q8N3Z6 543 aaKnown RBP12.14□□□□□ -0.47
BEST3-201ENST00000266661 NETO1Q8TDF5 533 aa12.14□□□□□ -0.47
BEST3-201ENST00000266661 POP5Q969H6 163 aaKnown RBP12.14□□□□□ -0.47
BEST3-201ENST00000266661 ZNF566Q969W8 418 aa12.14□□□□□ -0.47
BEST3-201ENST00000266661 MAGED4Q96JG8 741 aa12.14□□□□□ -0.47
BEST3-201ENST00000266661 LYSMD1Q96S90 227 aa12.14□□□□□ -0.47
BEST3-201ENST00000266661 ING2Q9H160 280 aa12.14□□□□□ -0.47
BEST3-201ENST00000266661 PALMDQ9NP74 551 aa12.14□□□□□ -0.47
BEST3-201ENST00000266661 VNN3Q9NY84 501 aa12.14□□□□□ -0.47
BEST3-201ENST00000266661 WWOXQ9NZC7 414 aa12.14□□□□□ -0.47
BEST3-201ENST00000266661 FBXO10Q9UK96 956 aa12.14□□□□□ -0.47
BEST3-201ENST00000266661 PDE10AQ9Y233 779 aa12.14□□□□□ -0.47
BEST3-201ENST00000266661 DLGAP4Q9Y2H0 992 aa12.14□□□□□ -0.47
BEST3-201ENST00000266661 PCDHGB1Q9Y5G3 927 aa12.14□□□□□ -0.47
BEST3-201ENST00000266661 SERTM1A2A2V5 107 aa12.14□□□□□ -0.47
BEST3-201ENST00000266661 C16orf96A6NNT2 1141 aa12.14□□□□□ -0.47
BEST3-201ENST00000266661 SOBPA7XYQ1 873 aa12.14□□□□□ -0.47
BEST3-201ENST00000266661 ZBBXA8MT70 800 aa12.14□□□□□ -0.47
BEST3-201ENST00000266661 M0QX08 132 aa12.14□□□□□ -0.47
BEST3-201ENST00000266661 GMNNO75496 209 aa12.14□□□□□ -0.47
BEST3-201ENST00000266661 DNAJB5O75953 348 aa12.14□□□□□ -0.47
BEST3-201ENST00000266661 TRIM16O95361 564 aa12.14□□□□□ -0.47
BEST3-201ENST00000266661 FGBP02675 491 aa12.14□□□□□ -0.47
BEST3-201ENST00000266661 EPB42P16452 691 aa12.14□□□□□ -0.47
BEST3-201ENST00000266661 AGXTP21549 392 aa12.14□□□□□ -0.47
BEST3-201ENST00000266661 PTPN5P54829 565 aa12.14□□□□□ -0.47
BEST3-201ENST00000266661 DEFB103AP81534 67 aa12.14□□□□□ -0.47
BEST3-201ENST00000266661 PPIGQ13427 754 aaKnown RBP eCLIP12.14□□□□□ -0.47
BEST3-201ENST00000266661 TOP3AQ13472 1001 aaPredicted RBP12.14□□□□□ -0.47
BEST3-201ENST00000266661 AQP6Q13520 282 aa12.14□□□□□ -0.47
BEST3-201ENST00000266661 GGTA1PQ4G0N0 100 aa12.14□□□□□ -0.47
BEST3-201ENST00000266661 MBOAT1Q6ZNC8 495 aa12.14□□□□□ -0.47
BEST3-201ENST00000266661 ADGRG2Q8IZP9 1017 aa12.14□□□□□ -0.47
BEST3-201ENST00000266661 APCDD1Q8J025 514 aa12.14□□□□□ -0.47
BEST3-201ENST00000266661 NXPE1Q8N323 547 aa12.14□□□□□ -0.47
BEST3-201ENST00000266661 HJURPQ8NCD3 748 aaPredicted RBP12.14□□□□□ -0.47
BEST3-201ENST00000266661 FRS2Q8WU20 508 aa12.14□□□□□ -0.47
BEST3-201ENST00000266661 TRUB1Q8WWH5 349 aaKnown RBP12.14□□□□□ -0.47
BEST3-201ENST00000266661 OR52E6Q96RD3 313 aa12.14□□□□□ -0.47
BEST3-201ENST00000266661 SLC22A12Q96S37 553 aa12.14□□□□□ -0.47
BEST3-201ENST00000266661 EGFL8Q99944 293 aa12.14□□□□□ -0.47
BEST3-201ENST00000266661 TBCDQ9BTW9 1192 aa12.14□□□□□ -0.47
BEST3-201ENST00000266661 MRPL9Q9BYD2 267 aaKnown RBP12.14□□□□□ -0.47
BEST3-201ENST00000266661 GABARAPL1Q9H0R8 117 aa12.14□□□□□ -0.47
BEST3-201ENST00000266661 ANAPC1Q9H1A4 1944 aa12.14□□□□□ -0.47
BEST3-201ENST00000266661 ZFP14Q9HCL3 533 aa12.14□□□□□ -0.47
BEST3-201ENST00000266661 PPT2Q9UMR5 302 aa12.14□□□□□ -0.47
BEST3-201ENST00000266661 COLQQ9Y215 455 aaPredicted RBP12.14□□□□□ -0.47
BEST3-201ENST00000266661 INVSQ9Y283 1065 aa12.14□□□□□ -0.47
BEST3-201ENST00000266661 CORINQ9Y5Q5 1042 aa12.14□□□□□ -0.47
BEST3-201ENST00000266661 KIAA1671Q9BY89 1806 aa12.13□□□□□ -0.47
BEST3-201ENST00000266661 GLYATL1P3A0A0U1RQE8 302 aa12.13□□□□□ -0.47
BEST3-201ENST00000266661 C1orf232A0A0U1RR37 186 aa12.13□□□□□ -0.47
BEST3-201ENST00000266661 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.13□□□□□ -0.47
BEST3-201ENST00000266661 LOC100130705A0A1B0GUX0 176 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms