RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 PID1Q7Z2X4 250 aa8.58□□□□□ -1.04
VAPB-201ENST00000265619 LAX1Q8IWV1 398 aa8.58□□□□□ -1.04
VAPB-201ENST00000265619 OR10T2Q8NGX3 314 aa8.58□□□□□ -1.04
VAPB-201ENST00000265619 ASB15Q8WXK1 588 aa8.58□□□□□ -1.04
VAPB-201ENST00000265619 RHBDF1Q96CC6 855 aa8.58□□□□□ -1.04
VAPB-201ENST00000265619 ZNF670Q9BS34 389 aa8.58□□□□□ -1.04
VAPB-201ENST00000265619 CDT1Q9H211 546 aa8.58□□□□□ -1.04
VAPB-201ENST00000265619 GHITMQ9H3K2 345 aa8.58□□□□□ -1.04
VAPB-201ENST00000265619 GOLGA2P5Q9HBQ8 144 aa8.58□□□□□ -1.04
VAPB-201ENST00000265619 CYB5R1Q9UHQ9 305 aa8.58□□□□□ -1.04
VAPB-201ENST00000265619 GMEB2Q9UKD1 530 aa8.58□□□□□ -1.04
VAPB-201ENST00000265619 LYVE1Q9Y5Y7 322 aa8.58□□□□□ -1.04
VAPB-201ENST00000265619 HSPE1-MOB4S4R3N1 261 aa8.58□□□□□ -1.04
VAPB-201ENST00000265619 BBIP1A8MTZ0 92 aa8.58□□□□□ -1.04
VAPB-201ENST00000265619 ZNF254O75437 659 aa8.58□□□□□ -1.04
VAPB-201ENST00000265619 UMPSP11172 480 aa8.58□□□□□ -1.04
VAPB-201ENST00000265619 ATP5F1P24539 256 aaPredicted RBP8.58□□□□□ -1.04
VAPB-201ENST00000265619 RYKP34925 604 aa8.58□□□□□ -1.04
VAPB-201ENST00000265619 CTSKP43235 329 aa8.58□□□□□ -1.04
VAPB-201ENST00000265619 BRCC3P46736 316 aa8.58□□□□□ -1.04
VAPB-201ENST00000265619 NPY2RP49146 381 aa8.58□□□□□ -1.04
VAPB-201ENST00000265619 PRIM2P49643 509 aa8.58□□□□□ -1.04
VAPB-201ENST00000265619 TARBP2Q15633 366 aaKnown RBP8.58□□□□□ -1.04
VAPB-201ENST00000265619 DDR2Q16832 855 aa8.58□□□□□ -1.04
VAPB-201ENST00000265619 TECRLQ5HYJ1 363 aa8.58□□□□□ -1.04
VAPB-201ENST00000265619 TOR1AIP1Q5JTV8 583 aa8.58□□□□□ -1.04
VAPB-201ENST00000265619 JADE1Q6IE81 842 aa8.58□□□□□ -1.04
VAPB-201ENST00000265619 LETMD1Q6P1Q0 360 aa8.58□□□□□ -1.04
VAPB-201ENST00000265619 PRMT9Q6P2P2 845 aa8.58□□□□□ -1.04
VAPB-201ENST00000265619 METTL3Q86U44 580 aaKnown RBP8.58□□□□□ -1.04
VAPB-201ENST00000265619 BCL7CQ8WUZ0 217 aaPredicted RBP8.58□□□□□ -1.04
VAPB-201ENST00000265619 APH1BQ8WW43 257 aa8.58□□□□□ -1.04
VAPB-201ENST00000265619 NXPE3Q969Y0 559 aa8.58□□□□□ -1.04
VAPB-201ENST00000265619 TSNARE1Q96NA8 513 aa8.58□□□□□ -1.04
VAPB-201ENST00000265619 MRPL57Q9BQC6 102 aaKnown RBP8.58□□□□□ -1.04
VAPB-201ENST00000265619 ITPAQ9BY32 194 aa8.58□□□□□ -1.04
VAPB-201ENST00000265619 UGT2B28Q9BY64 529 aa8.58□□□□□ -1.04
VAPB-201ENST00000265619 FAM126AQ9BYI3 521 aaPredicted RBP8.58□□□□□ -1.04
VAPB-201ENST00000265619 BARHL1Q9BZE3 327 aa8.58□□□□□ -1.04
VAPB-201ENST00000265619 RHOJQ9H4E5 214 aa8.58□□□□□ -1.04
VAPB-201ENST00000265619 IKZF5Q9H5V7 419 aa8.58□□□□□ -1.04
VAPB-201ENST00000265619 ABCB8Q9NUT2 735 aa8.58□□□□□ -1.04
VAPB-201ENST00000265619 B3GNT2Q9NY97 397 aa8.58□□□□□ -1.04
VAPB-201ENST00000265619 MID2Q9UJV3 735 aa8.58□□□□□ -1.04
VAPB-201ENST00000265619 OGDHLQ9ULD0 1010 aa8.58□□□□□ -1.04
VAPB-201ENST00000265619 USP3Q9Y6I4 520 aa8.58□□□□□ -1.04
VAPB-201ENST00000265619 LCTP09848 1927 aa8.57□□□□□ -1.04
VAPB-201ENST00000265619 MYO9BQ13459 2157 aa8.57□□□□□ -1.04
VAPB-201ENST00000265619 LACTBL1A8MY62 500 aa8.57□□□□□ -1.04
VAPB-201ENST00000265619 MSCO60682 206 aa8.57□□□□□ -1.04
VAPB-201ENST00000265619 SLC22A5O76082 557 aa8.57□□□□□ -1.04
VAPB-201ENST00000265619 IPO13O94829 963 aaKnown RBP8.57□□□□□ -1.04
VAPB-201ENST00000265619 CTGFP29279 349 aa8.57□□□□□ -1.04
VAPB-201ENST00000265619 ERP29P30040 261 aaKnown RBP8.57□□□□□ -1.04
VAPB-201ENST00000265619 CXCR3P49682 368 aa8.57□□□□□ -1.04
VAPB-201ENST00000265619 EFNA5P52803 228 aa8.57□□□□□ -1.04
VAPB-201ENST00000265619 AANATQ16613 207 aa8.57□□□□□ -1.04
VAPB-201ENST00000265619 SPDYE7PQ495Y7 208 aa8.57□□□□□ -1.04
VAPB-201ENST00000265619 ZBTB37Q5TC79 503 aa8.57□□□□□ -1.04
VAPB-201ENST00000265619 BTN2A1Q7KYR7 527 aa8.57□□□□□ -1.04
VAPB-201ENST00000265619 OTOP2Q7RTS6 562 aa8.57□□□□□ -1.04
VAPB-201ENST00000265619 PPTC7Q8NI37 304 aa8.57□□□□□ -1.04
VAPB-201ENST00000265619 ISG20Q96AZ6 181 aaKnown RBP8.57□□□□□ -1.04
VAPB-201ENST00000265619 SIGLEC11Q96RL6 698 aa8.57□□□□□ -1.04
VAPB-201ENST00000265619 SLC30A2Q9BRI3 323 aa8.57□□□□□ -1.04
VAPB-201ENST00000265619 C16orf70Q9BSU1 422 aa8.57□□□□□ -1.04
VAPB-201ENST00000265619 IER2Q9BTL4 223 aa8.57□□□□□ -1.04
VAPB-201ENST00000265619 PPIL3Q9H2H8 161 aaKnown RBP8.57□□□□□ -1.04
VAPB-201ENST00000265619 PRDM12Q9H4Q4 367 aa8.57□□□□□ -1.04
VAPB-201ENST00000265619 CATSPERBQ9H7T0 1116 aa8.57□□□□□ -1.04
VAPB-201ENST00000265619 BFARQ9NZS9 450 aa8.57□□□□□ -1.04
VAPB-201ENST00000265619 POLG2Q9UHN1 485 aa8.57□□□□□ -1.04
VAPB-201ENST00000265619 TRMT6Q9UJA5 497 aaKnown RBP8.57□□□□□ -1.04
VAPB-201ENST00000265619 ANKRD6Q9Y2G4 727 aa8.57□□□□□ -1.04
VAPB-201ENST00000265619 KCNE2Q9Y6J6 123 aa8.57□□□□□ -1.04
VAPB-201ENST00000265619 GNGT2O14610 69 aa8.57□□□□□ -1.04
VAPB-201ENST00000265619 BET1O15155 118 aa8.57□□□□□ -1.04
VAPB-201ENST00000265619 DIRAS1O95057 198 aa8.57□□□□□ -1.04
VAPB-201ENST00000265619 HPRP00739 348 aa8.57□□□□□ -1.04
VAPB-201ENST00000265619 KELP23276 732 aa8.57□□□□□ -1.04
VAPB-201ENST00000265619 PIK3CBP42338 1070 aa8.57□□□□□ -1.04
VAPB-201ENST00000265619 LIMK1P53667 647 aa8.57□□□□□ -1.04
VAPB-201ENST00000265619 UGT2B15P54855 530 aa8.57□□□□□ -1.04
VAPB-201ENST00000265619 FKBP1BP68106 108 aa8.57□□□□□ -1.04
VAPB-201ENST00000265619 PITX1P78337 314 aaPredicted RBP8.57□□□□□ -1.04
VAPB-201ENST00000265619 CREMQ03060 361 aa8.57□□□□□ -1.04
VAPB-201ENST00000265619 DUOXA2Q1HG44 320 aa8.57□□□□□ -1.04
VAPB-201ENST00000265619 UNC50Q53HI1 259 aa8.57□□□□□ -1.04
VAPB-201ENST00000265619 MPZL3Q6UWV2 235 aa8.57□□□□□ -1.04
VAPB-201ENST00000265619 SLC26A9Q7LBE3 791 aa8.57□□□□□ -1.04
VAPB-201ENST00000265619 COMMD7Q86VX2 200 aa8.57□□□□□ -1.04
VAPB-201ENST00000265619 C10orf111Q8N326 155 aa8.57□□□□□ -1.04
VAPB-201ENST00000265619 TTC16Q8NEE8 873 aa8.57□□□□□ -1.04
VAPB-201ENST00000265619 AKAP1Q92667 903 aaKnown RBP eCLIP8.57□□□□□ -1.044e-9■■■■■ 30.8
VAPB-201ENST00000265619 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.57□□□□□ -1.04
VAPB-201ENST00000265619 TUBGCP3Q96CW5 907 aa8.57□□□□□ -1.04
VAPB-201ENST00000265619 RADILQ96JH8 1075 aa8.57□□□□□ -1.04
VAPB-201ENST00000265619 KATNAL1Q9BW62 490 aa8.57□□□□□ -1.04
VAPB-201ENST00000265619 SORBS1Q9BX66 1292 aaKnown RBP8.57□□□□□ -1.04
VAPB-201ENST00000265619 TRIM54Q9BYV2 358 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms