RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 C17orf99Q6UX52 265 aa13.69□□□□□ -0.22
CDH3-201ENST00000264012 BEND5Q7L4P6 421 aa13.69□□□□□ -0.22
CDH3-201ENST00000264012 GOLGA7Q7Z5G4 137 aa13.69□□□□□ -0.22
CDH3-201ENST00000264012 LRRTM4Q86VH4 590 aa13.69□□□□□ -0.22
CDH3-201ENST00000264012 OR9I1Q8NGQ6 314 aa13.69□□□□□ -0.22
CDH3-201ENST00000264012 SIPA1Q96FS4 1042 aa13.69□□□□□ -0.22
CDH3-201ENST00000264012 SLC35G5Q96KT7 338 aa13.69□□□□□ -0.22
CDH3-201ENST00000264012 IL12RB2Q99665 862 aa13.69□□□□□ -0.22
CDH3-201ENST00000264012 SLC29A3Q9BZD2 475 aa13.69□□□□□ -0.22
CDH3-201ENST00000264012 ZSCAN32Q9NX65 697 aa13.69□□□□□ -0.22
CDH3-201ENST00000264012 RNF186Q9NXI6 227 aa13.69□□□□□ -0.22
CDH3-201ENST00000264012 DNAJB9Q9UBS3 223 aa13.69□□□□□ -0.22
CDH3-201ENST00000264012 H3BNX3 289 aa13.69□□□□□ -0.22
CDH3-201ENST00000264012 MATN2O00339 956 aa13.69□□□□□ -0.22
CDH3-201ENST00000264012 MMP20O60882 483 aa13.69□□□□□ -0.22
CDH3-201ENST00000264012 CLCNKAP51800 687 aa13.69□□□□□ -0.22
CDH3-201ENST00000264012 PTPN5P54829 565 aa13.69□□□□□ -0.22
CDH3-201ENST00000264012 LRRC32Q14392 662 aa13.69□□□□□ -0.22
CDH3-201ENST00000264012 PTCHD3Q3KNS1 767 aa13.69□□□□□ -0.22
CDH3-201ENST00000264012 MBOAT1Q6ZNC8 495 aa13.69□□□□□ -0.22
CDH3-201ENST00000264012 AHSA2Q719I0 299 aa13.69□□□□□ -0.22
CDH3-201ENST00000264012 POC5Q8NA72 575 aa13.69□□□□□ -0.22
CDH3-201ENST00000264012 PPP1R14AQ96A00 147 aa13.69□□□□□ -0.22
CDH3-201ENST00000264012 MRGPRX2Q96LB1 330 aa13.69□□□□□ -0.22
CDH3-201ENST00000264012 KAT6AQ92794 2004 aa13.69□□□□□ -0.22
CDH3-201ENST00000264012 IRGMA1A4Y4 181 aa13.69□□□□□ -0.22
CDH3-201ENST00000264012 MCIDASD6RGH6 385 aa13.69□□□□□ -0.22
CDH3-201ENST00000264012 CPN2P22792 545 aa13.69□□□□□ -0.22
CDH3-201ENST00000264012 MYL9P24844 172 aa13.69□□□□□ -0.22
CDH3-201ENST00000264012 TGFBIQ15582 683 aa13.69□□□□□ -0.22
CDH3-201ENST00000264012 ZSWIM7Q19AV6 140 aa13.69□□□□□ -0.22
CDH3-201ENST00000264012 ZNF598Q86UK7 904 aaKnown RBP13.69□□□□□ -0.22
CDH3-201ENST00000264012 SAMD14Q8IZD0 417 aaPredicted RBP13.69□□□□□ -0.22
CDH3-201ENST00000264012 ALDOAP04075 364 aaKnown RBP13.69□□□□□ -0.22
CDH3-201ENST00000264012 APLP1P51693 650 aa13.69□□□□□ -0.22
CDH3-201ENST00000264012 ENPP7Q6UWV6 458 aa13.69□□□□□ -0.22
CDH3-201ENST00000264012 NUDT13Q86X67 352 aa13.69□□□□□ -0.22
CDH3-201ENST00000264012 GJD3Q8N144 294 aa13.69□□□□□ -0.22
CDH3-201ENST00000264012 CADM2Q8N3J6 435 aa13.69□□□□□ -0.22
CDH3-201ENST00000264012 C1orf52Q8N6N3 182 aaKnown RBP13.69□□□□□ -0.22
CDH3-201ENST00000264012 CANT1Q8WVQ1 401 aa13.69□□□□□ -0.22
CDH3-201ENST00000264012 S100ZQ8WXG8 99 aa13.69□□□□□ -0.22
CDH3-201ENST00000264012 SLC38A3Q99624 504 aa13.69□□□□□ -0.22
CDH3-201ENST00000264012 CLDND1Q9NY35 253 aa13.69□□□□□ -0.22
CDH3-201ENST00000264012 NAV1Q8NEY1 1877 aa13.69□□□□□ -0.22
CDH3-201ENST00000264012 SETD1AO15047 1707 aaKnown RBP13.69□□□□□ -0.22
CDH3-201ENST00000264012 RHPN2P1A8MT19 583 aa13.68□□□□□ -0.22
CDH3-201ENST00000264012 PITPNM1O00562 1244 aa13.68□□□□□ -0.22
CDH3-201ENST00000264012 CCNB2O95067 398 aa13.68□□□□□ -0.22
CDH3-201ENST00000264012 CYBAP13498 195 aa13.68□□□□□ -0.22
CDH3-201ENST00000264012 POU2F1P14859 743 aa13.68□□□□□ -0.22
CDH3-201ENST00000264012 RYKP34925 604 aa13.68□□□□□ -0.22
CDH3-201ENST00000264012 NUP62P37198 522 aaPredicted RBP13.68□□□□□ -0.22
CDH3-201ENST00000264012 CAPGP40121 348 aa13.68□□□□□ -0.22
CDH3-201ENST00000264012 IRF5Q13568 498 aa13.68□□□□□ -0.22
CDH3-201ENST00000264012 NDUFAF6Q330K2 333 aa13.68□□□□□ -0.22
CDH3-201ENST00000264012 PIK3R6Q5UE93 754 aa13.68□□□□□ -0.22
CDH3-201ENST00000264012 MZT2BQ6NZ67 158 aa13.68□□□□□ -0.22
CDH3-201ENST00000264012 CXXC5Q7LFL8 322 aaKnown RBP13.68□□□□□ -0.22
CDH3-201ENST00000264012 NXPE1Q8N323 547 aa13.68□□□□□ -0.22
CDH3-201ENST00000264012 TTC29Q8NA56 475 aaPredicted RBP13.68□□□□□ -0.22
CDH3-201ENST00000264012 HM13Q8TCT9 377 aa13.68□□□□□ -0.22
CDH3-201ENST00000264012 GTPBP3Q969Y2 492 aaKnown RBP13.68□□□□□ -0.22
CDH3-201ENST00000264012 C1GALT1C1Q96EU7 318 aa13.68□□□□□ -0.22
CDH3-201ENST00000264012 HERPUD2Q9BSE4 406 aa13.68□□□□□ -0.22
CDH3-201ENST00000264012 E7ENX8 843 aa13.68□□□□□ -0.22
CDH3-201ENST00000264012 MAFKO60675 156 aa13.68□□□□□ -0.22
CDH3-201ENST00000264012 MATN4O95460 622 aa13.68□□□□□ -0.22
CDH3-201ENST00000264012 FGF3P11487 239 aaPredicted RBP13.68□□□□□ -0.22
CDH3-201ENST00000264012 ZNF24P17028 368 aa13.68□□□□□ -0.22
CDH3-201ENST00000264012 GGT5P36269 586 aa13.68□□□□□ -0.22
CDH3-201ENST00000264012 SEMA3AQ14563 771 aa13.68□□□□□ -0.22
CDH3-201ENST00000264012 TXNDC5Q8NBS9 432 aaKnown RBP13.68□□□□□ -0.22
CDH3-201ENST00000264012 FEM1AQ9BSK4 669 aa13.68□□□□□ -0.22
CDH3-201ENST00000264012 MYH10P35580 1976 aa13.68□□□□□ -0.22
CDH3-201ENST00000264012 MBLAC1A4D2B0 266 aaPredicted RBP13.68□□□□□ -0.22
CDH3-201ENST00000264012 ZNF840PA6NDX5 716 aa13.68□□□□□ -0.22
CDH3-201ENST00000264012 BHMG1C9JSJ3 638 aaPredicted RBP13.68□□□□□ -0.22
CDH3-201ENST00000264012 CKMT2P17540 419 aa13.68□□□□□ -0.22
CDH3-201ENST00000264012 BDKRB1P46663 353 aa13.68□□□□□ -0.22
CDH3-201ENST00000264012 NRIP1P48552 1158 aa13.68□□□□□ -0.22
CDH3-201ENST00000264012 BLKP51451 505 aa13.68□□□□□ -0.22
CDH3-201ENST00000264012 RTP2Q5QGT7 225 aa13.68□□□□□ -0.22
CDH3-201ENST00000264012 DDI2Q5TDH0 399 aa13.68□□□□□ -0.22
CDH3-201ENST00000264012 PDE12Q6L8Q7 609 aaKnown RBP13.68□□□□□ -0.22
CDH3-201ENST00000264012 Q6ZVL8 140 aa13.68□□□□□ -0.22
CDH3-201ENST00000264012 THOC6Q86W42 341 aaKnown RBP13.68□□□□□ -0.22
CDH3-201ENST00000264012 ZZZ3Q8IYH5 903 aa13.68□□□□□ -0.22
CDH3-201ENST00000264012 GPR65Q8IYL9 337 aa13.68□□□□□ -0.22
CDH3-201ENST00000264012 TTLQ8NG68 377 aa13.68□□□□□ -0.22
CDH3-201ENST00000264012 MCFD2Q8NI22 146 aa13.68□□□□□ -0.22
CDH3-201ENST00000264012 IRF7Q92985 503 aa13.68□□□□□ -0.22
CDH3-201ENST00000264012 RACGAP1Q9H0H5 632 aa13.68□□□□□ -0.22
CDH3-201ENST00000264012 ZBTB26Q9HCK0 441 aa13.68□□□□□ -0.22
CDH3-201ENST00000264012 ZCCHC3Q9NUD5 404 aaKnown RBP13.68□□□□□ -0.22
CDH3-201ENST00000264012 CMTM6Q9NX76 183 aa13.68□□□□□ -0.22
CDH3-201ENST00000264012 MAP10Q9P2G4 905 aa13.68□□□□□ -0.22
CDH3-201ENST00000264012 SPATA2Q9UM82 520 aa13.68□□□□□ -0.22
CDH3-201ENST00000264012 UBR2Q8IWV8 1755 aa13.68□□□□□ -0.22
CDH3-201ENST00000264012 ARPC2O15144 300 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms