RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 IFNL1Q8IU54 200 aa8.91□□□□□ -0.98
MSH4-201ENST00000263187 DCP2Q8IU60 420 aaKnown RBP8.91□□□□□ -0.98
MSH4-201ENST00000263187 ZDHHC21Q8IVQ6 265 aa8.91□□□□□ -0.98
MSH4-201ENST00000263187 MICU2Q8IYU8 434 aa8.91□□□□□ -0.98
MSH4-201ENST00000263187 FBXO22Q8NEZ5 403 aa8.91□□□□□ -0.98
MSH4-201ENST00000263187 OR7A2PQ8NGA2 310 aa8.91□□□□□ -0.98
MSH4-201ENST00000263187 RAB2BQ8WUD1 216 aa8.91□□□□□ -0.98
MSH4-201ENST00000263187 MAL2Q969L2 176 aa8.91□□□□□ -0.98
MSH4-201ENST00000263187 APIPQ96GX9 242 aa8.91□□□□□ -0.98
MSH4-201ENST00000263187 PPP3R2Q96LZ3 170 aa8.91□□□□□ -0.98
MSH4-201ENST00000263187 VPS51Q9UID3 782 aa8.91□□□□□ -0.98
MSH4-201ENST00000263187 CCL27Q9Y4X3 112 aa8.91□□□□□ -0.98
MSH4-201ENST00000263187 TET1Q8NFU7 2136 aa8.91□□□□□ -0.98
MSH4-201ENST00000263187 IFRD1O00458 451 aaPredicted RBP8.91□□□□□ -0.98
MSH4-201ENST00000263187 MANBAO00462 879 aa8.91□□□□□ -0.98
MSH4-201ENST00000263187 ZNF7P17097 686 aaPredicted RBP8.91□□□□□ -0.98
MSH4-201ENST00000263187 JAK1P23458 1154 aa8.91□□□□□ -0.98
MSH4-201ENST00000263187 TTKP33981 857 aa8.91□□□□□ -0.98
MSH4-201ENST00000263187 HNF1BP35680 557 aa8.91□□□□□ -0.98
MSH4-201ENST00000263187 STK19P49842 368 aaPredicted RBP8.91□□□□□ -0.98
MSH4-201ENST00000263187 ISL1P61371 349 aa8.91□□□□□ -0.98
MSH4-201ENST00000263187 CYP4F2P78329 520 aa8.91□□□□□ -0.98
MSH4-201ENST00000263187 CDK5R2Q13319 367 aa8.91□□□□□ -0.98
MSH4-201ENST00000263187 ADPRMQ3LIE5 342 aa8.91□□□□□ -0.98
MSH4-201ENST00000263187 ADNP2Q6IQ32 1131 aa8.91□□□□□ -0.98
MSH4-201ENST00000263187 DSG4Q86SJ6 1040 aa8.91□□□□□ -0.98
MSH4-201ENST00000263187 BEND7Q8N7W2 519 aaPredicted RBP8.91□□□□□ -0.98
MSH4-201ENST00000263187 ATG16L2Q8NAA4 619 aa8.91□□□□□ -0.98
MSH4-201ENST00000263187 ZNF540Q8NDQ6 660 aa8.91□□□□□ -0.98
MSH4-201ENST00000263187 OR52J3Q8NH60 311 aa8.91□□□□□ -0.98
MSH4-201ENST00000263187 TSPEARQ8WU66 669 aa8.91□□□□□ -0.98
MSH4-201ENST00000263187 SOCS4Q8WXH5 440 aa8.91□□□□□ -0.98
MSH4-201ENST00000263187 MTERF1Q99551 399 aaKnown RBP8.91□□□□□ -0.98
MSH4-201ENST00000263187 RBM4BQ9BQ04 359 aaKnown RBP8.91□□□□□ -0.98
MSH4-201ENST00000263187 RBM4Q9BWF3 364 aaKnown RBP8.91□□□□□ -0.98
MSH4-201ENST00000263187 CD244Q9BZW8 370 aa8.91□□□□□ -0.98
MSH4-201ENST00000263187 P2RY12Q9H244 342 aa8.91□□□□□ -0.98
MSH4-201ENST00000263187 MUC13Q9H3R2 512 aa8.91□□□□□ -0.98
MSH4-201ENST00000263187 ELOVL6Q9H5J4 265 aa8.91□□□□□ -0.98
MSH4-201ENST00000263187 MTRRQ9UBK8 725 aa8.91□□□□□ -0.98
MSH4-201ENST00000263187 LRFN2Q9ULH4 789 aa8.91□□□□□ -0.98
MSH4-201ENST00000263187 PCDHB7Q9Y5E2 793 aa8.91□□□□□ -0.98
MSH4-201ENST00000263187 ORC6Q9Y5N6 252 aa8.91□□□□□ -0.98
MSH4-201ENST00000263187 SCN10AQ9Y5Y9 1956 aa8.9□□□□□ -0.98
MSH4-201ENST00000263187 C16orf96A6NNT2 1141 aa8.9□□□□□ -0.98
MSH4-201ENST00000263187 NUDT7P0C024 238 aa8.9□□□□□ -0.98
MSH4-201ENST00000263187 GJA1P17302 382 aa8.9□□□□□ -0.98
MSH4-201ENST00000263187 RGS4P49798 205 aa8.9□□□□□ -0.98
MSH4-201ENST00000263187 SEPHS1P49903 392 aa8.9□□□□□ -0.98
MSH4-201ENST00000263187 TMBIM6P55061 237 aa8.9□□□□□ -0.98
MSH4-201ENST00000263187 IFITM3Q01628 133 aa8.9□□□□□ -0.98
MSH4-201ENST00000263187 NFATC2Q13469 925 aa8.9□□□□□ -0.98
MSH4-201ENST00000263187 TXNDC8Q6A555 127 aa8.9□□□□□ -0.98
MSH4-201ENST00000263187 FAM180BQ6P0A1 224 aa8.9□□□□□ -0.98
MSH4-201ENST00000263187 NCEH1Q6PIU2 408 aa8.9□□□□□ -0.98
MSH4-201ENST00000263187 AHSA2Q719I0 299 aa8.9□□□□□ -0.98
MSH4-201ENST00000263187 CLECL1Q8IZS7 167 aa8.9□□□□□ -0.98
MSH4-201ENST00000263187 ZBTB2Q8N680 514 aa8.9□□□□□ -0.98
MSH4-201ENST00000263187 LZICQ8WZA0 190 aa8.9□□□□□ -0.98
MSH4-201ENST00000263187 PEX13Q92968 403 aa8.9□□□□□ -0.98
MSH4-201ENST00000263187 MYO19Q96H55 970 aa8.9□□□□□ -0.98
MSH4-201ENST00000263187 SH3YL1Q96HL8 342 aaPredicted RBP8.9□□□□□ -0.98
MSH4-201ENST00000263187 KAT8Q9H7Z6 458 aaKnown RBP8.9□□□□□ -0.98
MSH4-201ENST00000263187 PDP1Q9P0J1 537 aaPredicted RBP8.9□□□□□ -0.98
MSH4-201ENST00000263187 TMEFF2Q9UIK5 374 aaPredicted RBP8.9□□□□□ -0.98
MSH4-201ENST00000263187 PPT2Q9UMR5 302 aa8.9□□□□□ -0.98
MSH4-201ENST00000263187 SLC22A14Q9Y267 594 aa8.9□□□□□ -0.98
MSH4-201ENST00000263187 VPS9D1Q9Y2B5 631 aa8.9□□□□□ -0.98
MSH4-201ENST00000263187 TNPO3Q9Y5L0 923 aaKnown RBP8.9□□□□□ -0.98
MSH4-201ENST00000263187 A0A1B0GVM2 712 aa8.9□□□□□ -0.98
MSH4-201ENST00000263187 ZNF701M0R085 212 aaPredicted RBP8.9□□□□□ -0.98
MSH4-201ENST00000263187 RFXANKO14593 260 aa8.9□□□□□ -0.98
MSH4-201ENST00000263187 CBFA2T3O75081 653 aa8.9□□□□□ -0.98
MSH4-201ENST00000263187 STK16O75716 305 aa8.9□□□□□ -0.98
MSH4-201ENST00000263187 VIPP01282 170 aa8.9□□□□□ -0.98
MSH4-201ENST00000263187 GBAP04062 536 aa8.9□□□□□ -0.98
MSH4-201ENST00000263187 LCKP06239 509 aa8.9□□□□□ -0.98
MSH4-201ENST00000263187 BPIP17213 487 aa8.9□□□□□ -0.98
MSH4-201ENST00000263187 GSTM2P28161 218 aa8.9□□□□□ -0.98
MSH4-201ENST00000263187 HALP42357 657 aa8.9□□□□□ -0.98
MSH4-201ENST00000263187 MAGEA11P43364 429 aa8.9□□□□□ -0.98
MSH4-201ENST00000263187 RPIAP49247 311 aa8.9□□□□□ -0.98
MSH4-201ENST00000263187 RING1Q06587 406 aa8.9□□□□□ -0.98
MSH4-201ENST00000263187 GRIK2Q13002 908 aa8.9□□□□□ -0.98
MSH4-201ENST00000263187 PCBP2Q15366 365 aaKnown RBP eCLIP8.9□□□□□ -0.98
MSH4-201ENST00000263187 ZXDCQ2QGD7 858 aaPredicted RBP8.9□□□□□ -0.98
MSH4-201ENST00000263187 SOWAHCQ53LP3 525 aaPredicted RBP8.9□□□□□ -0.98
MSH4-201ENST00000263187 ADGRF1Q5T601 910 aa8.9□□□□□ -0.98
MSH4-201ENST00000263187 IRAK1BP1Q5VVH5 260 aa8.9□□□□□ -0.98
MSH4-201ENST00000263187 PDE12Q6L8Q7 609 aaKnown RBP8.9□□□□□ -0.98
MSH4-201ENST00000263187 B3GNT8Q7Z7M8 397 aa8.9□□□□□ -0.98
MSH4-201ENST00000263187 ADCK1Q86TW2 530 aa8.9□□□□□ -0.98
MSH4-201ENST00000263187 ZSWIM9Q86XI8 627 aa8.9□□□□□ -0.98
MSH4-201ENST00000263187 VRK3Q8IV63 474 aa8.9□□□□□ -0.98
MSH4-201ENST00000263187 ADHFE1Q8IWW8 467 aa8.9□□□□□ -0.98
MSH4-201ENST00000263187 ARL14EPQ8N8R7 260 aaPredicted RBP8.9□□□□□ -0.98
MSH4-201ENST00000263187 GOLM1Q8NBJ4 401 aa8.9□□□□□ -0.98
MSH4-201ENST00000263187 RORBQ92753 470 aa8.9□□□□□ -0.98
MSH4-201ENST00000263187 FKBP10Q96AY3 582 aa8.9□□□□□ -0.98
MSH4-201ENST00000263187 NEURL2Q9BR09 285 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms