RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 GBP5Q96PP8 586 aa11.79□□□□□ -0.52
TRAF4-202ENST00000262396 RAB11FIP5Q9BXF6 653 aa11.79□□□□□ -0.52
TRAF4-202ENST00000262396 MLXIPLQ9NP71 852 aa11.79□□□□□ -0.52
TRAF4-202ENST00000262396 P4HTMQ9NXG6 502 aa11.79□□□□□ -0.52
TRAF4-202ENST00000262396 EURLQ9NYK6 297 aa11.79□□□□□ -0.52
TRAF4-202ENST00000262396 PLEKHB1Q9UF11 243 aaPredicted RBP11.79□□□□□ -0.52
TRAF4-202ENST00000262396 SLC2A6Q9UGQ3 507 aa11.79□□□□□ -0.52
TRAF4-202ENST00000262396 GUCA1BQ9UMX6 200 aa11.79□□□□□ -0.52
TRAF4-202ENST00000262396 B3GNT3Q9Y2A9 372 aa11.79□□□□□ -0.52
TRAF4-202ENST00000262396 KLHL20Q9Y2M5 609 aa11.79□□□□□ -0.52
TRAF4-202ENST00000262396 TCAF1Q9Y4C2 921 aa11.79□□□□□ -0.52
TRAF4-202ENST00000262396 FAM169AQ9Y6X4 670 aa11.79□□□□□ -0.52
TRAF4-202ENST00000262396 A0A1B0GX78 115 aa11.78□□□□□ -0.52
TRAF4-202ENST00000262396 TCRBV7S2A1N4TA0A589 114 aa11.78□□□□□ -0.52
TRAF4-202ENST00000262396 A1L4Q6 167 aa11.78□□□□□ -0.52
TRAF4-202ENST00000262396 BHMG1C9JSJ3 638 aaPredicted RBP11.78□□□□□ -0.52
TRAF4-202ENST00000262396 PRMT5O14744 637 aaPredicted RBP11.78□□□□□ -0.52
TRAF4-202ENST00000262396 KPNA5O15131 536 aa11.78□□□□□ -0.52
TRAF4-202ENST00000262396 LIASO43766 372 aa11.78□□□□□ -0.52
TRAF4-202ENST00000262396 SORBS2O94875 1100 aaKnown RBP11.78□□□□□ -0.52
TRAF4-202ENST00000262396 EIF2S1P05198 315 aaKnown RBP11.78□□□□□ -0.52
TRAF4-202ENST00000262396 CD9P21926 228 aa11.78□□□□□ -0.52
TRAF4-202ENST00000262396 PKLRP30613 574 aa11.78□□□□□ -0.52
TRAF4-202ENST00000262396 CCR7P32248 378 aa11.78□□□□□ -0.52
TRAF4-202ENST00000262396 BASP1P80723 227 aaKnown RBP11.78□□□□□ -0.52
TRAF4-202ENST00000262396 KLF1Q13351 362 aaPredicted RBP11.78□□□□□ -0.52
TRAF4-202ENST00000262396 MRPL49Q13405 166 aaKnown RBP11.78□□□□□ -0.52
TRAF4-202ENST00000262396 GRM7Q14831 915 aa11.78□□□□□ -0.52
TRAF4-202ENST00000262396 MYBPC3Q14896 1274 aa11.78□□□□□ -0.52
TRAF4-202ENST00000262396 RPS6KA1Q15418 735 aa11.78□□□□□ -0.52
TRAF4-202ENST00000262396 ZIC1Q15915 447 aa11.78□□□□□ -0.52
TRAF4-202ENST00000262396 RBBP7Q16576 425 aa11.78□□□□□ -0.52
TRAF4-202ENST00000262396 FAM214AQ32MH5 1076 aa11.78□□□□□ -0.52
TRAF4-202ENST00000262396 PRR30Q53SZ7 412 aaPredicted RBP11.78□□□□□ -0.52
TRAF4-202ENST00000262396 TCTE1Q5JU00 501 aa11.78□□□□□ -0.52
TRAF4-202ENST00000262396 PCID2Q5JVF3 399 aa11.78□□□□□ -0.52
TRAF4-202ENST00000262396 UNC5DQ6UXZ4 953 aa11.78□□□□□ -0.52
TRAF4-202ENST00000262396 FAM20CQ8IXL6 584 aa11.78□□□□□ -0.52
TRAF4-202ENST00000262396 KLHDC8BQ8IXV7 354 aa11.78□□□□□ -0.52
TRAF4-202ENST00000262396 SLC22A15Q8IZD6 547 aa11.78□□□□□ -0.52
TRAF4-202ENST00000262396 KRT222Q8N1A0 295 aa11.78□□□□□ -0.52
TRAF4-202ENST00000262396 DNAJC22Q8N4W6 341 aa11.78□□□□□ -0.52
TRAF4-202ENST00000262396 CISD2Q8N5K1 135 aaKnown RBP11.78□□□□□ -0.52
TRAF4-202ENST00000262396 RNF10Q8N5U6 811 aaKnown RBP11.78□□□□□ -0.52
TRAF4-202ENST00000262396 RBMXL3Q8N7X1 1067 aaKnown RBP11.78□□□□□ -0.52
TRAF4-202ENST00000262396 OR13J1Q8NGT2 312 aa11.78□□□□□ -0.52
TRAF4-202ENST00000262396 IL17FQ96PD4 163 aa11.78□□□□□ -0.52
TRAF4-202ENST00000262396 PSMG3-AS1Q96PY0 264 aa11.78□□□□□ -0.52
TRAF4-202ENST00000262396 RANBP9Q96S59 729 aa11.78□□□□□ -0.52
TRAF4-202ENST00000262396 SMAD5Q99717 465 aaKnown RBP11.78□□□□□ -0.52
TRAF4-202ENST00000262396 SELENOSQ9BQE4 189 aa11.78□□□□□ -0.52
TRAF4-202ENST00000262396 YIPF2Q9BWQ6 316 aa11.78□□□□□ -0.52
TRAF4-202ENST00000262396 CARD6Q9BX69 1037 aa11.78□□□□□ -0.52
TRAF4-202ENST00000262396 CHRNA10Q9GZZ6 450 aa11.78□□□□□ -0.52
TRAF4-202ENST00000262396 RBSNQ9H1K0 784 aa11.78□□□□□ -0.52
TRAF4-202ENST00000262396 AGPAT4Q9NRZ5 378 aa11.78□□□□□ -0.52
TRAF4-202ENST00000262396 BFARQ9NZS9 450 aa11.78□□□□□ -0.52
TRAF4-202ENST00000262396 TSR3Q9UJK0 312 aaKnown RBP11.78□□□□□ -0.52
TRAF4-202ENST00000262396 TTC7AQ9ULT0 858 aaPredicted RBP11.78□□□□□ -0.52
TRAF4-202ENST00000262396 COPG1Q9Y678 874 aaKnown RBP11.78□□□□□ -0.52
TRAF4-202ENST00000262396 MAST4O15021 2626 aa11.77□□□□□ -0.52
TRAF4-202ENST00000262396 IQCF5A8MTL0 148 aa11.77□□□□□ -0.53
TRAF4-202ENST00000262396 TCP11X1B4DZS4 312 aa11.77□□□□□ -0.53
TRAF4-202ENST00000262396 CD3EAPO15446 510 aaKnown RBP11.77□□□□□ -0.53
TRAF4-202ENST00000262396 KLF7O75840 302 aaPredicted RBP11.77□□□□□ -0.53
TRAF4-202ENST00000262396 DDAH2O95865 285 aa11.77□□□□□ -0.53
TRAF4-202ENST00000262396 GRIA3P42263 894 aa11.77□□□□□ -0.53
TRAF4-202ENST00000262396 EIF3BP55884 814 aaKnown RBP11.77□□□□□ -0.53
TRAF4-202ENST00000262396 OCA2Q04671 838 aa11.77□□□□□ -0.53
TRAF4-202ENST00000262396 AIMP2Q13155 320 aaKnown RBP11.77□□□□□ -0.53
TRAF4-202ENST00000262396 NR6A1Q15406 480 aa11.77□□□□□ -0.53
TRAF4-202ENST00000262396 ZNF658BQ4V348 819 aaPredicted RBP11.77□□□□□ -0.53
TRAF4-202ENST00000262396 FIGLAQ6QHK4 219 aa11.77□□□□□ -0.53
TRAF4-202ENST00000262396 LDB1Q86U70 411 aaPredicted RBP11.77□□□□□ -0.53
TRAF4-202ENST00000262396 SLC13A5Q86YT5 568 aaPredicted RBP11.77□□□□□ -0.53
TRAF4-202ENST00000262396 MAIP1Q8WWC4 291 aa11.77□□□□□ -0.53
TRAF4-202ENST00000262396 RAD51AP1Q96B01 352 aa11.77□□□□□ -0.53
TRAF4-202ENST00000262396 HES6Q96HZ4 224 aa11.77□□□□□ -0.53
TRAF4-202ENST00000262396 CNDP1Q96KN2 507 aa11.77□□□□□ -0.53
TRAF4-202ENST00000262396 EPS8L2Q9H6S3 715 aa11.77□□□□□ -0.53
TRAF4-202ENST00000262396 CUTCQ9NTM9 273 aa11.77□□□□□ -0.53
TRAF4-202ENST00000262396 CUEDC1Q9NWM3 386 aaPredicted RBP11.77□□□□□ -0.53
TRAF4-202ENST00000262396 RIMKLBQ9ULI2 386 aa11.77□□□□□ -0.53
TRAF4-202ENST00000262396 PTPN13Q12923 2485 aa11.77□□□□□ -0.53
TRAF4-202ENST00000262396 CLEC18AA5D8T8 446 aa11.76□□□□□ -0.53
TRAF4-202ENST00000262396 E5RI56 91 aa11.76□□□□□ -0.53
TRAF4-202ENST00000262396 AGPSO00116 658 aa11.76□□□□□ -0.53
TRAF4-202ENST00000262396 RASGRF2O14827 1237 aa11.76□□□□□ -0.53
TRAF4-202ENST00000262396 SUN1O94901 812 aa11.76□□□□□ -0.53
TRAF4-202ENST00000262396 ETS1P14921 441 aa11.76□□□□□ -0.53
TRAF4-202ENST00000262396 CCNFP41002 786 aa11.76□□□□□ -0.53
TRAF4-202ENST00000262396 GRIA1P42261 906 aa11.76□□□□□ -0.53
TRAF4-202ENST00000262396 TERF1P54274 439 aa11.76□□□□□ -0.53
TRAF4-202ENST00000262396 VSX2P58304 361 aaPredicted RBP11.76□□□□□ -0.53
TRAF4-202ENST00000262396 SARNPP82979 210 aaKnown RBP11.76□□□□□ -0.53
TRAF4-202ENST00000262396 NAA25Q14CX7 972 aa11.76□□□□□ -0.53
TRAF4-202ENST00000262396 PLEKHN1Q494U1 663 aaPredicted RBP11.76□□□□□ -0.53
TRAF4-202ENST00000262396 AGAP7PQ5VUJ5 663 aa11.76□□□□□ -0.53
TRAF4-202ENST00000262396 YOD1Q5VVQ6 348 aaPredicted RBP11.76□□□□□ -0.53
TRAF4-202ENST00000262396 ZNF385CQ66K41 422 aaPredicted RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms