RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 SLC35E2BP0CK96 405 aa12.98□□□□□ -0.33
SGCA-201ENST00000262018 BGNP21810 368 aa12.98□□□□□ -0.33
SGCA-201ENST00000262018 CD1CP29017 333 aa12.98□□□□□ -0.33
SGCA-201ENST00000262018 HMGCLP35914 325 aa12.98□□□□□ -0.33
SGCA-201ENST00000262018 MMP12P39900 470 aa12.98□□□□□ -0.33
SGCA-201ENST00000262018 TSPAN7P41732 249 aa12.98□□□□□ -0.33
SGCA-201ENST00000262018 STC1P52823 247 aa12.98□□□□□ -0.33
SGCA-201ENST00000262018 RAB15P59190 212 aa12.98□□□□□ -0.33
SGCA-201ENST00000262018 IRF9Q00978 393 aa12.98□□□□□ -0.33
SGCA-201ENST00000262018 ABHD18Q0P651 414 aa12.98□□□□□ -0.33
SGCA-201ENST00000262018 INPP5AQ14642 412 aa12.98□□□□□ -0.33
SGCA-201ENST00000262018 PTPRRQ15256 657 aa12.98□□□□□ -0.33
SGCA-201ENST00000262018 WSCD2Q2TBF2 565 aa12.98□□□□□ -0.33
SGCA-201ENST00000262018 CRTC2Q53ET0 693 aaPredicted RBP12.98□□□□□ -0.33
SGCA-201ENST00000262018 RBM20Q5T481 1227 aaKnown RBP12.98□□□□□ -0.33
SGCA-201ENST00000262018 NKAIN2Q5VXU1 208 aa12.98□□□□□ -0.33
SGCA-201ENST00000262018 CGB2Q6NT52 195 aa12.98□□□□□ -0.33
SGCA-201ENST00000262018 RAPH1Q70E73 1250 aa12.98□□□□□ -0.33
SGCA-201ENST00000262018 USP45Q70EL2 814 aa12.98□□□□□ -0.33
SGCA-201ENST00000262018 LYSMD3Q7Z3D4 306 aa12.98□□□□□ -0.33
SGCA-201ENST00000262018 CCDC91Q7Z6B0 441 aa12.98□□□□□ -0.33
SGCA-201ENST00000262018 LDB1Q86U70 411 aaPredicted RBP12.98□□□□□ -0.33
SGCA-201ENST00000262018 NUDCD3Q8IVD9 361 aa12.98□□□□□ -0.33
SGCA-201ENST00000262018 CEP97Q8IW35 865 aa12.98□□□□□ -0.33
SGCA-201ENST00000262018 OR1E3Q8WZA6 343 aa12.98□□□□□ -0.33
SGCA-201ENST00000262018 EID2BQ96D98 161 aa12.98□□□□□ -0.33
SGCA-201ENST00000262018 SCRN2Q96FV2 425 aa12.98□□□□□ -0.33
SGCA-201ENST00000262018 TSPAN17Q96FV3 270 aa12.98□□□□□ -0.33
SGCA-201ENST00000262018 TCTN2Q96GX1 697 aa12.98□□□□□ -0.33
SGCA-201ENST00000262018 CTRCQ99895 268 aa12.98□□□□□ -0.33
SGCA-201ENST00000262018 ELAC2Q9BQ52 826 aaKnown RBP12.98□□□□□ -0.33
SGCA-201ENST00000262018 GPR63Q9BZJ6 419 aa12.98□□□□□ -0.33
SGCA-201ENST00000262018 SPRY4Q9C004 299 aa12.98□□□□□ -0.33
SGCA-201ENST00000262018 ERRFI1Q9UJM3 462 aaPredicted RBP12.98□□□□□ -0.33
SGCA-201ENST00000262018 PKP3Q9Y446 797 aa12.98□□□□□ -0.33
SGCA-201ENST00000262018 DGKBQ9Y6T7 804 aa12.98□□□□□ -0.33
SGCA-201ENST00000262018 LRP4O75096 1905 aa12.98□□□□□ -0.33
SGCA-201ENST00000262018 SHANK1Q9Y566 2161 aa12.98□□□□□ -0.33
SGCA-201ENST00000262018 A0A087X1B8 175 aa12.97□□□□□ -0.33
SGCA-201ENST00000262018 PHGDHO43175 533 aaKnown RBP12.97□□□□□ -0.33
SGCA-201ENST00000262018 APOA4P06727 396 aa12.97□□□□□ -0.33
SGCA-201ENST00000262018 MC4RP32245 332 aa12.97□□□□□ -0.33
SGCA-201ENST00000262018 GMPRP36959 345 aa12.97□□□□□ -0.33
SGCA-201ENST00000262018 SLC12A2P55011 1212 aa12.97□□□□□ -0.33
SGCA-201ENST00000262018 XIAPP98170 497 aa12.97□□□□□ -0.33
SGCA-201ENST00000262018 BIRC2Q13490 618 aa12.97□□□□□ -0.33
SGCA-201ENST00000262018 PEX6Q13608 980 aa12.97□□□□□ -0.33
SGCA-201ENST00000262018 TMEM52BQ4KMG9 183 aa12.97□□□□□ -0.33
SGCA-201ENST00000262018 HECTD2Q5U5R9 776 aa12.97□□□□□ -0.33
SGCA-201ENST00000262018 FAM45BPQ6NSW5 357 aa12.97□□□□□ -0.33
SGCA-201ENST00000262018 FAM47EQ6ZV65 393 aa12.97□□□□□ -0.33
SGCA-201ENST00000262018 DPPA4Q7L190 304 aa12.97□□□□□ -0.33
SGCA-201ENST00000262018 CCDC197Q8NCU1 140 aa12.97□□□□□ -0.33
SGCA-201ENST00000262018 OR4D9Q8NGE8 314 aa12.97□□□□□ -0.33
SGCA-201ENST00000262018 CCL4L1Q8NHW4 92 aa12.97□□□□□ -0.33
SGCA-201ENST00000262018 FAM45AQ8TCE6 357 aa12.97□□□□□ -0.33
SGCA-201ENST00000262018 TEFMQ96QE5 360 aaKnown RBP12.97□□□□□ -0.33
SGCA-201ENST00000262018 MCCC1Q96RQ3 725 aaPredicted RBP12.97□□□□□ -0.33
SGCA-201ENST00000262018 OLFM1Q99784 485 aa12.97□□□□□ -0.33
SGCA-201ENST00000262018 TMEM168Q9H0V1 697 aa12.97□□□□□ -0.33
SGCA-201ENST00000262018 ACTR5Q9H9F9 607 aaPredicted RBP12.97□□□□□ -0.33
SGCA-201ENST00000262018 ZFYVE1Q9HBF4 777 aa12.97□□□□□ -0.33
SGCA-201ENST00000262018 CYP4F12Q9HCS2 524 aa12.97□□□□□ -0.33
SGCA-201ENST00000262018 BPIFA1Q9NP55 256 aa12.97□□□□□ -0.33
SGCA-201ENST00000262018 SLCO1B3Q9NPD5 702 aa12.97□□□□□ -0.33
SGCA-201ENST00000262018 MRPL40Q9NQ50 206 aaKnown RBP12.97□□□□□ -0.33
SGCA-201ENST00000262018 ZNF358Q9NW07 568 aa12.97□□□□□ -0.33
SGCA-201ENST00000262018 POLHQ9Y253 713 aa12.97□□□□□ -0.33
SGCA-201ENST00000262018 ACOT9Q9Y305 439 aa12.97□□□□□ -0.33
SGCA-201ENST00000262018 VWA7Q9Y334 891 aa12.97□□□□□ -0.33
SGCA-201ENST00000262018 RRP15Q9Y3B9 282 aaKnown RBP12.97□□□□□ -0.33
SGCA-201ENST00000262018 PCDHB3Q9Y5E6 796 aa12.97□□□□□ -0.33
SGCA-201ENST00000262018 WISP3O95389 354 aaPredicted RBP12.96□□□□□ -0.33
SGCA-201ENST00000262018 SLC4A1P02730 911 aa12.96□□□□□ -0.33
SGCA-201ENST00000262018 PCCBP05166 539 aa12.96□□□□□ -0.33
SGCA-201ENST00000262018 THRAP10827 490 aa12.96□□□□□ -0.33
SGCA-201ENST00000262018 CYP2A6P11509 494 aaPredicted RBP12.96□□□□□ -0.33
SGCA-201ENST00000262018 NEFHP12036 1026 aa12.96□□□□□ -0.33
SGCA-201ENST00000262018 SAT1P21673 171 aa12.96□□□□□ -0.33
SGCA-201ENST00000262018 ALDH3A1P30838 453 aa12.96□□□□□ -0.33
SGCA-201ENST00000262018 CORO7P57737 925 aa12.96□□□□□ -0.33
SGCA-201ENST00000262018 ERV3-1Q14264 604 aa12.96□□□□□ -0.33
SGCA-201ENST00000262018 PCLAFQ15004 111 aa12.96□□□□□ -0.33
SGCA-201ENST00000262018 TSNAXIP1Q2TAA8 658 aa12.96□□□□□ -0.33
SGCA-201ENST00000262018 KRTAP21-3Q3LHN1 58 aa12.96□□□□□ -0.33
SGCA-201ENST00000262018 NADK2Q4G0N4 442 aa12.96□□□□□ -0.33
SGCA-201ENST00000262018 ATG16L1Q676U5 607 aa12.96□□□□□ -0.33
SGCA-201ENST00000262018 ZNF438Q7Z4V0 828 aa12.96□□□□□ -0.33
SGCA-201ENST00000262018 SPATA21Q7Z572 469 aa12.96□□□□□ -0.33
SGCA-201ENST00000262018 CENPLQ8N0S6 344 aaPredicted RBP12.96□□□□□ -0.33
SGCA-201ENST00000262018 CBARPQ8N350 705 aaPredicted RBP12.96□□□□□ -0.33
SGCA-201ENST00000262018 CCDC63Q8NA47 563 aa12.96□□□□□ -0.33
SGCA-201ENST00000262018 TSNARE1Q96NA8 513 aa12.96□□□□□ -0.33
SGCA-201ENST00000262018 NDNQ99608 321 aa12.96□□□□□ -0.33
SGCA-201ENST00000262018 MECRQ9BV79 373 aa12.96□□□□□ -0.33
SGCA-201ENST00000262018 NMRAL1Q9HBL8 299 aa12.96□□□□□ -0.33
SGCA-201ENST00000262018 FGF22Q9HCT0 170 aa12.96□□□□□ -0.33
SGCA-201ENST00000262018 TMEM9Q9P0T7 183 aa12.96□□□□□ -0.33
SGCA-201ENST00000262018 COPG2Q9UBF2 871 aa12.96□□□□□ -0.33
SGCA-201ENST00000262018 B4GALT6Q9UBX8 382 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms