RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 TNFRSF11BO00300 401 aa9.88□□□□□ -0.83
PALB2-201ENST00000261584 IL6P05231 212 aa9.88□□□□□ -0.83
PALB2-201ENST00000261584 FABP3P05413 133 aa9.88□□□□□ -0.83
PALB2-201ENST00000261584 SLC10A3P09131 477 aa9.88□□□□□ -0.83
PALB2-201ENST00000261584 TSPAN19P0C672 248 aa9.88□□□□□ -0.83
PALB2-201ENST00000261584 ELNP15502 786 aa9.88□□□□□ -0.83
PALB2-201ENST00000261584 RRM2P31350 389 aa9.88□□□□□ -0.83
PALB2-201ENST00000261584 ALDH3B2P48448 385 aa9.88□□□□□ -0.83
PALB2-201ENST00000261584 CD97P48960 835 aa9.88□□□□□ -0.83
PALB2-201ENST00000261584 MLLT10P55197 1068 aa9.88□□□□□ -0.83
PALB2-201ENST00000261584 EMX1Q04741 257 aaPredicted RBP9.88□□□□□ -0.83
PALB2-201ENST00000261584 CHIT1Q13231 466 aa9.88□□□□□ -0.83
PALB2-201ENST00000261584 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.88□□□□□ -0.83
PALB2-201ENST00000261584 MSANTD2Q6P1R3 559 aa9.88□□□□□ -0.83
PALB2-201ENST00000261584 ELMSAN1Q6PJG2 1045 aa9.88□□□□□ -0.83
PALB2-201ENST00000261584 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.88□□□□□ -0.83
PALB2-201ENST00000261584 AGMOQ6ZNB7 445 aa9.88□□□□□ -0.83
PALB2-201ENST00000261584 Q6ZNX1 250 aa9.88□□□□□ -0.83
PALB2-201ENST00000261584 TRMT11Q7Z4G4 463 aaKnown RBP9.88□□□□□ -0.83
PALB2-201ENST00000261584 ADAMTSL2Q86TH1 951 aa9.88□□□□□ -0.83
PALB2-201ENST00000261584 PIH1D2Q8WWB5 315 aa9.88□□□□□ -0.83
PALB2-201ENST00000261584 ATL1Q8WXF7 558 aa9.88□□□□□ -0.83
PALB2-201ENST00000261584 AUTS2Q8WXX7 1259 aa9.88□□□□□ -0.83
PALB2-201ENST00000261584 PARK7Q99497 189 aaKnown RBP9.88□□□□□ -0.83
PALB2-201ENST00000261584 COMMD3Q9UBI1 195 aa9.88□□□□□ -0.83
PALB2-201ENST00000261584 NRAPQ86VF7 1730 aa9.88□□□□□ -0.83
PALB2-201ENST00000261584 MYADML2A6NDP7 307 aa9.88□□□□□ -0.83
PALB2-201ENST00000261584 TBKBP1A7MCY6 615 aa9.88□□□□□ -0.83
PALB2-201ENST00000261584 SDHBP21912 280 aa9.88□□□□□ -0.83
PALB2-201ENST00000261584 OR2B6P58173 313 aa9.88□□□□□ -0.83
PALB2-201ENST00000261584 NFKB2Q00653 900 aa9.88□□□□□ -0.83
PALB2-201ENST00000261584 KRT33BQ14525 404 aa9.88□□□□□ -0.83
PALB2-201ENST00000261584 PON2Q15165 354 aa9.88□□□□□ -0.83
PALB2-201ENST00000261584 TSTQ16762 297 aaKnown RBP9.88□□□□□ -0.83
PALB2-201ENST00000261584 PHKG1Q16816 387 aa9.88□□□□□ -0.83
PALB2-201ENST00000261584 TNFAIP8L2Q6P589 184 aaPredicted RBP9.88□□□□□ -0.83
PALB2-201ENST00000261584 CCBE1Q6UXH8 406 aaPredicted RBP9.88□□□□□ -0.83
PALB2-201ENST00000261584 ARMC8Q8IUR7 673 aa9.88□□□□□ -0.83
PALB2-201ENST00000261584 CADM3Q8N126 398 aa9.88□□□□□ -0.83
PALB2-201ENST00000261584 GPC2Q8N158 579 aa9.88□□□□□ -0.83
PALB2-201ENST00000261584 ZFP41Q8N8Y5 198 aa9.88□□□□□ -0.83
PALB2-201ENST00000261584 PROKR1Q8TCW9 393 aa9.88□□□□□ -0.83
PALB2-201ENST00000261584 BTN2A3PQ96KV6 586 aa9.88□□□□□ -0.83
PALB2-201ENST00000261584 CEP295NLQ96MC4 621 aa9.88□□□□□ -0.83
PALB2-201ENST00000261584 BIRC8Q96P09 236 aa9.88□□□□□ -0.83
PALB2-201ENST00000261584 SDR39U1Q9NRG7 319 aaPredicted RBP9.88□□□□□ -0.83
PALB2-201ENST00000261584 AIG1Q9NVV5 245 aa9.88□□□□□ -0.83
PALB2-201ENST00000261584 C1orf109Q9NX04 203 aa9.88□□□□□ -0.83
PALB2-201ENST00000261584 GTF2IRD1Q9UHL9 959 aa9.88□□□□□ -0.83
PALB2-201ENST00000261584 ZNF221Q9UK13 617 aa9.88□□□□□ -0.83
PALB2-201ENST00000261584 SNX6Q9UNH7 406 aa9.88□□□□□ -0.83
PALB2-201ENST00000261584 DOCK5Q9H7D0 1870 aa9.88□□□□□ -0.83
PALB2-201ENST00000261584 ARAP2Q8WZ64 1704 aa9.88□□□□□ -0.83
PALB2-201ENST00000261584 SMIM35A0A1B0GVV1 85 aa9.88□□□□□ -0.83
PALB2-201ENST00000261584 CLIC1O00299 241 aa9.88□□□□□ -0.83
PALB2-201ENST00000261584 SLC22A2O15244 555 aa9.88□□□□□ -0.83
PALB2-201ENST00000261584 INSIG1O15503 277 aa9.88□□□□□ -0.83
PALB2-201ENST00000261584 GPR32O75388 356 aa9.88□□□□□ -0.83
PALB2-201ENST00000261584 GADD45AP24522 165 aa9.88□□□□□ -0.83
PALB2-201ENST00000261584 MAGEA8P43361 318 aa9.88□□□□□ -0.83
PALB2-201ENST00000261584 DNAJB13P59910 316 aa9.88□□□□□ -0.83
PALB2-201ENST00000261584 RPS7P62081 194 aaKnown RBP9.88□□□□□ -0.83
PALB2-201ENST00000261584 ILF2Q12905 390 aaKnown RBP9.88□□□□□ -0.83
PALB2-201ENST00000261584 UGT3A2Q3SY77 523 aa9.88□□□□□ -0.83
PALB2-201ENST00000261584 KIAA1191Q96A73 305 aa9.88□□□□□ -0.83
PALB2-201ENST00000261584 OR51E2Q9H255 320 aa9.88□□□□□ -0.83
PALB2-201ENST00000261584 OSER1Q9NX31 292 aa9.88□□□□□ -0.83
PALB2-201ENST00000261584 GPRC5BQ9NZH0 403 aa9.88□□□□□ -0.83
PALB2-201ENST00000261584 IL37Q9NZH6 218 aa9.88□□□□□ -0.83
PALB2-201ENST00000261584 DNAJC27Q9NZQ0 273 aa9.88□□□□□ -0.83
PALB2-201ENST00000261584 A0A1B0GVC2 190 aa9.87□□□□□ -0.83
PALB2-201ENST00000261584 A6NIN4 97 aa9.87□□□□□ -0.83
PALB2-201ENST00000261584 H3BM21 787 aa9.87□□□□□ -0.83
PALB2-201ENST00000261584 GJB5O95377 273 aa9.87□□□□□ -0.83
PALB2-201ENST00000261584 EEFSECP57772 596 aaKnown RBP9.87□□□□□ -0.83
PALB2-201ENST00000261584 TUSC3Q13454 348 aa9.87□□□□□ -0.83
PALB2-201ENST00000261584 CLCA4Q14CN2 919 aa9.87□□□□□ -0.83
PALB2-201ENST00000261584 MINDY1Q8N5J2 469 aa9.87□□□□□ -0.83
PALB2-201ENST00000261584 C19orf18Q8NEA5 215 aa9.87□□□□□ -0.83
PALB2-201ENST00000261584 SLC22A17Q8WUG5 538 aa9.87□□□□□ -0.83
PALB2-201ENST00000261584 TMEM174Q8WUU8 243 aa9.87□□□□□ -0.83
PALB2-201ENST00000261584 FOXJ1Q92949 421 aa9.87□□□□□ -0.83
PALB2-201ENST00000261584 IMP4Q96G21 291 aaKnown RBP9.87□□□□□ -0.83
PALB2-201ENST00000261584 DIRAS2Q96HU8 199 aa9.87□□□□□ -0.83
PALB2-201ENST00000261584 HSH2DQ96JZ2 352 aa9.87□□□□□ -0.83
PALB2-201ENST00000261584 PPP1R2P1Q96PQ5 205 aa9.87□□□□□ -0.83
PALB2-201ENST00000261584 TRNT1Q96Q11 434 aaKnown RBP9.87□□□□□ -0.83
PALB2-201ENST00000261584 ZNF347Q96SE7 839 aa9.87□□□□□ -0.83
PALB2-201ENST00000261584 TTPALQ9BTX7 342 aa9.87□□□□□ -0.83
PALB2-201ENST00000261584 TFB2MQ9H5Q4 396 aaKnown RBP9.87□□□□□ -0.83
PALB2-201ENST00000261584 IKZF5Q9H5V7 419 aa9.87□□□□□ -0.83
PALB2-201ENST00000261584 ZFYVE1Q9HBF4 777 aa9.87□□□□□ -0.83
PALB2-201ENST00000261584 ZC4H2Q9NQZ6 224 aa9.87□□□□□ -0.83
PALB2-201ENST00000261584 INIPQ9NRY2 104 aa9.87□□□□□ -0.83
PALB2-201ENST00000261584 TMCC3Q9ULS5 477 aa9.87□□□□□ -0.83
PALB2-201ENST00000261584 SPATA2Q9UM82 520 aa9.87□□□□□ -0.83
PALB2-201ENST00000261584 PCDHB14Q9Y5E9 798 aa9.87□□□□□ -0.83
PALB2-201ENST00000261584 SLX4Q8IY92 1834 aa9.87□□□□□ -0.83
PALB2-201ENST00000261584 A0A0G2JLL6 359 aaPredicted RBP9.87□□□□□ -0.83
PALB2-201ENST00000261584 SEPT4O43236 478 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms