RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 SPSB1Q96BD6 273 aa4.09□□□□□ -1.75
CCDC54-201ENST00000261058 MOB3AQ96BX8 217 aa4.09□□□□□ -1.75
CCDC54-201ENST00000261058 FNBP1Q96RU3 617 aa4.09□□□□□ -1.75
CCDC54-201ENST00000261058 PAIP2Q9BPZ3 127 aaKnown RBP4.09□□□□□ -1.75
CCDC54-201ENST00000261058 ZWILCHQ9H900 591 aa4.09□□□□□ -1.75
CCDC54-201ENST00000261058 ZNF334Q9HCZ1 680 aaPredicted RBP4.09□□□□□ -1.75
CCDC54-201ENST00000261058 FAM118AQ9NWS6 357 aa4.09□□□□□ -1.75
CCDC54-201ENST00000261058 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.09□□□□□ -1.75
CCDC54-201ENST00000261058 SLC7A7Q9UM01 511 aa4.09□□□□□ -1.75
CCDC54-201ENST00000261058 A0A087WV48 116 aa4.08□□□□□ -1.76
CCDC54-201ENST00000261058 A0A1W2PPK0 400 aa4.08□□□□□ -1.76
CCDC54-201ENST00000261058 OR6C76A6NM76 312 aa4.08□□□□□ -1.76
CCDC54-201ENST00000261058 PI4K2BG5E9Z4 385 aa4.08□□□□□ -1.76
CCDC54-201ENST00000261058 HSPA4LO95757 839 aa4.08□□□□□ -1.76
CCDC54-201ENST00000261058 INHBAP08476 426 aa4.08□□□□□ -1.76
CCDC54-201ENST00000261058 HAPLN1P10915 354 aaPredicted RBP4.08□□□□□ -1.76
CCDC54-201ENST00000261058 SCG2P13521 617 aa4.08□□□□□ -1.76
CCDC54-201ENST00000261058 MUTP22033 750 aa4.08□□□□□ -1.76
CCDC54-201ENST00000261058 EEF1B2P24534 225 aaKnown RBP4.08□□□□□ -1.76
CCDC54-201ENST00000261058 PTGER4P35408 488 aa4.08□□□□□ -1.76
CCDC54-201ENST00000261058 CLDN15P56746 228 aa4.08□□□□□ -1.76
CCDC54-201ENST00000261058 TRIM29Q14134 588 aa4.08□□□□□ -1.76
CCDC54-201ENST00000261058 SPDYCQ5MJ68 293 aa4.08□□□□□ -1.76
CCDC54-201ENST00000261058 ABRAXAS1Q6UWZ7 409 aa4.08□□□□□ -1.76
CCDC54-201ENST00000261058 MEX3BQ6ZN04 569 aaKnown RBP4.08□□□□□ -1.76
CCDC54-201ENST00000261058 ZBTB49Q6ZSB9 765 aa4.08□□□□□ -1.76
CCDC54-201ENST00000261058 BHLHA9Q7RTU4 235 aa4.08□□□□□ -1.76
CCDC54-201ENST00000261058 NUP54Q7Z3B4 507 aa4.08□□□□□ -1.76
CCDC54-201ENST00000261058 VSIG1Q86XK7 387 aa4.08□□□□□ -1.76
CCDC54-201ENST00000261058 BMPERQ8N8U9 685 aa4.08□□□□□ -1.76
CCDC54-201ENST00000261058 OR1J1Q8NGS3 322 aa4.08□□□□□ -1.76
CCDC54-201ENST00000261058 EXT2Q93063 718 aa4.08□□□□□ -1.76
CCDC54-201ENST00000261058 LMLNQ96KR4 655 aa4.08□□□□□ -1.76
CCDC54-201ENST00000261058 EGFL8Q99944 293 aa4.08□□□□□ -1.76
CCDC54-201ENST00000261058 FAM129AQ9BZQ8 928 aa4.08□□□□□ -1.76
CCDC54-201ENST00000261058 LAT2Q9GZY6 243 aa4.08□□□□□ -1.76
CCDC54-201ENST00000261058 ABCG4Q9H172 646 aa4.08□□□□□ -1.76
CCDC54-201ENST00000261058 FZD8Q9H461 694 aa4.08□□□□□ -1.76
CCDC54-201ENST00000261058 SPHK1Q9NYA1 384 aa4.08□□□□□ -1.76
CCDC54-201ENST00000261058 ZDHHC2Q9UIJ5 367 aa4.08□□□□□ -1.76
CCDC54-201ENST00000261058 RNF150Q9ULK6 438 aa4.08□□□□□ -1.76
CCDC54-201ENST00000261058 JRKLQ9Y4A0 524 aa4.08□□□□□ -1.76
CCDC54-201ENST00000261058 FLT1P17948 1338 aa4.07□□□□□ -1.76
CCDC54-201ENST00000261058 SIX3O95343 332 aaPredicted RBP4.07□□□□□ -1.76
CCDC54-201ENST00000261058 PIGNO95427 931 aa4.07□□□□□ -1.76
CCDC54-201ENST00000261058 NR3C1P04150 777 aa4.07□□□□□ -1.76
CCDC54-201ENST00000261058 HSPA8P11142 646 aaKnown RBP4.07□□□□□ -1.76
CCDC54-201ENST00000261058 HOXB6P17509 224 aaKnown RBP4.07□□□□□ -1.76
CCDC54-201ENST00000261058 CA4P22748 312 aa4.07□□□□□ -1.76
CCDC54-201ENST00000261058 ANOS1P23352 680 aa4.07□□□□□ -1.76
CCDC54-201ENST00000261058 PTPN3P26045 913 aa4.07□□□□□ -1.76
CCDC54-201ENST00000261058 TNNT2P45379 298 aaPredicted RBP4.07□□□□□ -1.76
CCDC54-201ENST00000261058 MAPK12P53778 367 aa4.07□□□□□ -1.76
CCDC54-201ENST00000261058 DMPKQ09013 629 aa4.07□□□□□ -1.76
CCDC54-201ENST00000261058 SCARB2Q14108 478 aa4.07□□□□□ -1.76
CCDC54-201ENST00000261058 PKN2Q16513 984 aaKnown RBP4.07□□□□□ -1.76
CCDC54-201ENST00000261058 UGT3A2Q3SY77 523 aa4.07□□□□□ -1.76
CCDC54-201ENST00000261058 ELFN2Q5R3F8 820 aa4.07□□□□□ -1.76
CCDC54-201ENST00000261058 C6orf136Q5SQH8 315 aa4.07□□□□□ -1.76
CCDC54-201ENST00000261058 KRT39Q6A163 491 aa4.07□□□□□ -1.76
CCDC54-201ENST00000261058 SLC27A1Q6PCB7 646 aa4.07□□□□□ -1.76
CCDC54-201ENST00000261058 TRAT1Q6PIZ9 186 aa4.07□□□□□ -1.76
CCDC54-201ENST00000261058 MFN1Q8IWA4 741 aa4.07□□□□□ -1.76
CCDC54-201ENST00000261058 MAPKAPK5-AS1Q8N8E1 139 aa4.07□□□□□ -1.76
CCDC54-201ENST00000261058 TRIM58Q8NG06 486 aa4.07□□□□□ -1.76
CCDC54-201ENST00000261058 SYN2Q92777 582 aaPredicted RBP4.07□□□□□ -1.76
CCDC54-201ENST00000261058 RMDN2Q96LZ7 410 aa4.07□□□□□ -1.76
CCDC54-201ENST00000261058 RAB3IPQ96QF0 476 aaPredicted RBP4.07□□□□□ -1.76
CCDC54-201ENST00000261058 RAD9AQ99638 391 aa4.07□□□□□ -1.76
CCDC54-201ENST00000261058 Q9H8V8 135 aa4.07□□□□□ -1.76
CCDC54-201ENST00000261058 UPF2Q9HAU5 1272 aaKnown RBP4.07□□□□□ -1.76
CCDC54-201ENST00000261058 A4GALTQ9NPC4 353 aa4.07□□□□□ -1.76
CCDC54-201ENST00000261058 GKN1Q9NS71 199 aa4.07□□□□□ -1.76
CCDC54-201ENST00000261058 PDRG1Q9NUG6 133 aa4.07□□□□□ -1.76
CCDC54-201ENST00000261058 MRGBPQ9NV56 204 aa4.07□□□□□ -1.76
CCDC54-201ENST00000261058 WWOXQ9NZC7 414 aa4.07□□□□□ -1.76
CCDC54-201ENST00000261058 PTTG2Q9NZH5 202 aa4.07□□□□□ -1.76
CCDC54-201ENST00000261058 IFITM10A6NMD0 228 aa4.06□□□□□ -1.76
CCDC54-201ENST00000261058 ANXA2P2A6NMY6 339 aa4.06□□□□□ -1.76
CCDC54-201ENST00000261058 IKBKBO14920 756 aa4.06□□□□□ -1.76
CCDC54-201ENST00000261058 CLIC2O15247 247 aa4.06□□□□□ -1.76
CCDC54-201ENST00000261058 LMX1BO60663 402 aa4.06□□□□□ -1.76
CCDC54-201ENST00000261058 UMODP07911 640 aa4.06□□□□□ -1.76
CCDC54-201ENST00000261058 FRMD6-AS1P0C7T7 363 aa4.06□□□□□ -1.76
CCDC54-201ENST00000261058 SMIM18P0DKX4 95 aa4.06□□□□□ -1.76
CCDC54-201ENST00000261058 SAGP10523 405 aaPredicted RBP4.06□□□□□ -1.76
CCDC54-201ENST00000261058 EPCAMP16422 314 aa4.06□□□□□ -1.76
CCDC54-201ENST00000261058 EFNA1P20827 205 aaPredicted RBP4.06□□□□□ -1.76
CCDC54-201ENST00000261058 GP5P40197 560 aa4.06□□□□□ -1.76
CCDC54-201ENST00000261058 NPY4RP50391 375 aa4.06□□□□□ -1.76
CCDC54-201ENST00000261058 ALDH3A2P51648 485 aa4.06□□□□□ -1.76
CCDC54-201ENST00000261058 PDX1P52945 283 aa4.06□□□□□ -1.76
CCDC54-201ENST00000261058 KRTAP10-9P60411 292 aa4.06□□□□□ -1.76
CCDC54-201ENST00000261058 CUL3Q13618 768 aa4.06□□□□□ -1.76
CCDC54-201ENST00000261058 PTPN14Q15678 1187 aa4.06□□□□□ -1.76
CCDC54-201ENST00000261058 ITPRIPL2Q3MIP1 535 aa4.06□□□□□ -1.76
CCDC54-201ENST00000261058 KLHL22Q53GT1 634 aa4.06□□□□□ -1.76
CCDC54-201ENST00000261058 CATSPER4Q7RTX7 472 aa4.06□□□□□ -1.76
CCDC54-201ENST00000261058 GLRX5Q86SX6 157 aa4.06□□□□□ -1.76
CCDC54-201ENST00000261058 TLK2Q86UE8 772 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms