RNA–Protein interactions for RNA: ENST00000259043.11

TRA2B-201, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-201ENST00000259043 ENTPD3O75355 529 aa4.62□□□□□ -1.67
TRA2B-201ENST00000259043 CNMDO75829 334 aa4.62□□□□□ -1.67
TRA2B-201ENST00000259043 PAK4O96013 591 aaPredicted RBP4.62□□□□□ -1.67
TRA2B-201ENST00000259043 SRPRAP08240 638 aaKnown RBP4.62□□□□□ -1.67
TRA2B-201ENST00000259043 CFC1BP0CG36 223 aa4.62□□□□□ -1.67
TRA2B-201ENST00000259043 CFC1P0CG37 223 aa4.62□□□□□ -1.67
TRA2B-201ENST00000259043 ACTN1P12814 892 aa4.62□□□□□ -1.67
TRA2B-201ENST00000259043 MYOD1P15172 320 aa4.62□□□□□ -1.67
TRA2B-201ENST00000259043 TIMP3P35625 211 aa4.62□□□□□ -1.67
TRA2B-201ENST00000259043 USP8P40818 1118 aa4.62□□□□□ -1.67
TRA2B-201ENST00000259043 NRIP1P48552 1158 aa4.62□□□□□ -1.67
TRA2B-201ENST00000259043 MFAP4P55083 255 aa4.62□□□□□ -1.67
TRA2B-201ENST00000259043 MRPS5P82675 430 aaKnown RBP4.62□□□□□ -1.67
TRA2B-201ENST00000259043 IKQ13123 557 aaPredicted RBP4.62□□□□□ -1.67
TRA2B-201ENST00000259043 SHROOM1Q2M3G4 852 aaPredicted RBP4.62□□□□□ -1.67
TRA2B-201ENST00000259043 COL28A1Q2UY09 1125 aa4.62□□□□□ -1.67
TRA2B-201ENST00000259043 PCGF3Q3KNV8 242 aa4.62□□□□□ -1.67
TRA2B-201ENST00000259043 C6orf141Q5SZD1 244 aa4.62□□□□□ -1.67
TRA2B-201ENST00000259043 TRNP1Q6NT89 227 aa4.62□□□□□ -1.67
TRA2B-201ENST00000259043 RPUSD3Q6P087 351 aaKnown RBP4.62□□□□□ -1.67
TRA2B-201ENST00000259043 C19orf48Q6RUI8 117 aa4.62□□□□□ -1.67
TRA2B-201ENST00000259043 GPR142Q7Z601 462 aa4.62□□□□□ -1.67
TRA2B-201ENST00000259043 DNAAF5Q86Y56 855 aa4.62□□□□□ -1.67
TRA2B-201ENST00000259043 KMT5CQ86Y97 462 aa4.62□□□□□ -1.67
TRA2B-201ENST00000259043 RNF168Q8IYW5 571 aaPredicted RBP4.62□□□□□ -1.67
TRA2B-201ENST00000259043 PCDH20Q8N6Y1 951 aaKnown RBP4.62□□□□□ -1.67
TRA2B-201ENST00000259043 NKAIN3Q8N8D7 197 aa4.62□□□□□ -1.67
TRA2B-201ENST00000259043 SYT2Q8N9I0 419 aaPredicted RBP4.62□□□□□ -1.67
TRA2B-201ENST00000259043 HARBI1Q96MB7 349 aa4.62□□□□□ -1.67
TRA2B-201ENST00000259043 EPYCQ99645 322 aa4.62□□□□□ -1.67
TRA2B-201ENST00000259043 CMKLR1Q99788 373 aa4.62□□□□□ -1.67
TRA2B-201ENST00000259043 APOL6Q9BWW8 343 aa4.62□□□□□ -1.67
TRA2B-201ENST00000259043 MRPL1Q9BYD6 325 aaKnown RBP4.62□□□□□ -1.67
TRA2B-201ENST00000259043 OSGEPL1Q9H4B0 414 aa4.62□□□□□ -1.67
TRA2B-201ENST00000259043 PDZD7Q9H5P4 517 aa4.62□□□□□ -1.67
TRA2B-201ENST00000259043 RANGRFQ9HD47 186 aaPredicted RBP4.62□□□□□ -1.67
TRA2B-201ENST00000259043 TAB2Q9NYJ8 693 aa4.62□□□□□ -1.67
TRA2B-201ENST00000259043 NENFQ9UMX5 172 aa4.62□□□□□ -1.67
TRA2B-201ENST00000259043 MAU2Q9Y6X3 613 aa4.62□□□□□ -1.67
TRA2B-201ENST00000259043 FAM169AQ9Y6X4 670 aa4.62□□□□□ -1.67
TRA2B-201ENST00000259043 USP34Q70CQ2 3546 aa4.62□□□□□ -1.67
TRA2B-201ENST00000259043 GAKO14976 1311 aa4.62□□□□□ -1.67
TRA2B-201ENST00000259043 MROH5Q6ZUA9 1318 aa4.62□□□□□ -1.67
TRA2B-201ENST00000259043 KIF16BQ96L93 1317 aa4.62□□□□□ -1.67
TRA2B-201ENST00000259043 A0A0G2JMZ2 1700 aa4.61□□□□□ -1.67
TRA2B-201ENST00000259043 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.61□□□□□ -1.67
TRA2B-201ENST00000259043 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.61□□□□□ -1.67
TRA2B-201ENST00000259043 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.61□□□□□ -1.67
TRA2B-201ENST00000259043 GLOD5A6NK44 160 aa4.61□□□□□ -1.67
TRA2B-201ENST00000259043 TSPY2A6NKD2 308 aa4.61□□□□□ -1.67
TRA2B-201ENST00000259043 NKX2-2O95096 273 aa4.61□□□□□ -1.67
TRA2B-201ENST00000259043 CGAP01215 116 aa4.61□□□□□ -1.67
TRA2B-201ENST00000259043 RPN1P04843 607 aaKnown RBP4.61□□□□□ -1.67
TRA2B-201ENST00000259043 TSPY3P0CV98 308 aa4.61□□□□□ -1.67
TRA2B-201ENST00000259043 TSPY8P0CW00 308 aa4.61□□□□□ -1.67
TRA2B-201ENST00000259043 CYBAP13498 195 aa4.61□□□□□ -1.67
TRA2B-201ENST00000259043 CAMPP49913 170 aa4.61□□□□□ -1.67
TRA2B-201ENST00000259043 HSD17B4P51659 736 aa4.61□□□□□ -1.67
TRA2B-201ENST00000259043 GALCP54803 685 aa4.61□□□□□ -1.67
TRA2B-201ENST00000259043 PITX1P78337 314 aaPredicted RBP4.61□□□□□ -1.67
TRA2B-201ENST00000259043 TSPY1Q01534 308 aa4.61□□□□□ -1.67
TRA2B-201ENST00000259043 ASTE1Q2TB18 679 aaPredicted RBP4.61□□□□□ -1.67
TRA2B-201ENST00000259043 TWISTNBQ3B726 338 aaPredicted RBP4.61□□□□□ -1.67
TRA2B-201ENST00000259043 USP41Q3LFD5 358 aa4.61□□□□□ -1.67
TRA2B-201ENST00000259043 ALDH1L2Q3SY69 923 aa4.61□□□□□ -1.67
TRA2B-201ENST00000259043 RABL6Q3YEC7 729 aaPredicted RBP4.61□□□□□ -1.67
TRA2B-201ENST00000259043 CAVIN4Q5BKX8 364 aa4.61□□□□□ -1.67
TRA2B-201ENST00000259043 TCP11X2Q5H9J9 407 aa4.61□□□□□ -1.67
TRA2B-201ENST00000259043 STXBP5Q5T5C0 1151 aa4.61□□□□□ -1.67
TRA2B-201ENST00000259043 ARMC3Q5W041 872 aa4.61□□□□□ -1.67
TRA2B-201ENST00000259043 ACSM2BQ68CK6 577 aa4.61□□□□□ -1.67
TRA2B-201ENST00000259043 NFE4Q86UQ8 179 aa4.61□□□□□ -1.67
TRA2B-201ENST00000259043 NRROSQ86YC3 692 aa4.61□□□□□ -1.67
TRA2B-201ENST00000259043 RNF113BQ8IZP6 322 aaKnown RBP4.61□□□□□ -1.67
TRA2B-201ENST00000259043 BEST3Q8N1M1 668 aa4.61□□□□□ -1.67
TRA2B-201ENST00000259043 SCML4Q8N228 414 aa4.61□□□□□ -1.67
TRA2B-201ENST00000259043 KCTD6Q8NC69 237 aa4.61□□□□□ -1.67
TRA2B-201ENST00000259043 OR13A1Q8NGR1 328 aa4.61□□□□□ -1.67
TRA2B-201ENST00000259043 UBE2Q2Q8WVN8 375 aa4.61□□□□□ -1.67
TRA2B-201ENST00000259043 SLC22A18Q96BI1 424 aa4.61□□□□□ -1.67
TRA2B-201ENST00000259043 ZNF653Q96CK0 615 aa4.61□□□□□ -1.67
TRA2B-201ENST00000259043 GRAMD2BQ96HH9 432 aa4.61□□□□□ -1.67
TRA2B-201ENST00000259043 SPATA17Q96L03 361 aa4.61□□□□□ -1.67
TRA2B-201ENST00000259043 SEPT5Q99719 369 aaPredicted RBP4.61□□□□□ -1.67
TRA2B-201ENST00000259043 C1QTNF5Q9BXJ0 243 aa4.61□□□□□ -1.67
TRA2B-201ENST00000259043 IFIH1Q9BYX4 1025 aaKnown RBP4.61□□□□□ -1.67
TRA2B-201ENST00000259043 OR10A4Q9H209 315 aa4.61□□□□□ -1.67
TRA2B-201ENST00000259043 CCDC177Q9NQR7 707 aaPredicted RBP4.61□□□□□ -1.67
TRA2B-201ENST00000259043 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.61□□□□□ -1.67
TRA2B-201ENST00000259043 ABCF3Q9NUQ8 709 aa4.61□□□□□ -1.67
TRA2B-201ENST00000259043 CNOT8Q9UFF9 292 aaKnown RBP4.61□□□□□ -1.67
TRA2B-201ENST00000259043 PADI3Q9ULW8 664 aa4.61□□□□□ -1.67
TRA2B-201ENST00000259043 PPIEQ9UNP9 301 aaKnown RBP4.61□□□□□ -1.67
TRA2B-201ENST00000259043 LOXL2Q9Y4K0 774 aa4.61□□□□□ -1.67
TRA2B-201ENST00000259043 MAGED1Q9Y5V3 778 aaPredicted RBP4.61□□□□□ -1.67
TRA2B-201ENST00000259043 TRIOO75962 3097 aa4.61□□□□□ -1.67
TRA2B-201ENST00000259043 COL4A4P53420 1690 aaPredicted RBP4.61□□□□□ -1.67
TRA2B-201ENST00000259043 ZNF318Q5VUA4 2279 aa4.6□□□□□ -1.67
TRA2B-201ENST00000259043 FGF17O60258 216 aa4.6□□□□□ -1.67
TRA2B-201ENST00000259043 TBCAO75347 108 aaKnown RBP4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms