RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 PAQR5Q9NXK6 330 aaPredicted RBP11.25□□□□□ -0.61
TROAP-201ENST00000257909 PDP1Q9P0J1 537 aaPredicted RBP11.25□□□□□ -0.61
TROAP-201ENST00000257909 SNX6Q9UNH7 406 aa11.25□□□□□ -0.61
TROAP-201ENST00000257909 MED16Q9Y2X0 877 aa11.25□□□□□ -0.61
TROAP-201ENST00000257909 PCDHGB2Q9Y5G2 931 aa11.25□□□□□ -0.61
TROAP-201ENST00000257909 TRBV5-3A0A0A0MS03 114 aa11.24□□□□□ -0.61
TROAP-201ENST00000257909 LOC100506127A0A0U1RQW1 187 aa11.24□□□□□ -0.61
TROAP-201ENST00000257909 H3BRB1 525 aa11.24□□□□□ -0.61
TROAP-201ENST00000257909 PCDHGA12O60330 932 aa11.24□□□□□ -0.61
TROAP-201ENST00000257909 ERN1O75460 977 aaKnown RBP11.24□□□□□ -0.61
TROAP-201ENST00000257909 CCNDBP1O95273 360 aa11.24□□□□□ -0.61
TROAP-201ENST00000257909 FGF1P05230 155 aa11.24□□□□□ -0.61
TROAP-201ENST00000257909 HLA-DPA1P20036 260 aa11.24□□□□□ -0.61
TROAP-201ENST00000257909 RPP38P78345 283 aaKnown RBP11.24□□□□□ -0.61
TROAP-201ENST00000257909 OLR1P78380 273 aa11.24□□□□□ -0.61
TROAP-201ENST00000257909 CREMQ03060 361 aa11.24□□□□□ -0.61
TROAP-201ENST00000257909 LAPTM4AQ15012 233 aa11.24□□□□□ -0.61
TROAP-201ENST00000257909 ARTNQ5T4W7 220 aa11.24□□□□□ -0.61
TROAP-201ENST00000257909 MLIPQ5VWP3 458 aa11.24□□□□□ -0.61
TROAP-201ENST00000257909 NXNL2Q5VZ03 156 aa11.24□□□□□ -0.61
TROAP-201ENST00000257909 KIAA1841Q6NSI8 718 aa11.24□□□□□ -0.61
TROAP-201ENST00000257909 DLK2Q6UY11 383 aa11.24□□□□□ -0.61
TROAP-201ENST00000257909 PHACTR4Q8IZ21 702 aa11.24□□□□□ -0.61
TROAP-201ENST00000257909 BEND7Q8N7W2 519 aaPredicted RBP11.24□□□□□ -0.61
TROAP-201ENST00000257909 APH1BQ8WW43 257 aa11.24□□□□□ -0.61
TROAP-201ENST00000257909 SDHCQ99643 169 aaPredicted RBP11.24□□□□□ -0.61
TROAP-201ENST00000257909 GPR21Q99679 349 aa11.24□□□□□ -0.61
TROAP-201ENST00000257909 GDF15Q99988 308 aa11.24□□□□□ -0.61
TROAP-201ENST00000257909 SLC30A2Q9BRI3 323 aa11.24□□□□□ -0.61
TROAP-201ENST00000257909 C16orf70Q9BSU1 422 aa11.24□□□□□ -0.61
TROAP-201ENST00000257909 IRF2BPLQ9H1B7 796 aa11.24□□□□□ -0.61
TROAP-201ENST00000257909 MPP6Q9NZW5 540 aa11.24□□□□□ -0.61
TROAP-201ENST00000257909 PSORS1C1Q9UIG5 152 aa11.24□□□□□ -0.61
TROAP-201ENST00000257909 AGO1Q9UL18 857 aaKnown RBP11.24□□□□□ -0.61
TROAP-201ENST00000257909 CFL2Q9Y281 166 aa11.24□□□□□ -0.61
TROAP-201ENST00000257909 H3BQ06 376 aaPredicted RBP11.24□□□□□ -0.61
TROAP-201ENST00000257909 PER2O15055 1255 aa11.24□□□□□ -0.61
TROAP-201ENST00000257909 SSX4O60224 188 aa11.24□□□□□ -0.61
TROAP-201ENST00000257909 ITGB6P18564 788 aa11.24□□□□□ -0.61
TROAP-201ENST00000257909 ENDOUP21128 410 aaKnown RBP11.24□□□□□ -0.61
TROAP-201ENST00000257909 HNF4AP41235 474 aa11.24□□□□□ -0.61
TROAP-201ENST00000257909 RPS5P46782 204 aaKnown RBP11.24□□□□□ -0.61
TROAP-201ENST00000257909 GZMMP51124 257 aa11.24□□□□□ -0.61
TROAP-201ENST00000257909 HK3P52790 923 aa11.24□□□□□ -0.61
TROAP-201ENST00000257909 RPL38P63173 70 aaKnown RBP11.24□□□□□ -0.61
TROAP-201ENST00000257909 TSPY1Q01534 308 aa11.24□□□□□ -0.61
TROAP-201ENST00000257909 NRG1Q02297 640 aaPredicted RBP11.24□□□□□ -0.61
TROAP-201ENST00000257909 NPRL3Q12980 569 aa11.24□□□□□ -0.61
TROAP-201ENST00000257909 IHHQ14623 411 aa11.24□□□□□ -0.61
TROAP-201ENST00000257909 PTGR1Q14914 329 aa11.24□□□□□ -0.61
TROAP-201ENST00000257909 TBRG1Q3YBR2 411 aa11.24□□□□□ -0.61
TROAP-201ENST00000257909 YIF1BQ5BJH7 314 aa11.24□□□□□ -0.61
TROAP-201ENST00000257909 SPANXN4Q5MJ08 99 aa11.24□□□□□ -0.61
TROAP-201ENST00000257909 NRARPQ7Z6K4 114 aa11.24□□□□□ -0.61
TROAP-201ENST00000257909 NOXA1Q86UR1 476 aa11.24□□□□□ -0.61
TROAP-201ENST00000257909 CCDC71Q8IV32 467 aaPredicted RBP11.24□□□□□ -0.61
TROAP-201ENST00000257909 ENTHD1Q8IYW4 607 aa11.24□□□□□ -0.61
TROAP-201ENST00000257909 UMODL1-AS1Q8N2C9 162 aa11.24□□□□□ -0.61
TROAP-201ENST00000257909 ANKK1Q8NFD2 765 aa11.24□□□□□ -0.61
TROAP-201ENST00000257909 OR13C4Q8NGS5 318 aa11.24□□□□□ -0.61
TROAP-201ENST00000257909 TTC9Q92623 222 aa11.24□□□□□ -0.61
TROAP-201ENST00000257909 DNASE1L2Q92874 299 aa11.24□□□□□ -0.61
TROAP-201ENST00000257909 ZFYVE19Q96K21 471 aa11.24□□□□□ -0.61
TROAP-201ENST00000257909 SENP8Q96LD8 212 aa11.24□□□□□ -0.61
TROAP-201ENST00000257909 OR2A14Q96R47 310 aa11.24□□□□□ -0.61
TROAP-201ENST00000257909 ZBED2Q9BTP6 218 aa11.24□□□□□ -0.61
TROAP-201ENST00000257909 SP110Q9HB58 689 aa11.24□□□□□ -0.61
TROAP-201ENST00000257909 RPRD1BQ9NQG5 326 aaKnown RBP11.24□□□□□ -0.61
TROAP-201ENST00000257909 TBC1D24Q9ULP9 559 aa11.24□□□□□ -0.61
TROAP-201ENST00000257909 ABCG2Q9UNQ0 655 aa11.24□□□□□ -0.61
TROAP-201ENST00000257909 KLK4Q9Y5K2 254 aa11.24□□□□□ -0.61
TROAP-201ENST00000257909 J3KR12 359 aa11.23□□□□□ -0.61
TROAP-201ENST00000257909 ARVCFO00192 962 aa11.23□□□□□ -0.61
TROAP-201ENST00000257909 RGS14O43566 566 aa11.23□□□□□ -0.61
TROAP-201ENST00000257909 ICMTO60725 284 aa11.23□□□□□ -0.61
TROAP-201ENST00000257909 VPS26AO75436 327 aa11.23□□□□□ -0.61
TROAP-201ENST00000257909 NDUFS3O75489 264 aa11.23□□□□□ -0.61
TROAP-201ENST00000257909 CDK1P06493 297 aa11.23□□□□□ -0.61
TROAP-201ENST00000257909 LIMK1P53667 647 aa11.23□□□□□ -0.61
TROAP-201ENST00000257909 BNC1Q01954 994 aa11.23□□□□□ -0.61
TROAP-201ENST00000257909 ABHD18Q0P651 414 aa11.23□□□□□ -0.61
TROAP-201ENST00000257909 PTPRCAPQ14761 206 aa11.23□□□□□ -0.61
TROAP-201ENST00000257909 PUS10Q3MIT2 529 aaKnown RBP11.23□□□□□ -0.61
TROAP-201ENST00000257909 TOR1AIP1Q5JTV8 583 aa11.23□□□□□ -0.61
TROAP-201ENST00000257909 CACHD1Q5VU97 1274 aa11.23□□□□□ -0.61
TROAP-201ENST00000257909 MSANTD2Q6P1R3 559 aa11.23□□□□□ -0.61
TROAP-201ENST00000257909 TMEM132CQ8N3T6 1108 aa11.23□□□□□ -0.61
TROAP-201ENST00000257909 CARNMT1Q8N4J0 409 aa11.23□□□□□ -0.61
TROAP-201ENST00000257909 TEX26Q8N6G2 289 aa11.23□□□□□ -0.61
TROAP-201ENST00000257909 ATG16L2Q8NAA4 619 aa11.23□□□□□ -0.61
TROAP-201ENST00000257909 LSM14AQ8ND56 463 aaKnown RBP11.23□□□□□ -0.61
TROAP-201ENST00000257909 ARRDC2Q8TBH0 407 aa11.23□□□□□ -0.61
TROAP-201ENST00000257909 ZNF675Q8TD23 568 aa11.23□□□□□ -0.61
TROAP-201ENST00000257909 CDKN2AIPNLQ96HQ2 116 aa11.23□□□□□ -0.61
TROAP-201ENST00000257909 HRASLS5Q96KN8 279 aa11.23□□□□□ -0.61
TROAP-201ENST00000257909 DMRTB1Q96MA1 342 aa11.23□□□□□ -0.61
TROAP-201ENST00000257909 RIPOR3Q96MK2 946 aa11.23□□□□□ -0.61
TROAP-201ENST00000257909 KLHL5Q96PQ7 755 aa11.23□□□□□ -0.61
TROAP-201ENST00000257909 OR52E6Q96RD3 313 aa11.23□□□□□ -0.61
TROAP-201ENST00000257909 HBEGFQ99075 208 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms