RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 OTUD3Q5T2D3 398 aaPredicted RBP14.28□□□□□ -0.12
TRAFD1-201ENST00000257604 MPP7Q5T2T1 576 aa14.28□□□□□ -0.12
TRAFD1-201ENST00000257604 RBM12BQ8IXT5 1001 aaKnown RBP14.28□□□□□ -0.12
TRAFD1-201ENST00000257604 CFAP206Q8IYR0 622 aa14.28□□□□□ -0.12
TRAFD1-201ENST00000257604 PROKR1Q8TCW9 393 aa14.28□□□□□ -0.12
TRAFD1-201ENST00000257604 CLP1Q92989 425 aaKnown RBP14.28□□□□□ -0.12
TRAFD1-201ENST00000257604 ISOC1Q96CN7 298 aa14.28□□□□□ -0.12
TRAFD1-201ENST00000257604 GID8Q9NWU2 228 aa14.28□□□□□ -0.12
TRAFD1-201ENST00000257604 KCTD5Q9NXV2 234 aa14.28□□□□□ -0.12
TRAFD1-201ENST00000257604 BLOC1S6Q9UL45 172 aa14.28□□□□□ -0.12
TRAFD1-201ENST00000257604 TMEM98Q9Y2Y6 226 aa14.28□□□□□ -0.12
TRAFD1-201ENST00000257604 TNPO3Q9Y5L0 923 aaKnown RBP14.28□□□□□ -0.12
TRAFD1-201ENST00000257604 COL4A4P53420 1690 aaPredicted RBP14.28□□□□□ -0.12
TRAFD1-201ENST00000257604 SAP18O00422 153 aaKnown RBP14.28□□□□□ -0.12
TRAFD1-201ENST00000257604 GFRA2O00451 464 aa14.28□□□□□ -0.12
TRAFD1-201ENST00000257604 ATE1O95260 518 aa14.28□□□□□ -0.12
TRAFD1-201ENST00000257604 EPHX1P07099 455 aa14.28□□□□□ -0.12
TRAFD1-201ENST00000257604 TIMP2P16035 220 aa14.28□□□□□ -0.12
TRAFD1-201ENST00000257604 SLC6A2P23975 617 aa14.28□□□□□ -0.12
TRAFD1-201ENST00000257604 ERVK-8P63133 956 aa14.28□□□□□ -0.12
TRAFD1-201ENST00000257604 MEF2AQ02078 507 aaPredicted RBP14.28□□□□□ -0.12
TRAFD1-201ENST00000257604 CBX3Q13185 183 aa14.28□□□□□ -0.12
TRAFD1-201ENST00000257604 SELPLGQ14242 412 aa14.28□□□□□ -0.12
TRAFD1-201ENST00000257604 HERC3Q15034 1050 aa14.28□□□□□ -0.12
TRAFD1-201ENST00000257604 FGD3Q5JSP0 725 aa14.28□□□□□ -0.12
TRAFD1-201ENST00000257604 SPANXN4Q5MJ08 99 aa14.28□□□□□ -0.12
TRAFD1-201ENST00000257604 C1orf53Q5VUE5 145 aa14.28□□□□□ -0.12
TRAFD1-201ENST00000257604 RAVER1Q8IY67 606 aaKnown RBP14.28□□□□□ -0.12
TRAFD1-201ENST00000257604 TMEM159Q96B96 161 aa14.28□□□□□ -0.12
TRAFD1-201ENST00000257604 DPY30Q9C005 99 aa14.28□□□□□ -0.12
TRAFD1-201ENST00000257604 CLK4Q9HAZ1 481 aaKnown RBP14.28□□□□□ -0.12
TRAFD1-201ENST00000257604 SDR39U1Q9NRG7 319 aaPredicted RBP14.28□□□□□ -0.12
TRAFD1-201ENST00000257604 PNPLA3Q9NST1 481 aa14.28□□□□□ -0.12
TRAFD1-201ENST00000257604 RBMX2Q9Y388 322 aaKnown RBP14.28□□□□□ -0.12
TRAFD1-201ENST00000257604 CFAP99D6REC4 459 aa14.28□□□□□ -0.12
TRAFD1-201ENST00000257604 K7EPI3 171 aa14.28□□□□□ -0.12
TRAFD1-201ENST00000257604 MAN1A2O60476 641 aa14.28□□□□□ -0.12
TRAFD1-201ENST00000257604 ALDH3B2P48448 385 aa14.28□□□□□ -0.12
TRAFD1-201ENST00000257604 SEC13P55735 322 aa14.28□□□□□ -0.12
TRAFD1-201ENST00000257604 HTRA4P83105 476 aaPredicted RBP14.28□□□□□ -0.12
TRAFD1-201ENST00000257604 TXNL4AP83876 142 aaKnown RBP14.28□□□□□ -0.12
TRAFD1-201ENST00000257604 TRAF3Q13114 568 aa14.28□□□□□ -0.12
TRAFD1-201ENST00000257604 FAM180BQ6P0A1 224 aa14.28□□□□□ -0.12
TRAFD1-201ENST00000257604 BORAQ6PGQ7 559 aa14.28□□□□□ -0.12
TRAFD1-201ENST00000257604 BLOC1S3Q6QNY0 202 aa14.28□□□□□ -0.12
TRAFD1-201ENST00000257604 SYTL1Q8IYJ3 562 aa14.28□□□□□ -0.12
TRAFD1-201ENST00000257604 RNF145Q96MT1 663 aa14.28□□□□□ -0.12
TRAFD1-201ENST00000257604 PARVBQ9HBI1 364 aa14.28□□□□□ -0.12
TRAFD1-201ENST00000257604 LTB4R2Q9NPC1 389 aa14.28□□□□□ -0.12
TRAFD1-201ENST00000257604 SMOXQ9NWM0 555 aa14.28□□□□□ -0.12
TRAFD1-201ENST00000257604 PLAGL1Q9UM63 463 aa14.28□□□□□ -0.12
TRAFD1-201ENST00000257604 LATO43561 262 aa14.27□□□□□ -0.12
TRAFD1-201ENST00000257604 ADSLP30566 484 aaPredicted RBP14.27□□□□□ -0.12
TRAFD1-201ENST00000257604 GPR33Q49SQ1 333 aa14.27□□□□□ -0.12
TRAFD1-201ENST00000257604 SUSD1Q6UWL2 747 aa14.27□□□□□ -0.12
TRAFD1-201ENST00000257604 ANGPTL8Q6UXH0 198 aa14.27□□□□□ -0.12
TRAFD1-201ENST00000257604 GCNT7Q6ZNI0 430 aa14.27□□□□□ -0.12
TRAFD1-201ENST00000257604 FBXO30Q8TB52 745 aa14.27□□□□□ -0.12
TRAFD1-201ENST00000257604 VPS50Q96JG6 964 aa14.27□□□□□ -0.12
TRAFD1-201ENST00000257604 ZNF382Q96SR6 550 aa14.27□□□□□ -0.12
TRAFD1-201ENST00000257604 ALG2Q9H553 416 aa14.27□□□□□ -0.12
TRAFD1-201ENST00000257604 DEC1Q9P2X7 70 aa14.27□□□□□ -0.12
TRAFD1-201ENST00000257604 PCDH8O95206 1070 aa14.27□□□□□ -0.13
TRAFD1-201ENST00000257604 PDYNP01213 254 aa14.27□□□□□ -0.13
TRAFD1-201ENST00000257604 HSPA1AP0DMV8 641 aaKnown RBP14.27□□□□□ -0.13
TRAFD1-201ENST00000257604 HSPA1BP0DMV9 641 aaKnown RBP14.27□□□□□ -0.13
TRAFD1-201ENST00000257604 SOX9P48436 509 aa14.27□□□□□ -0.13
TRAFD1-201ENST00000257604 CHIT1Q13231 466 aa14.27□□□□□ -0.13
TRAFD1-201ENST00000257604 FAM78AQ5JUQ0 283 aa14.27□□□□□ -0.13
TRAFD1-201ENST00000257604 PARS2Q7L3T8 475 aaKnown RBP14.27□□□□□ -0.13
TRAFD1-201ENST00000257604 PATL1Q86TB9 770 aaKnown RBP14.27□□□□□ -0.13
TRAFD1-201ENST00000257604 TMEM126BQ8IUX1 230 aa14.27□□□□□ -0.13
TRAFD1-201ENST00000257604 OSBPL6Q9BZF3 934 aa14.27□□□□□ -0.13
TRAFD1-201ENST00000257604 AIG1Q9NVV5 245 aa14.27□□□□□ -0.13
TRAFD1-201ENST00000257604 SELENONQ9NZV5 590 aa14.27□□□□□ -0.13
TRAFD1-201ENST00000257604 TBC1D14Q9P2M4 693 aa14.27□□□□□ -0.13
TRAFD1-201ENST00000257604 VPS4AQ9UN37 437 aa14.27□□□□□ -0.13
TRAFD1-201ENST00000257604 GSTA4O15217 222 aa14.26□□□□□ -0.13
TRAFD1-201ENST00000257604 DFNA5O60443 496 aa14.26□□□□□ -0.13
TRAFD1-201ENST00000257604 VARSP26640 1264 aaKnown RBP14.26□□□□□ -0.13
TRAFD1-201ENST00000257604 RXRGP48443 463 aa14.26□□□□□ -0.13
TRAFD1-201ENST00000257604 PSMD8P48556 350 aa14.26□□□□□ -0.13
TRAFD1-201ENST00000257604 GSK3BP49841 420 aa14.26□□□□□ -0.13
TRAFD1-201ENST00000257604 ESRRGP62508 458 aa14.26□□□□□ -0.13
TRAFD1-201ENST00000257604 IRF8Q02556 426 aa14.26□□□□□ -0.13
TRAFD1-201ENST00000257604 PIGFQ07326 219 aa14.26□□□□□ -0.13
TRAFD1-201ENST00000257604 ZNF77Q15935 545 aa14.26□□□□□ -0.13
TRAFD1-201ENST00000257604 XKR6Q5GH73 641 aa14.26□□□□□ -0.13
TRAFD1-201ENST00000257604 NANOGP8Q6NSW7 305 aa14.26□□□□□ -0.13
TRAFD1-201ENST00000257604 MCOLN3Q8TDD5 553 aa14.26□□□□□ -0.13
TRAFD1-201ENST00000257604 SGCDQ92629 289 aa14.26□□□□□ -0.13
TRAFD1-201ENST00000257604 FGF13Q92913 245 aa14.26□□□□□ -0.13
TRAFD1-201ENST00000257604 RETREG1Q9H6L5 497 aa14.26□□□□□ -0.13
TRAFD1-201ENST00000257604 NANOGQ9H9S0 305 aa14.26□□□□□ -0.13
TRAFD1-201ENST00000257604 DYRK4Q9NR20 520 aa14.26□□□□□ -0.13
TRAFD1-201ENST00000257604 OARD1Q9Y530 152 aa14.26□□□□□ -0.13
TRAFD1-201ENST00000257604 TACR1P25103 407 aa14.26□□□□□ -0.13
TRAFD1-201ENST00000257604 NHSL2Q5HYW2 709 aa14.26□□□□□ -0.13
TRAFD1-201ENST00000257604 FAM217AQ8IXS0 508 aa14.26□□□□□ -0.13
TRAFD1-201ENST00000257604 KIAA2013Q8IYS2 634 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms