RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 STC1P52823 247 aa18.56■□□□□ 0.56
PTPRE-201ENST00000254667 PQLC3Q8N755 202 aa18.56■□□□□ 0.56
PTPRE-201ENST00000254667 POPDC3Q9HBV1 291 aa18.56■□□□□ 0.56
PTPRE-201ENST00000254667 NEMP2A6NFY4 417 aa18.56■□□□□ 0.56
PTPRE-201ENST00000254667 hCG_2039718K7EN88 272 aa18.56■□□□□ 0.56
PTPRE-201ENST00000254667 ZNF623O75123 536 aa18.56■□□□□ 0.56
PTPRE-201ENST00000254667 TRMUO75648 421 aaKnown RBP18.56■□□□□ 0.56
PTPRE-201ENST00000254667 AP2A2O94973 939 aa18.56■□□□□ 0.56
PTPRE-201ENST00000254667 NCK1P16333 377 aa18.56■□□□□ 0.56
PTPRE-201ENST00000254667 EDNRBP24530 442 aa18.56■□□□□ 0.56
PTPRE-201ENST00000254667 TAS2R50P59544 299 aa18.56■□□□□ 0.56
PTPRE-201ENST00000254667 FOXM1Q08050 763 aa18.56■□□□□ 0.56
PTPRE-201ENST00000254667 AMIGO3Q86WK7 504 aa18.56■□□□□ 0.56
PTPRE-201ENST00000254667 TSGA13Q96PP4 275 aa18.56■□□□□ 0.56
PTPRE-201ENST00000254667 BTBD1Q9H0C5 482 aa18.56■□□□□ 0.56
PTPRE-201ENST00000254667 ZNF142P52746 1687 aaPredicted RBP18.56■□□□□ 0.56
PTPRE-201ENST00000254667 LCHNA4D1U4 455 aa18.56■□□□□ 0.56
PTPRE-201ENST00000254667 GALTP07902 379 aa18.56■□□□□ 0.56
PTPRE-201ENST00000254667 RYKP34925 604 aa18.56■□□□□ 0.56
PTPRE-201ENST00000254667 MTPNP58546 118 aa18.56■□□□□ 0.56
PTPRE-201ENST00000254667 ADGRE1Q14246 886 aa18.56■□□□□ 0.56
PTPRE-201ENST00000254667 INAVAQ3KP66 663 aa18.56■□□□□ 0.56
PTPRE-201ENST00000254667 GPR151Q8TDV0 419 aa18.56■□□□□ 0.56
PTPRE-201ENST00000254667 IRF7Q92985 503 aa18.56■□□□□ 0.56
PTPRE-201ENST00000254667 PDCD10Q9BUL8 212 aa18.56■□□□□ 0.56
PTPRE-201ENST00000254667 ZCCHC3Q9NUD5 404 aaKnown RBP18.56■□□□□ 0.56
PTPRE-201ENST00000254667 MOCS1Q9NZB8 636 aa18.56■□□□□ 0.56
PTPRE-201ENST00000254667 WNT6Q9Y6F9 365 aa18.56■□□□□ 0.56
PTPRE-201ENST00000254667 POP7O75817 140 aaKnown RBP18.55■□□□□ 0.56
PTPRE-201ENST00000254667 PRKCHP24723 683 aa18.55■□□□□ 0.56
PTPRE-201ENST00000254667 ROR2Q01974 943 aaKnown RBP18.55■□□□□ 0.56
PTPRE-201ENST00000254667 ZNF358Q9NW07 568 aa18.55■□□□□ 0.56
PTPRE-201ENST00000254667 LOC110117498-PIK3R3F6TDL0 507 aa18.55■□□□□ 0.56
PTPRE-201ENST00000254667 KMOO15229 486 aa18.55■□□□□ 0.56
PTPRE-201ENST00000254667 SOCS5O75159 536 aa18.55■□□□□ 0.56
PTPRE-201ENST00000254667 CLCN4P51793 760 aa18.55■□□□□ 0.56
PTPRE-201ENST00000254667 MYBPC3Q14896 1274 aa18.55■□□□□ 0.56
PTPRE-201ENST00000254667 FBXO15Q8NCQ5 510 aaPredicted RBP18.55■□□□□ 0.56
PTPRE-201ENST00000254667 NODALQ96S42 347 aa18.55■□□□□ 0.56
PTPRE-201ENST00000254667 EBF4Q9BQW3 602 aa18.55■□□□□ 0.56
PTPRE-201ENST00000254667 OSBPL7Q9BZF2 842 aa18.55■□□□□ 0.56
PTPRE-201ENST00000254667 CDH7Q9ULB5 785 aa18.55■□□□□ 0.56
PTPRE-201ENST00000254667 GPC6Q9Y625 555 aaPredicted RBP18.55■□□□□ 0.56
PTPRE-201ENST00000254667 BCAP31P51572 246 aa18.55■□□□□ 0.56
PTPRE-201ENST00000254667 SLC18A2Q05940 514 aa18.55■□□□□ 0.56
PTPRE-201ENST00000254667 PCDH1Q08174 1060 aa18.55■□□□□ 0.56
PTPRE-201ENST00000254667 LRRC66Q68CR7 880 aa18.55■□□□□ 0.56
PTPRE-201ENST00000254667 FAM131AQ6UXB0 335 aa18.55■□□□□ 0.56
PTPRE-201ENST00000254667 PIGUQ9H490 435 aa18.55■□□□□ 0.56
PTPRE-201ENST00000254667 TAS2R1Q9NYW7 299 aa18.55■□□□□ 0.56
PTPRE-201ENST00000254667 HCN1O60741 890 aa18.55■□□□□ 0.56
PTPRE-201ENST00000254667 OAS1P00973 400 aaKnown RBP18.55■□□□□ 0.56
PTPRE-201ENST00000254667 SLC7A1P30825 629 aa18.55■□□□□ 0.56
PTPRE-201ENST00000254667 CCKBRP32239 447 aa18.55■□□□□ 0.56
PTPRE-201ENST00000254667 RAB25P57735 213 aa18.55■□□□□ 0.56
PTPRE-201ENST00000254667 SCARB2Q14108 478 aa18.55■□□□□ 0.56
PTPRE-201ENST00000254667 SEMA3AQ14563 771 aa18.55■□□□□ 0.56
PTPRE-201ENST00000254667 BORCS6Q96GS4 357 aa18.55■□□□□ 0.56
PTPRE-201ENST00000254667 AKTIPQ9H8T0 292 aa18.55■□□□□ 0.56
PTPRE-201ENST00000254667 NLE1Q9NVX2 485 aaPredicted RBP18.55■□□□□ 0.56
PTPRE-201ENST00000254667 FBXL12Q9NXK8 326 aa18.55■□□□□ 0.56
PTPRE-201ENST00000254667 ING4Q9UNL4 249 aa18.55■□□□□ 0.56
PTPRE-201ENST00000254667 OAS3Q9Y6K5 1087 aaKnown RBP18.55■□□□□ 0.56
PTPRE-201ENST00000254667 DLX3O60479 287 aa18.54■□□□□ 0.56
PTPRE-201ENST00000254667 CLCNKAP51800 687 aa18.54■□□□□ 0.56
PTPRE-201ENST00000254667 IRF5Q13568 498 aa18.54■□□□□ 0.56
PTPRE-201ENST00000254667 SWT1Q5T5J6 900 aaKnown RBP18.54■□□□□ 0.56
PTPRE-201ENST00000254667 AHSA2Q719I0 299 aa18.54■□□□□ 0.56
PTPRE-201ENST00000254667 LAPTM4BQ86VI4 370 aa18.54■□□□□ 0.56
PTPRE-201ENST00000254667 ZNF641Q96N77 438 aaPredicted RBP18.54■□□□□ 0.56
PTPRE-201ENST00000254667 SLC17A6Q9P2U8 582 aa18.54■□□□□ 0.56
PTPRE-201ENST00000254667 PDE10AQ9Y233 779 aa18.54■□□□□ 0.56
PTPRE-201ENST00000254667 LRP6O75581 1613 aa18.54■□□□□ 0.56
PTPRE-201ENST00000254667 ARHGEF33A8MVX0 844 aa18.54■□□□□ 0.56
PTPRE-201ENST00000254667 ADH1BP00325 375 aa18.54■□□□□ 0.56
PTPRE-201ENST00000254667 CDH1P12830 882 aa18.54■□□□□ 0.56
PTPRE-201ENST00000254667 GPX6P59796 221 aa18.54■□□□□ 0.56
PTPRE-201ENST00000254667 TAS1R3Q7RTX0 852 aa18.54■□□□□ 0.56
PTPRE-201ENST00000254667 NUP54Q7Z3B4 507 aa18.54■□□□□ 0.56
PTPRE-201ENST00000254667 CILP2Q8IUL8 1156 aa18.54■□□□□ 0.56
PTPRE-201ENST00000254667 KIAA1191Q96A73 305 aa18.54■□□□□ 0.56
PTPRE-201ENST00000254667 XYLT2Q9H1B5 865 aa18.54■□□□□ 0.56
PTPRE-201ENST00000254667 FLRT1Q9NZU1 646 aa18.54■□□□□ 0.56
PTPRE-201ENST00000254667 DNAJB4Q9UDY4 337 aa18.54■□□□□ 0.56
PTPRE-201ENST00000254667 TELO2Q9Y4R8 837 aa18.54■□□□□ 0.56
PTPRE-201ENST00000254667 HCRTO43612 131 aa18.54■□□□□ 0.56
PTPRE-201ENST00000254667 MT-ND1P03886 318 aa18.54■□□□□ 0.56
PTPRE-201ENST00000254667 APLP1P51693 650 aa18.54■□□□□ 0.56
PTPRE-201ENST00000254667 KCNC3Q14003 757 aa18.54■□□□□ 0.56
PTPRE-201ENST00000254667 PITRM1Q5JRX3 1037 aa18.54■□□□□ 0.56
PTPRE-201ENST00000254667 GRASPQ7Z6J2 395 aaPredicted RBP18.54■□□□□ 0.56
PTPRE-201ENST00000254667 THOC6Q86W42 341 aaKnown RBP18.54■□□□□ 0.56
PTPRE-201ENST00000254667 NEK7Q8TDX7 302 aa18.54■□□□□ 0.56
PTPRE-201ENST00000254667 PYCR2Q96C36 320 aa18.54■□□□□ 0.56
PTPRE-201ENST00000254667 ZNF570Q96NI8 536 aa18.54■□□□□ 0.56
PTPRE-201ENST00000254667 SLC2A6Q9UGQ3 507 aa18.54■□□□□ 0.56
PTPRE-201ENST00000254667 RBM7Q9Y580 266 aaKnown RBP18.54■□□□□ 0.56
PTPRE-201ENST00000254667 KLHL18O94889 574 aa18.54■□□□□ 0.56
PTPRE-201ENST00000254667 SIX3O95343 332 aaPredicted RBP18.54■□□□□ 0.56
PTPRE-201ENST00000254667 CLCN7P51798 805 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms