RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 TCTN2Q96GX1 697 aa12.34□□□□□ -0.43
VPREB3-201ENST00000248948 LRFN5Q96NI6 719 aa12.34□□□□□ -0.43
VPREB3-201ENST00000248948 NRTNQ99748 197 aa12.34□□□□□ -0.43
VPREB3-201ENST00000248948 SPHK1Q9NYA1 384 aa12.34□□□□□ -0.43
VPREB3-201ENST00000248948 LNPEPQ9UIQ6 1025 aa12.34□□□□□ -0.43
VPREB3-201ENST00000248948 SLC39A10Q9ULF5 831 aa12.34□□□□□ -0.43
VPREB3-201ENST00000248948 RUVBL2Q9Y230 463 aaKnown RBP12.34□□□□□ -0.43
VPREB3-201ENST00000248948 DHRS7Q9Y394 339 aa12.34□□□□□ -0.43
VPREB3-201ENST00000248948 UTP11Q9Y3A2 253 aaKnown RBP12.34□□□□□ -0.43
VPREB3-201ENST00000248948 PCDHB3Q9Y5E6 796 aa12.34□□□□□ -0.43
VPREB3-201ENST00000248948 NFS1Q9Y697 457 aa12.34□□□□□ -0.43
VPREB3-201ENST00000248948 HEATR5BQ9P2D3 2071 aa12.33□□□□□ -0.44
VPREB3-201ENST00000248948 SCRG1O75711 98 aa12.33□□□□□ -0.44
VPREB3-201ENST00000248948 HAUS5O94927 633 aa12.33□□□□□ -0.44
VPREB3-201ENST00000248948 PVRP15151 417 aa12.33□□□□□ -0.44
VPREB3-201ENST00000248948 ILF2Q12905 390 aaKnown RBP12.33□□□□□ -0.44
VPREB3-201ENST00000248948 SRSF6Q13247 344 aaKnown RBP12.33□□□□□ -0.44
VPREB3-201ENST00000248948 ARHGAP19Q14CB8 494 aa12.33□□□□□ -0.44
VPREB3-201ENST00000248948 NAA25Q14CX7 972 aa12.33□□□□□ -0.44
VPREB3-201ENST00000248948 GPR19Q15760 415 aa12.33□□□□□ -0.44
VPREB3-201ENST00000248948 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.33□□□□□ -0.44
VPREB3-201ENST00000248948 PWWP2BQ6NUJ5 590 aa12.33□□□□□ -0.44
VPREB3-201ENST00000248948 FBXO38Q6PIJ6 1188 aa12.33□□□□□ -0.44
VPREB3-201ENST00000248948 C6orf15Q6UXA7 325 aaPredicted RBP12.33□□□□□ -0.44
VPREB3-201ENST00000248948 TMEM126BQ8IUX1 230 aa12.33□□□□□ -0.44
VPREB3-201ENST00000248948 FBXO36Q8NEA4 188 aa12.33□□□□□ -0.44
VPREB3-201ENST00000248948 INPP5DQ92835 1189 aa12.33□□□□□ -0.44
VPREB3-201ENST00000248948 ELMO2Q96JJ3 720 aa12.33□□□□□ -0.44
VPREB3-201ENST00000248948 SLC45A3Q96JT2 553 aa12.33□□□□□ -0.44
VPREB3-201ENST00000248948 PWWP2AQ96N64 755 aa12.33□□□□□ -0.44
VPREB3-201ENST00000248948 GPR21Q99679 349 aa12.33□□□□□ -0.44
VPREB3-201ENST00000248948 FAM117AQ9C073 453 aa12.33□□□□□ -0.44
VPREB3-201ENST00000248948 DPH5Q9H2P9 285 aa12.33□□□□□ -0.44
VPREB3-201ENST00000248948 GPN2Q9H9Y4 310 aaPredicted RBP12.33□□□□□ -0.44
VPREB3-201ENST00000248948 PPANQ9NQ55 473 aaKnown RBP12.33□□□□□ -0.44
VPREB3-201ENST00000248948 INTS7Q9NVH2 962 aaKnown RBP12.33□□□□□ -0.44
VPREB3-201ENST00000248948 WDR70Q9NW82 654 aa12.33□□□□□ -0.44
VPREB3-201ENST00000248948 NSMCE4AQ9NXX6 385 aa12.33□□□□□ -0.44
VPREB3-201ENST00000248948 TAS2R13Q9NYV9 303 aa12.33□□□□□ -0.44
VPREB3-201ENST00000248948 GRHL1Q9NZI5 618 aa12.33□□□□□ -0.44
VPREB3-201ENST00000248948 ZFATQ9P243 1243 aa12.33□□□□□ -0.44
VPREB3-201ENST00000248948 TRMT6Q9UJA5 497 aaKnown RBP12.33□□□□□ -0.44
VPREB3-201ENST00000248948 SPTBP11277 2137 aa12.32□□□□□ -0.44
VPREB3-201ENST00000248948 NUP210LQ5VU65 1888 aa12.32□□□□□ -0.44
VPREB3-201ENST00000248948 ZNF839A8K0R7 811 aa12.32□□□□□ -0.44
VPREB3-201ENST00000248948 ZNF891A8MT65 544 aaPredicted RBP12.32□□□□□ -0.44
VPREB3-201ENST00000248948 ARHGEF33A8MVX0 844 aa12.32□□□□□ -0.44
VPREB3-201ENST00000248948 ISM1B1AKI9 464 aa12.32□□□□□ -0.44
VPREB3-201ENST00000248948 C21orf140B9A014 251 aa12.32□□□□□ -0.44
VPREB3-201ENST00000248948 TERTO14746 1132 aaKnown RBP12.32□□□□□ -0.44
VPREB3-201ENST00000248948 ATXN7O15265 892 aaPredicted RBP12.32□□□□□ -0.44
VPREB3-201ENST00000248948 ITGB2P05107 769 aa12.32□□□□□ -0.44
VPREB3-201ENST00000248948 F7P08709 466 aaPredicted RBP12.32□□□□□ -0.44
VPREB3-201ENST00000248948 HSD17B2P37059 387 aa12.32□□□□□ -0.44
VPREB3-201ENST00000248948 SKIV2L2P42285 1042 aaKnown RBP12.32□□□□□ -0.44
VPREB3-201ENST00000248948 CARSP49589 748 aaKnown RBP12.32□□□□□ -0.44
VPREB3-201ENST00000248948 RGS4P49798 205 aa12.32□□□□□ -0.44
VPREB3-201ENST00000248948 MGAT5Q09328 741 aa12.32□□□□□ -0.44
VPREB3-201ENST00000248948 SP140Q13342 867 aa12.32□□□□□ -0.44
VPREB3-201ENST00000248948 FASTKD3Q14CZ7 662 aaKnown RBP12.32□□□□□ -0.44
VPREB3-201ENST00000248948 CYP2A13Q16696 494 aa12.32□□□□□ -0.44
VPREB3-201ENST00000248948 CRTC2Q53ET0 693 aaPredicted RBP12.32□□□□□ -0.44
VPREB3-201ENST00000248948 TEDDM1Q5T9Z0 273 aa12.32□□□□□ -0.44
VPREB3-201ENST00000248948 C8orf74Q6P047 294 aa12.32□□□□□ -0.44
VPREB3-201ENST00000248948 TRMT10BQ6PF06 316 aaKnown RBP12.32□□□□□ -0.44
VPREB3-201ENST00000248948 CDHR3Q6ZTQ4 885 aa12.32□□□□□ -0.44
VPREB3-201ENST00000248948 TRIM73Q86UV7 250 aa12.32□□□□□ -0.44
VPREB3-201ENST00000248948 SLC26A11Q86WA9 606 aa12.32□□□□□ -0.44
VPREB3-201ENST00000248948 CPNE9Q8IYJ1 553 aa12.32□□□□□ -0.44
VPREB3-201ENST00000248948 ZBED8Q8IZ13 594 aa12.32□□□□□ -0.44
VPREB3-201ENST00000248948 GALNT6Q8NCL4 622 aa12.32□□□□□ -0.44
VPREB3-201ENST00000248948 DENND1AQ8TEH3 1009 aa12.32□□□□□ -0.44
VPREB3-201ENST00000248948 WBP1Q96G27 269 aa12.32□□□□□ -0.44
VPREB3-201ENST00000248948 IL17FQ96PD4 163 aa12.32□□□□□ -0.44
VPREB3-201ENST00000248948 NDNQ99608 321 aa12.32□□□□□ -0.44
VPREB3-201ENST00000248948 SLC30A3Q99726 388 aa12.32□□□□□ -0.44
VPREB3-201ENST00000248948 GALPQ9UBC7 116 aa12.32□□□□□ -0.44
VPREB3-201ENST00000248948 SMG1Q96Q15 3661 aaKnown RBP12.32□□□□□ -0.44
VPREB3-201ENST00000248948 ANKRD12Q6UB98 2062 aa12.31□□□□□ -0.44
VPREB3-201ENST00000248948 LOC101059948A0A1B0GTJ6 334 aa12.31□□□□□ -0.44
VPREB3-201ENST00000248948 TMEM150CB9EJG8 249 aa12.31□□□□□ -0.44
VPREB3-201ENST00000248948 PRICKLE3O43900 615 aaPredicted RBP12.31□□□□□ -0.44
VPREB3-201ENST00000248948 URI1O94763 535 aaPredicted RBP12.31□□□□□ -0.44
VPREB3-201ENST00000248948 CCNYL3P0C7X3 344 aa12.31□□□□□ -0.44
VPREB3-201ENST00000248948 WT1P19544 449 aaPredicted RBP12.31□□□□□ -0.44
VPREB3-201ENST00000248948 CYP2A7P20853 494 aa12.31□□□□□ -0.44
VPREB3-201ENST00000248948 MAGP20916 626 aa12.31□□□□□ -0.44
VPREB3-201ENST00000248948 GABRB3P28472 473 aa12.31□□□□□ -0.44
VPREB3-201ENST00000248948 OAS2P29728 719 aaKnown RBP12.31□□□□□ -0.44
VPREB3-201ENST00000248948 GABRA4P48169 554 aa12.31□□□□□ -0.44
VPREB3-201ENST00000248948 ITGA1P56199 1179 aa12.31□□□□□ -0.44
VPREB3-201ENST00000248948 MRPS25P82663 173 aaKnown RBP12.31□□□□□ -0.44
VPREB3-201ENST00000248948 MC1RQ01726 317 aa12.31□□□□□ -0.44
VPREB3-201ENST00000248948 CUL1Q13616 776 aa12.31□□□□□ -0.44
VPREB3-201ENST00000248948 CCSMST1Q4G0I0 132 aa12.31□□□□□ -0.44
VPREB3-201ENST00000248948 HP1BP3Q5SSJ5 553 aaPredicted RBP12.31□□□□□ -0.44
VPREB3-201ENST00000248948 RBM20Q5T481 1227 aaKnown RBP12.31□□□□□ -0.44
VPREB3-201ENST00000248948 FAM45BPQ6NSW5 357 aa12.31□□□□□ -0.44
VPREB3-201ENST00000248948 ZNF517Q6ZMY9 492 aaPredicted RBP12.31□□□□□ -0.44
VPREB3-201ENST00000248948 ANKMY2Q8IV38 441 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms