RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 NUP214P35658 2090 aaPredicted RBP14.04□□□□□ -0.16
HIF3A-202ENST00000244303 ZNF821O75541 412 aaPredicted RBP14.03□□□□□ -0.16
HIF3A-202ENST00000244303 SEC14L2O76054 403 aa14.03□□□□□ -0.16
HIF3A-202ENST00000244303 B3GALT4O96024 378 aa14.03□□□□□ -0.16
HIF3A-202ENST00000244303 KRT6AP02538 564 aa14.03□□□□□ -0.16
HIF3A-202ENST00000244303 KRT6BP04259 564 aa14.03□□□□□ -0.16
HIF3A-202ENST00000244303 GSNP06396 782 aa14.03□□□□□ -0.16
HIF3A-202ENST00000244303 NSG1P42857 185 aa14.03□□□□□ -0.16
HIF3A-202ENST00000244303 KRT6CP48668 564 aa14.03□□□□□ -0.16
HIF3A-202ENST00000244303 DEFB103AP81534 67 aa14.03□□□□□ -0.16
HIF3A-202ENST00000244303 KCNAB2Q13303 367 aa14.03□□□□□ -0.16
HIF3A-202ENST00000244303 MEP1AQ16819 746 aa14.03□□□□□ -0.16
HIF3A-202ENST00000244303 DDX53Q86TM3 631 aaKnown RBP14.03□□□□□ -0.16
HIF3A-202ENST00000244303 ANKRD46Q86W74 232 aa14.03□□□□□ -0.16
HIF3A-202ENST00000244303 PJA1Q8NG27 643 aa14.03□□□□□ -0.16
HIF3A-202ENST00000244303 NETO1Q8TDF5 533 aa14.03□□□□□ -0.16
HIF3A-202ENST00000244303 SNX19Q92543 992 aa14.03□□□□□ -0.16
HIF3A-202ENST00000244303 HDAC2Q92769 488 aaKnown RBP14.03□□□□□ -0.16
HIF3A-202ENST00000244303 ACDQ96AP0 544 aa14.03□□□□□ -0.16
HIF3A-202ENST00000244303 RBM4BQ9BQ04 359 aaKnown RBP14.03□□□□□ -0.16
HIF3A-202ENST00000244303 RBM4Q9BWF3 364 aaKnown RBP14.03□□□□□ -0.16
HIF3A-202ENST00000244303 SLC29A3Q9BZD2 475 aa14.03□□□□□ -0.16
HIF3A-202ENST00000244303 LHPPQ9H008 270 aa14.03□□□□□ -0.16
HIF3A-202ENST00000244303 SLC32A1Q9H598 525 aa14.03□□□□□ -0.16
HIF3A-202ENST00000244303 PARVBQ9HBI1 364 aa14.03□□□□□ -0.16
HIF3A-202ENST00000244303 SERHLQ9NQF3 203 aa14.03□□□□□ -0.16
HIF3A-202ENST00000244303 KCTD5Q9NXV2 234 aa14.03□□□□□ -0.16
HIF3A-202ENST00000244303 USE1Q9NZ43 259 aa14.03□□□□□ -0.16
HIF3A-202ENST00000244303 SPG21Q9NZD8 308 aa14.03□□□□□ -0.16
HIF3A-202ENST00000244303 KIAA1671Q9BY89 1806 aa14.03□□□□□ -0.16
HIF3A-202ENST00000244303 AGAP14A8MT82 685 aa14.03□□□□□ -0.16
HIF3A-202ENST00000244303 FAM220BPB1ANY3 271 aa14.03□□□□□ -0.16
HIF3A-202ENST00000244303 IGSF6O95976 241 aa14.03□□□□□ -0.16
HIF3A-202ENST00000244303 SERPINA1P01009 418 aa14.03□□□□□ -0.16
HIF3A-202ENST00000244303 RETP07949 1114 aa14.03□□□□□ -0.16
HIF3A-202ENST00000244303 PRKACGP22612 351 aa14.03□□□□□ -0.16
HIF3A-202ENST00000244303 MAGEA8P43361 318 aa14.03□□□□□ -0.16
HIF3A-202ENST00000244303 LMAN2Q12907 356 aa14.03□□□□□ -0.16
HIF3A-202ENST00000244303 EPS8Q12929 822 aa14.03□□□□□ -0.16
HIF3A-202ENST00000244303 BNIP3Q12983 259 aa14.03□□□□□ -0.16
HIF3A-202ENST00000244303 ZXDCQ2QGD7 858 aaPredicted RBP14.03□□□□□ -0.16
HIF3A-202ENST00000244303 ANKDD1AQ495B1 522 aa14.03□□□□□ -0.16
HIF3A-202ENST00000244303 DGKKQ5KSL6 1271 aa14.03□□□□□ -0.16
HIF3A-202ENST00000244303 ATG9BQ674R7 924 aa14.03□□□□□ -0.16
HIF3A-202ENST00000244303 CRTC1Q6UUV9 634 aa14.03□□□□□ -0.16
HIF3A-202ENST00000244303 XKR5Q6UX68 686 aa14.03□□□□□ -0.16
HIF3A-202ENST00000244303 Q6ZNX1 250 aa14.03□□□□□ -0.16
HIF3A-202ENST00000244303 RBM23Q86U06 439 aaKnown RBP14.03□□□□□ -0.16
HIF3A-202ENST00000244303 PLPP6Q8IY26 295 aa14.03□□□□□ -0.16
HIF3A-202ENST00000244303 CBARPQ8N350 705 aaPredicted RBP14.03□□□□□ -0.16
HIF3A-202ENST00000244303 CHDHQ8NE62 594 aaPredicted RBP14.03□□□□□ -0.16
HIF3A-202ENST00000244303 SELENOMQ8WWX9 145 aa14.03□□□□□ -0.16
HIF3A-202ENST00000244303 FAM120BQ96EK7 910 aaKnown RBP14.03□□□□□ -0.16
HIF3A-202ENST00000244303 CPPED1Q9BRF8 314 aaPredicted RBP14.03□□□□□ -0.16
HIF3A-202ENST00000244303 INPP5KQ9BT40 448 aa14.03□□□□□ -0.16
HIF3A-202ENST00000244303 IL21Q9HBE4 155 aa14.03□□□□□ -0.16
HIF3A-202ENST00000244303 TMEM39AQ9NV64 488 aa14.03□□□□□ -0.16
HIF3A-202ENST00000244303 SAGE1Q9NXZ1 904 aa14.03□□□□□ -0.16
HIF3A-202ENST00000244303 PDE10AQ9Y233 779 aa14.03□□□□□ -0.16
HIF3A-202ENST00000244303 ATP11BQ9Y2G3 1177 aa14.03□□□□□ -0.16
HIF3A-202ENST00000244303 HS6ST1O60243 411 aa14.02□□□□□ -0.16
HIF3A-202ENST00000244303 ERN1O75460 977 aaKnown RBP14.02□□□□□ -0.16
HIF3A-202ENST00000244303 ZNF182P17025 639 aaPredicted RBP14.02□□□□□ -0.16
HIF3A-202ENST00000244303 CCNA2P20248 432 aa14.02□□□□□ -0.16
HIF3A-202ENST00000244303 MAP4P27816 1152 aaKnown RBP14.02□□□□□ -0.16
HIF3A-202ENST00000244303 SERPINA4P29622 427 aa14.02□□□□□ -0.16
HIF3A-202ENST00000244303 CCR7P32248 378 aa14.02□□□□□ -0.16
HIF3A-202ENST00000244303 MAPK8P45983 427 aa14.02□□□□□ -0.16
HIF3A-202ENST00000244303 CSNK1DP48730 415 aa14.02□□□□□ -0.16
HIF3A-202ENST00000244303 GZMMP51124 257 aa14.02□□□□□ -0.16
HIF3A-202ENST00000244303 NEK2P51955 445 aa14.02□□□□□ -0.16
HIF3A-202ENST00000244303 TMBIM6P55061 237 aa14.02□□□□□ -0.16
HIF3A-202ENST00000244303 CLDN8P56748 225 aa14.02□□□□□ -0.16
HIF3A-202ENST00000244303 NFATC3Q12968 1075 aa14.02□□□□□ -0.16
HIF3A-202ENST00000244303 CBX3Q13185 183 aa14.02□□□□□ -0.16
HIF3A-202ENST00000244303 CTU2Q2VPK5 515 aaKnown RBP14.02□□□□□ -0.16
HIF3A-202ENST00000244303 LRIF1Q5T3J3 769 aa14.02□□□□□ -0.16
HIF3A-202ENST00000244303 CALHM3Q86XJ0 350 aa14.02□□□□□ -0.16
HIF3A-202ENST00000244303 ZC3H7AQ8IWR0 971 aaKnown RBP14.02□□□□□ -0.16
HIF3A-202ENST00000244303 ADHFE1Q8IWW8 467 aa14.02□□□□□ -0.16
HIF3A-202ENST00000244303 EID3Q8N140 333 aa14.02□□□□□ -0.16
HIF3A-202ENST00000244303 BPIFB6Q8NFQ5 453 aa14.02□□□□□ -0.16
HIF3A-202ENST00000244303 OR10Q1Q8NGQ4 319 aa14.02□□□□□ -0.16
HIF3A-202ENST00000244303 TANKQ92844 425 aa14.02□□□□□ -0.16
HIF3A-202ENST00000244303 TSSK3Q96PN8 268 aa14.02□□□□□ -0.16
HIF3A-202ENST00000244303 KCNH6Q9H252 994 aa14.02□□□□□ -0.16
HIF3A-202ENST00000244303 RC3H2Q9HBD1 1191 aaKnown RBP14.02□□□□□ -0.16
HIF3A-202ENST00000244303 U3KQV3 271 aa14.02□□□□□ -0.16
HIF3A-202ENST00000244303 MYOFQ9NZM1 2061 aa14.02□□□□□ -0.17
HIF3A-202ENST00000244303 BNIP3LO60238 219 aa14.02□□□□□ -0.17
HIF3A-202ENST00000244303 E2F6O75461 281 aa14.02□□□□□ -0.17
HIF3A-202ENST00000244303 TFPTP0C1Z6 253 aa14.02□□□□□ -0.17
HIF3A-202ENST00000244303 CBSLP0DN79 551 aa14.02□□□□□ -0.17
HIF3A-202ENST00000244303 MYCLP1P12525 358 aaPredicted RBP14.02□□□□□ -0.17
HIF3A-202ENST00000244303 LAG3P18627 525 aa14.02□□□□□ -0.17
HIF3A-202ENST00000244303 TACR1P25103 407 aa14.02□□□□□ -0.17
HIF3A-202ENST00000244303 CD70P32970 193 aa14.02□□□□□ -0.17
HIF3A-202ENST00000244303 S100A3P33764 101 aa14.02□□□□□ -0.17
HIF3A-202ENST00000244303 CBSP35520 551 aa14.02□□□□□ -0.17
HIF3A-202ENST00000244303 DCTP40126 519 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms