RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 POLR2EP19388 210 aaKnown RBP15.76■□□□□ 0.11
UBE3D-201ENST00000237186 RPS9P46781 194 aaKnown RBP15.76■□□□□ 0.11
UBE3D-201ENST00000237186 FAM98BQ52LJ0 330 aaKnown RBP15.76■□□□□ 0.11
UBE3D-201ENST00000237186 LY6G5CQ5SRR4 150 aa15.76■□□□□ 0.11
UBE3D-201ENST00000237186 HENMT1Q5T8I9 393 aaKnown RBP15.76■□□□□ 0.11
UBE3D-201ENST00000237186 ATG9BQ674R7 924 aa15.76■□□□□ 0.11
UBE3D-201ENST00000237186 SERPINA13PQ6UXR4 307 aa15.76■□□□□ 0.11
UBE3D-201ENST00000237186 USP51Q70EK9 711 aa15.76■□□□□ 0.11
UBE3D-201ENST00000237186 HSD11B1LQ7Z5J1 315 aa15.76■□□□□ 0.11
UBE3D-201ENST00000237186 TRIML2Q8N7C3 387 aa15.76■□□□□ 0.11
UBE3D-201ENST00000237186 SCAMP4Q969E2 229 aa15.76■□□□□ 0.11
UBE3D-201ENST00000237186 TESCQ96BS2 214 aa15.76■□□□□ 0.11
UBE3D-201ENST00000237186 FCRL1Q96LA6 429 aa15.76■□□□□ 0.11
UBE3D-201ENST00000237186 THUMPD3Q9BV44 507 aaKnown RBP15.76■□□□□ 0.11
UBE3D-201ENST00000237186 ELOVL6Q9H5J4 265 aa15.76■□□□□ 0.11
UBE3D-201ENST00000237186 DNAJC11Q9NVH1 559 aa15.76■□□□□ 0.11
UBE3D-201ENST00000237186 DKK3Q9UBP4 350 aa15.76■□□□□ 0.11
UBE3D-201ENST00000237186 CD84Q9UIB8 345 aa15.76■□□□□ 0.11
UBE3D-201ENST00000237186 FBXO10Q9UK96 956 aa15.76■□□□□ 0.11
UBE3D-201ENST00000237186 ELOVL7A1L3X0 281 aa15.76■□□□□ 0.11
UBE3D-201ENST00000237186 UPK3BL1B0FP48 263 aa15.76■□□□□ 0.11
UBE3D-201ENST00000237186 UPK3BL2E5RIL1 263 aa15.76■□□□□ 0.11
UBE3D-201ENST00000237186 H0YAE9 185 aa15.76■□□□□ 0.11
UBE3D-201ENST00000237186 UGDHO60701 494 aa15.76■□□□□ 0.11
UBE3D-201ENST00000237186 RFPL2O75678 378 aa15.76■□□□□ 0.11
UBE3D-201ENST00000237186 SCELO95171 688 aa15.76■□□□□ 0.11
UBE3D-201ENST00000237186 FTH1P02794 183 aa15.76■□□□□ 0.11
UBE3D-201ENST00000237186 RHOP08100 348 aa15.76■□□□□ 0.11
UBE3D-201ENST00000237186 GNAO1P09471 354 aa15.76■□□□□ 0.11
UBE3D-201ENST00000237186 HOXB9P17482 250 aaPredicted RBP15.76■□□□□ 0.11
UBE3D-201ENST00000237186 HOXB6P17509 224 aaKnown RBP15.76■□□□□ 0.11
UBE3D-201ENST00000237186 MAPK1P28482 360 aa15.76■□□□□ 0.11
UBE3D-201ENST00000237186 HOXA9P31269 272 aa15.76■□□□□ 0.11
UBE3D-201ENST00000237186 CAPGP40121 348 aa15.76■□□□□ 0.11
UBE3D-201ENST00000237186 PHC1P78364 1004 aa15.76■□□□□ 0.11
UBE3D-201ENST00000237186 ADARB1P78563 741 aaKnown RBP15.76■□□□□ 0.11
UBE3D-201ENST00000237186 PCDH1Q08174 1060 aa15.76■□□□□ 0.11
UBE3D-201ENST00000237186 DYNC1I2Q13409 638 aaKnown RBP15.76■□□□□ 0.11
UBE3D-201ENST00000237186 PYCR3Q53H96 274 aa15.76■□□□□ 0.11
UBE3D-201ENST00000237186 CYBRD1Q53TN4 286 aa15.76■□□□□ 0.11
UBE3D-201ENST00000237186 LRRC73Q5JTD7 316 aa15.76■□□□□ 0.11
UBE3D-201ENST00000237186 B3GNT6Q6ZMB0 384 aa15.76■□□□□ 0.11
UBE3D-201ENST00000237186 MSANTD1Q6ZTZ1 278 aa15.76■□□□□ 0.11
UBE3D-201ENST00000237186 DET1Q7L5Y6 550 aa15.76■□□□□ 0.11
UBE3D-201ENST00000237186 PATL1Q86TB9 770 aaKnown RBP15.76■□□□□ 0.11
UBE3D-201ENST00000237186 CALHM3Q86XJ0 350 aa15.76■□□□□ 0.11
UBE3D-201ENST00000237186 DHRSXQ8N5I4 330 aa15.76■□□□□ 0.11
UBE3D-201ENST00000237186 OR10A6Q8NH74 314 aa15.76■□□□□ 0.11
UBE3D-201ENST00000237186 FBXL8Q96CD0 374 aa15.76■□□□□ 0.11
UBE3D-201ENST00000237186 OR52E6Q96RD3 313 aa15.76■□□□□ 0.11
UBE3D-201ENST00000237186 ZSCAN5AQ9BUG6 496 aa15.76■□□□□ 0.11
UBE3D-201ENST00000237186 PAIP1Q9H074 479 aaKnown RBP15.76■□□□□ 0.11
UBE3D-201ENST00000237186 IKZF5Q9H5V7 419 aa15.76■□□□□ 0.11
UBE3D-201ENST00000237186 KAT8Q9H7Z6 458 aaKnown RBP15.76■□□□□ 0.11
UBE3D-201ENST00000237186 SERHLQ9NQF3 203 aa15.76■□□□□ 0.11
UBE3D-201ENST00000237186 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.76■□□□□ 0.11
UBE3D-201ENST00000237186 DLGAP4Q9Y2H0 992 aa15.76■□□□□ 0.11
UBE3D-201ENST00000237186 CEPT1Q9Y6K0 416 aa15.76■□□□□ 0.11
UBE3D-201ENST00000237186 ANKRD12Q6UB98 2062 aa15.75■□□□□ 0.11
UBE3D-201ENST00000237186 A0A096LPI6 279 aa15.75■□□□□ 0.11
UBE3D-201ENST00000237186 PABPN1LA6NDY0 278 aaKnown RBP15.75■□□□□ 0.11
UBE3D-201ENST00000237186 PRAMEF4O60810 478 aa15.75■□□□□ 0.11
UBE3D-201ENST00000237186 LEFTY1O75610 366 aa15.75■□□□□ 0.11
UBE3D-201ENST00000237186 JUPP14923 745 aa15.75■□□□□ 0.11
UBE3D-201ENST00000237186 ETS2P15036 469 aa15.75■□□□□ 0.11
UBE3D-201ENST00000237186 IL1RNP18510 177 aa15.75■□□□□ 0.11
UBE3D-201ENST00000237186 SOX11P35716 441 aa15.75■□□□□ 0.11
UBE3D-201ENST00000237186 NNMTP40261 264 aa15.75■□□□□ 0.11
UBE3D-201ENST00000237186 CHRNB3Q05901 458 aa15.75■□□□□ 0.11
UBE3D-201ENST00000237186 ARSIQ5FYB1 569 aa15.75■□□□□ 0.11
UBE3D-201ENST00000237186 PRAMEF9Q5VWM5 478 aa15.75■□□□□ 0.11
UBE3D-201ENST00000237186 LIPJQ5W064 366 aa15.75■□□□□ 0.11
UBE3D-201ENST00000237186 FRG2Q64ET8 278 aa15.75■□□□□ 0.11
UBE3D-201ENST00000237186 Q6ZVL8 140 aa15.75■□□□□ 0.11
UBE3D-201ENST00000237186 TECPR1Q7Z6L1 1165 aa15.75■□□□□ 0.11
UBE3D-201ENST00000237186 KLHDC8AQ8IYD2 350 aa15.75■□□□□ 0.11
UBE3D-201ENST00000237186 BEND7Q8N7W2 519 aaPredicted RBP15.75■□□□□ 0.11
UBE3D-201ENST00000237186 NMD3Q96D46 503 aaKnown RBP15.75■□□□□ 0.11
UBE3D-201ENST00000237186 MTFMTQ96DP5 389 aaKnown RBP15.75■□□□□ 0.11
UBE3D-201ENST00000237186 FRG2BQ96QU4 278 aa15.75■□□□□ 0.11
UBE3D-201ENST00000237186 YTHDF1Q9BYJ9 559 aaKnown RBP15.75■□□□□ 0.11
UBE3D-201ENST00000237186 PCDH12Q9NPG4 1184 aa15.75■□□□□ 0.11
UBE3D-201ENST00000237186 SLC22A14Q9Y267 594 aa15.75■□□□□ 0.11
UBE3D-201ENST00000237186 FADS3Q9Y5Q0 445 aa15.75■□□□□ 0.11
UBE3D-201ENST00000237186 A0A087WXM4 84 aa15.74■□□□□ 0.11
UBE3D-201ENST00000237186 ZBBXA8MT70 800 aa15.74■□□□□ 0.11
UBE3D-201ENST00000237186 GSTM1P09488 218 aa15.74■□□□□ 0.11
UBE3D-201ENST00000237186 NRIP1P48552 1158 aa15.74■□□□□ 0.11
UBE3D-201ENST00000237186 GZMMP51124 257 aa15.74■□□□□ 0.11
UBE3D-201ENST00000237186 PFN3P60673 137 aa15.74■□□□□ 0.11
UBE3D-201ENST00000237186 PLIN5Q00G26 463 aa15.74■□□□□ 0.11
UBE3D-201ENST00000237186 GSTM4Q03013 218 aa15.74■□□□□ 0.11
UBE3D-201ENST00000237186 DPPA4Q7L190 304 aa15.74■□□□□ 0.11
UBE3D-201ENST00000237186 SP7Q8TDD2 431 aaPredicted RBP15.74■□□□□ 0.11
UBE3D-201ENST00000237186 SKA2Q8WVK7 121 aaPredicted RBP15.74■□□□□ 0.11
UBE3D-201ENST00000237186 ELMO1Q92556 727 aa15.74■□□□□ 0.11
UBE3D-201ENST00000237186 VPS35Q96QK1 796 aa15.74■□□□□ 0.11
UBE3D-201ENST00000237186 RMND5AQ9H871 391 aa15.74■□□□□ 0.11
UBE3D-201ENST00000237186 PCDHGA11Q9Y5H2 935 aa15.74■□□□□ 0.11
UBE3D-201ENST00000237186 TTC34A8MYJ7 566 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms