RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 TDRKHQ9Y2W6 561 aaKnown RBP13.62□□□□□ -0.23
SEC61B-201ENST00000223641 TNPO3Q9Y5L0 923 aaKnown RBP13.62□□□□□ -0.23
SEC61B-201ENST00000223641 COL5A1P20908 1838 aaPredicted RBP13.62□□□□□ -0.23
SEC61B-201ENST00000223641 WDR87Q6ZQQ6 2873 aa13.61□□□□□ -0.23
SEC61B-201ENST00000223641 PCM1Q15154 2024 aa13.61□□□□□ -0.23
SEC61B-201ENST00000223641 LY6G6EA0A0G2JKS1 128 aa13.61□□□□□ -0.23
SEC61B-201ENST00000223641 FAM221BA6H8Z2 402 aa13.61□□□□□ -0.23
SEC61B-201ENST00000223641 PABPN1LA6NDY0 278 aaKnown RBP13.61□□□□□ -0.23
SEC61B-201ENST00000223641 E2F3O00716 465 aa13.61□□□□□ -0.23
SEC61B-201ENST00000223641 KLF11O14901 512 aa13.61□□□□□ -0.23
SEC61B-201ENST00000223641 NUDT21O43809 227 aaKnown RBP13.61□□□□□ -0.23
SEC61B-201ENST00000223641 SIX3O95343 332 aaPredicted RBP13.61□□□□□ -0.23
SEC61B-201ENST00000223641 S100BP04271 92 aaPredicted RBP13.61□□□□□ -0.23
SEC61B-201ENST00000223641 RPS17P08708 135 aaKnown RBP13.61□□□□□ -0.23
SEC61B-201ENST00000223641 PKLRP30613 574 aa13.61□□□□□ -0.23
SEC61B-201ENST00000223641 MDH1P40925 334 aaKnown RBP13.61□□□□□ -0.23
SEC61B-201ENST00000223641 AGTR2P50052 363 aa13.61□□□□□ -0.23
SEC61B-201ENST00000223641 ATXN3P54252 364 aaPredicted RBP13.61□□□□□ -0.23
SEC61B-201ENST00000223641 PNLIPRP1P54315 467 aa13.61□□□□□ -0.23
SEC61B-201ENST00000223641 MAZP56270 477 aaKnown RBP13.61□□□□□ -0.23
SEC61B-201ENST00000223641 NAA20P61599 178 aa13.61□□□□□ -0.23
SEC61B-201ENST00000223641 SLC14A1Q13336 389 aa13.61□□□□□ -0.23
SEC61B-201ENST00000223641 NR1D2Q14995 579 aa13.61□□□□□ -0.23
SEC61B-201ENST00000223641 PDK4Q16654 411 aa13.61□□□□□ -0.23
SEC61B-201ENST00000223641 C18orf21Q32NC0 220 aaPredicted RBP13.61□□□□□ -0.23
SEC61B-201ENST00000223641 PTCHD3Q3KNS1 767 aa13.61□□□□□ -0.23
SEC61B-201ENST00000223641 UNC50Q53HI1 259 aa13.61□□□□□ -0.23
SEC61B-201ENST00000223641 CES4AQ5XG92 561 aa13.61□□□□□ -0.23
SEC61B-201ENST00000223641 ANKS6Q68DC2 871 aa13.61□□□□□ -0.23
SEC61B-201ENST00000223641 ZNF438Q7Z4V0 828 aa13.61□□□□□ -0.23
SEC61B-201ENST00000223641 MTERF4Q7Z6M4 381 aaKnown RBP13.61□□□□□ -0.23
SEC61B-201ENST00000223641 TRIM48Q8IWZ4 208 aa13.61□□□□□ -0.23
SEC61B-201ENST00000223641 LINC01555Q8NAE3 123 aa13.61□□□□□ -0.23
SEC61B-201ENST00000223641 KYQ8NBH2 561 aa13.61□□□□□ -0.23
SEC61B-201ENST00000223641 OR2L8Q8NGY9 312 aa13.61□□□□□ -0.23
SEC61B-201ENST00000223641 RAB3IL1Q8TBN0 382 aa13.61□□□□□ -0.23
SEC61B-201ENST00000223641 CKAP2Q8WWK9 683 aa13.61□□□□□ -0.23
SEC61B-201ENST00000223641 SH3KBP1Q96B97 665 aa13.61□□□□□ -0.23
SEC61B-201ENST00000223641 NRTNQ99748 197 aa13.61□□□□□ -0.23
SEC61B-201ENST00000223641 PAIP2Q9BPZ3 127 aaKnown RBP13.61□□□□□ -0.23
SEC61B-201ENST00000223641 GATA5Q9BWX5 397 aaPredicted RBP13.61□□□□□ -0.23
SEC61B-201ENST00000223641 SGPP1Q9BX95 441 aa13.61□□□□□ -0.23
SEC61B-201ENST00000223641 CCDC134Q9H6E4 229 aa13.61□□□□□ -0.23
SEC61B-201ENST00000223641 INTS7Q9NVH2 962 aaKnown RBP13.61□□□□□ -0.23
SEC61B-201ENST00000223641 OR6C2Q9NZP2 312 aa13.61□□□□□ -0.23
SEC61B-201ENST00000223641 OGFRQ9NZT2 677 aa13.61□□□□□ -0.23
SEC61B-201ENST00000223641 NCDNQ9UBB6 729 aa13.61□□□□□ -0.23
SEC61B-201ENST00000223641 CIDEBQ9UHD4 219 aa13.61□□□□□ -0.23
SEC61B-201ENST00000223641 ASB1Q9Y576 335 aa13.61□□□□□ -0.23
SEC61B-201ENST00000223641 U3KQA8 63 aa13.61□□□□□ -0.23
SEC61B-201ENST00000223641 A0A1W2PPV9 198 aa13.6□□□□□ -0.23
SEC61B-201ENST00000223641 WDR91A4D1P6 747 aa13.6□□□□□ -0.23
SEC61B-201ENST00000223641 LRRC14BA6NHZ5 514 aa13.6□□□□□ -0.23
SEC61B-201ENST00000223641 LILRA5A6NI73 299 aa13.6□□□□□ -0.23
SEC61B-201ENST00000223641 ZNF839A8K0R7 811 aa13.6□□□□□ -0.23
SEC61B-201ENST00000223641 SIGLEC6O43699 453 aa13.6□□□□□ -0.23
SEC61B-201ENST00000223641 PRICKLE3O43900 615 aaPredicted RBP13.6□□□□□ -0.23
SEC61B-201ENST00000223641 FOXD2O60548 495 aaPredicted RBP13.6□□□□□ -0.23
SEC61B-201ENST00000223641 STK16O75716 305 aa13.6□□□□□ -0.23
SEC61B-201ENST00000223641 GLB1P16278 677 aa13.6□□□□□ -0.23
SEC61B-201ENST00000223641 SHMT2P34897 504 aa13.6□□□□□ -0.23
SEC61B-201ENST00000223641 HSPA7P48741 367 aa13.6□□□□□ -0.23
SEC61B-201ENST00000223641 NAGLUP54802 743 aa13.6□□□□□ -0.23
SEC61B-201ENST00000223641 ASPHQ12797 758 aa13.6□□□□□ -0.23
SEC61B-201ENST00000223641 FASTKQ14296 549 aaKnown RBP13.6□□□□□ -0.23
SEC61B-201ENST00000223641 SUZ12Q15022 739 aaKnown RBP13.6□□□□□ -0.23
SEC61B-201ENST00000223641 RGS9BPQ6ZS82 235 aa13.6□□□□□ -0.23
SEC61B-201ENST00000223641 RAB44Q7Z6P3 723 aaPredicted RBP13.6□□□□□ -0.23
SEC61B-201ENST00000223641 RAB42Q8N4Z0 105 aa13.6□□□□□ -0.23
SEC61B-201ENST00000223641 OR6C4Q8NGE1 309 aa13.6□□□□□ -0.23
SEC61B-201ENST00000223641 ESAMQ96AP7 390 aa13.6□□□□□ -0.23
SEC61B-201ENST00000223641 APOLD1Q96LR9 279 aa13.6□□□□□ -0.23
SEC61B-201ENST00000223641 MAGEB18Q96M61 343 aa13.6□□□□□ -0.23
SEC61B-201ENST00000223641 IL17FQ96PD4 163 aa13.6□□□□□ -0.23
SEC61B-201ENST00000223641 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.6□□□□□ -0.23
SEC61B-201ENST00000223641 ATG10Q9H0Y0 220 aa13.6□□□□□ -0.23
SEC61B-201ENST00000223641 GSTO2Q9H4Y5 243 aa13.6□□□□□ -0.23
SEC61B-201ENST00000223641 SLC32A1Q9H598 525 aa13.6□□□□□ -0.23
SEC61B-201ENST00000223641 STN1Q9H668 368 aaKnown RBP13.6□□□□□ -0.23
SEC61B-201ENST00000223641 RXFP3Q9NSD7 469 aa13.6□□□□□ -0.23
SEC61B-201ENST00000223641 WWOXQ9NZC7 414 aa13.6□□□□□ -0.23
SEC61B-201ENST00000223641 PCTPQ9UKL6 214 aa13.6□□□□□ -0.23
SEC61B-201ENST00000223641 PLAGL1Q9UM63 463 aa13.6□□□□□ -0.23
SEC61B-201ENST00000223641 EME2A4GXA9 379 aaPredicted RBP13.59□□□□□ -0.23
SEC61B-201ENST00000223641 K7EPI3 171 aa13.59□□□□□ -0.23
SEC61B-201ENST00000223641 NPHS1O60500 1241 aa13.59□□□□□ -0.23
SEC61B-201ENST00000223641 H2AFYO75367 372 aaKnown RBP13.59□□□□□ -0.23
SEC61B-201ENST00000223641 PNLIPP16233 465 aa13.59□□□□□ -0.23
SEC61B-201ENST00000223641 BGNP21810 368 aa13.59□□□□□ -0.23
SEC61B-201ENST00000223641 CCND1P24385 295 aa13.59□□□□□ -0.23
SEC61B-201ENST00000223641 GRK2P25098 689 aa13.59□□□□□ -0.23
SEC61B-201ENST00000223641 EEF1DP29692 281 aaKnown RBP13.59□□□□□ -0.23
SEC61B-201ENST00000223641 SERPINB5P36952 375 aa13.59□□□□□ -0.23
SEC61B-201ENST00000223641 GDF5P43026 501 aa13.59□□□□□ -0.23
SEC61B-201ENST00000223641 PCDH1Q08174 1060 aa13.59□□□□□ -0.23
SEC61B-201ENST00000223641 GALNT1Q10472 559 aaPredicted RBP13.59□□□□□ -0.23
SEC61B-201ENST00000223641 NAE1Q13564 534 aa13.59□□□□□ -0.23
SEC61B-201ENST00000223641 CHI3L2Q15782 390 aa13.59□□□□□ -0.23
SEC61B-201ENST00000223641 PROX2Q3B8N5 592 aa13.59□□□□□ -0.23
SEC61B-201ENST00000223641 FBXO48Q5FWF7 155 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms