RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 YARS2Q9Y2Z4 477 aaKnown RBP10.24□□□□□ -0.77
VCL-201ENST00000211998 FKTNO75072 461 aa10.24□□□□□ -0.77
VCL-201ENST00000211998 FSHRP23945 695 aa10.24□□□□□ -0.77
VCL-201ENST00000211998 FRRS1Q6ZNA5 592 aa10.24□□□□□ -0.77
VCL-201ENST00000211998 GPALPP1Q8IXQ4 340 aa10.24□□□□□ -0.77
VCL-201ENST00000211998 PPTC7Q8NI37 304 aa10.24□□□□□ -0.77
VCL-201ENST00000211998 GAB3Q8WWW8 586 aa10.24□□□□□ -0.77
VCL-201ENST00000211998 HYLS1Q96M11 299 aa10.24□□□□□ -0.77
VCL-201ENST00000211998 IPPKQ9H8X2 491 aa10.24□□□□□ -0.77
VCL-201ENST00000211998 RCOR3Q9P2K3 495 aaPredicted RBP10.24□□□□□ -0.77
VCL-201ENST00000211998 IKZF2Q9UKS7 526 aa10.24□□□□□ -0.77
VCL-201ENST00000211998 TCRBV7S3A2A0A539 114 aa10.24□□□□□ -0.77
VCL-201ENST00000211998 H3BMQ9 156 aa10.24□□□□□ -0.77
VCL-201ENST00000211998 NUPL2O15504 423 aaKnown RBP10.24□□□□□ -0.77
VCL-201ENST00000211998 CHRNB2P17787 502 aa10.24□□□□□ -0.77
VCL-201ENST00000211998 PFKPQ01813 784 aa10.24□□□□□ -0.77
VCL-201ENST00000211998 ALG11Q2TAA5 492 aa10.24□□□□□ -0.77
VCL-201ENST00000211998 ZDHHC20Q5W0Z9 365 aa10.24□□□□□ -0.77
VCL-201ENST00000211998 SERPINA13PQ6UXR4 307 aa10.24□□□□□ -0.77
VCL-201ENST00000211998 OTOP3Q7RTS5 596 aa10.24□□□□□ -0.77
VCL-201ENST00000211998 OR10H4Q8NGA5 316 aa10.24□□□□□ -0.77
VCL-201ENST00000211998 OR6C4Q8NGE1 309 aa10.24□□□□□ -0.77
VCL-201ENST00000211998 OR10T2Q8NGX3 314 aa10.24□□□□□ -0.77
VCL-201ENST00000211998 CD300LFQ8TDQ1 290 aa10.24□□□□□ -0.77
VCL-201ENST00000211998 MFSD14AQ96MC6 490 aa10.24□□□□□ -0.77
VCL-201ENST00000211998 COG8Q96MW5 612 aa10.24□□□□□ -0.77
VCL-201ENST00000211998 OXCT2Q9BYC2 517 aaPredicted RBP10.24□□□□□ -0.77
VCL-201ENST00000211998 MFSD1Q9H3U5 465 aa10.24□□□□□ -0.77
VCL-201ENST00000211998 RPH3AQ9Y2J0 694 aaPredicted RBP10.24□□□□□ -0.77
VCL-201ENST00000211998 IFT52Q9Y366 437 aa10.24□□□□□ -0.77
VCL-201ENST00000211998 SMIM35A0A1B0GVV1 85 aa10.24□□□□□ -0.77
VCL-201ENST00000211998 TMEM233B4DJY2 109 aa10.24□□□□□ -0.77
VCL-201ENST00000211998 AP2A1O95782 977 aa10.24□□□□□ -0.77
VCL-201ENST00000211998 SPATA31C1P0DKV0 1188 aa10.24□□□□□ -0.77
VCL-201ENST00000211998 AMD1P17707 334 aa10.24□□□□□ -0.77
VCL-201ENST00000211998 LPOP22079 712 aaPredicted RBP10.24□□□□□ -0.77
VCL-201ENST00000211998 HTR1BP28222 390 aa10.24□□□□□ -0.77
VCL-201ENST00000211998 NMBRP28336 390 aa10.24□□□□□ -0.77
VCL-201ENST00000211998 ECHS1P30084 290 aa10.24□□□□□ -0.77
VCL-201ENST00000211998 CBX5P45973 191 aa10.24□□□□□ -0.77
VCL-201ENST00000211998 MANFP55145 182 aaKnown RBP10.24□□□□□ -0.77
VCL-201ENST00000211998 HNRNPA0Q13151 305 aaKnown RBP10.24□□□□□ -0.77
VCL-201ENST00000211998 NOGQ13253 232 aa10.24□□□□□ -0.77
VCL-201ENST00000211998 PTGES3Q15185 160 aaKnown RBP10.24□□□□□ -0.77
VCL-201ENST00000211998 C6orf141Q5SZD1 244 aa10.24□□□□□ -0.77
VCL-201ENST00000211998 UGT2A3Q6UWM9 527 aa10.24□□□□□ -0.77
VCL-201ENST00000211998 BEND5Q7L4P6 421 aa10.24□□□□□ -0.77
VCL-201ENST00000211998 LDB1Q86U70 411 aaPredicted RBP10.24□□□□□ -0.77
VCL-201ENST00000211998 CRYBG2Q8N1P7 616 aa10.24□□□□□ -0.77
VCL-201ENST00000211998 OR8K3Q8NH51 312 aa10.24□□□□□ -0.77
VCL-201ENST00000211998 TSEN15Q8WW01 171 aaKnown RBP10.24□□□□□ -0.77
VCL-201ENST00000211998 UQCC2Q9BRT2 126 aa10.24□□□□□ -0.77
VCL-201ENST00000211998 HTATIP2Q9BUP3 242 aa10.24□□□□□ -0.77
VCL-201ENST00000211998 ZNF471Q9BX82 626 aaPredicted RBP10.24□□□□□ -0.77
VCL-201ENST00000211998 SMURF1Q9HCE7 757 aa10.24□□□□□ -0.77
VCL-201ENST00000211998 DISP2A7MBM2 1401 aa10.24□□□□□ -0.77
VCL-201ENST00000211998 KIF1AQ12756 1690 aa10.24□□□□□ -0.77
VCL-201ENST00000211998 MAGEB17A8MXT2 336 aa10.23□□□□□ -0.77
VCL-201ENST00000211998 B8ZZF3 427 aa10.23□□□□□ -0.77
VCL-201ENST00000211998 MFSD11O43934 449 aa10.23□□□□□ -0.77
VCL-201ENST00000211998 B3GALNT1O75752 331 aa10.23□□□□□ -0.77
VCL-201ENST00000211998 NDST2P52849 883 aa10.23□□□□□ -0.77
VCL-201ENST00000211998 OR2T5Q6IEZ7 315 aa10.23□□□□□ -0.77
VCL-201ENST00000211998 GALNT7Q86SF2 657 aa10.23□□□□□ -0.77
VCL-201ENST00000211998 OR2T29Q8NH02 315 aa10.23□□□□□ -0.77
VCL-201ENST00000211998 C1orf216Q8TAB5 229 aa10.23□□□□□ -0.77
VCL-201ENST00000211998 KLHL6Q8WZ60 621 aa10.23□□□□□ -0.77
VCL-201ENST00000211998 HSD17B14Q9BPX1 270 aa10.23□□□□□ -0.77
VCL-201ENST00000211998 ANKMY1Q9P2S6 941 aa10.23□□□□□ -0.77
VCL-201ENST00000211998 ERVK-18Q9QC07 812 aa10.23□□□□□ -0.77
VCL-201ENST00000211998 RIC1Q4ADV7 1423 aa10.23□□□□□ -0.77
VCL-201ENST00000211998 ATRNO75882 1429 aa10.23□□□□□ -0.77
VCL-201ENST00000211998 ABHD14A-ACY1A0A1B0GW23 586 aa10.23□□□□□ -0.77
VCL-201ENST00000211998 TYROBPO43914 113 aa10.23□□□□□ -0.77
VCL-201ENST00000211998 ENTPD6O75354 484 aa10.23□□□□□ -0.77
VCL-201ENST00000211998 RLN2P04090 185 aa10.23□□□□□ -0.77
VCL-201ENST00000211998 TEX44Q53QW1 395 aa10.23□□□□□ -0.77
VCL-201ENST00000211998 FAM122CQ6P4D5 195 aa10.23□□□□□ -0.77
VCL-201ENST00000211998 XYLT1Q86Y38 959 aa10.23□□□□□ -0.77
VCL-201ENST00000211998 SNX29P2Q8IUI4 249 aa10.23□□□□□ -0.77
VCL-201ENST00000211998 METTL25Q8N6Q8 603 aa10.23□□□□□ -0.77
VCL-201ENST00000211998 CNIH3Q8TBE1 160 aa10.23□□□□□ -0.77
VCL-201ENST00000211998 TCEAL3Q969E4 200 aa10.23□□□□□ -0.77
VCL-201ENST00000211998 TMED9Q9BVK6 235 aa10.23□□□□□ -0.77
VCL-201ENST00000211998 ASPNQ9BXN1 380 aa10.23□□□□□ -0.77
VCL-201ENST00000211998 AKTIPQ9H8T0 292 aa10.23□□□□□ -0.77
VCL-201ENST00000211998 ZNF705EA8MWA4 302 aaPredicted RBP10.23□□□□□ -0.77
VCL-201ENST00000211998 RASAL1O95294 804 aa10.23□□□□□ -0.77
VCL-201ENST00000211998 RYKP34925 604 aa10.23□□□□□ -0.77
VCL-201ENST00000211998 BMXP51813 675 aa10.23□□□□□ -0.77
VCL-201ENST00000211998 CBFBQ13951 182 aa10.23□□□□□ -0.77
VCL-201ENST00000211998 MBLAC2Q68D91 279 aa10.23□□□□□ -0.77
VCL-201ENST00000211998 NOXA1Q86UR1 476 aa10.23□□□□□ -0.77
VCL-201ENST00000211998 MON1AQ86VX9 555 aa10.23□□□□□ -0.77
VCL-201ENST00000211998 ZSCAN1Q8NBB4 408 aa10.23□□□□□ -0.77
VCL-201ENST00000211998 SPPL2BQ8TCT7 592 aa10.23□□□□□ -0.77
VCL-201ENST00000211998 C7orf43Q8WVR3 580 aa10.23□□□□□ -0.77
VCL-201ENST00000211998 PMEPA1Q969W9 287 aa10.23□□□□□ -0.77
VCL-201ENST00000211998 ZUFSPQ96AP4 578 aa10.23□□□□□ -0.77
VCL-201ENST00000211998 RSPH9Q9H1X1 276 aaPredicted RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms