RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 ACPPP15309 386 aa14.72□□□□□ -0.05
EFNB1-201ENST00000204961 ALDH3A2P51648 485 aa14.72□□□□□ -0.05
EFNB1-201ENST00000204961 RPL26P61254 145 aaKnown RBP14.72□□□□□ -0.05
EFNB1-201ENST00000204961 PWP1Q13610 501 aa14.72□□□□□ -0.05
EFNB1-201ENST00000204961 PTCHD3Q3KNS1 767 aa14.72□□□□□ -0.05
EFNB1-201ENST00000204961 CLIP4Q8N3C7 705 aa14.72□□□□□ -0.05
EFNB1-201ENST00000204961 NDNFQ8TB73 568 aa14.72□□□□□ -0.05
EFNB1-201ENST00000204961 UHRF1Q96T88 793 aaPredicted RBP14.72□□□□□ -0.05
EFNB1-201ENST00000204961 MARCH7Q9H992 704 aa14.72□□□□□ -0.05
EFNB1-201ENST00000204961 PDP1Q9P0J1 537 aaPredicted RBP14.72□□□□□ -0.05
EFNB1-201ENST00000204961 TRIM17Q9Y577 477 aa14.72□□□□□ -0.05
EFNB1-201ENST00000204961 ORC6Q9Y5N6 252 aa14.72□□□□□ -0.05
EFNB1-201ENST00000204961 NPIPB15A6NHN6 443 aaPredicted RBP14.72□□□□□ -0.05
EFNB1-201ENST00000204961 H3BNC9 293 aa14.72□□□□□ -0.05
EFNB1-201ENST00000204961 NADKO95544 446 aaPredicted RBP14.72□□□□□ -0.05
EFNB1-201ENST00000204961 ALPLP05186 524 aa14.72□□□□□ -0.05
EFNB1-201ENST00000204961 HTR1BP28222 390 aa14.72□□□□□ -0.05
EFNB1-201ENST00000204961 CD70P32970 193 aa14.72□□□□□ -0.05
EFNB1-201ENST00000204961 PREPP48147 710 aa14.72□□□□□ -0.05
EFNB1-201ENST00000204961 PSMD8P48556 350 aa14.72□□□□□ -0.05
EFNB1-201ENST00000204961 TRIM16LQ309B1 348 aa14.72□□□□□ -0.05
EFNB1-201ENST00000204961 XKR7Q5GH72 579 aa14.72□□□□□ -0.05
EFNB1-201ENST00000204961 HACD2Q6Y1H2 254 aa14.72□□□□□ -0.05
EFNB1-201ENST00000204961 Q6ZNX1 250 aa14.72□□□□□ -0.05
EFNB1-201ENST00000204961 SPRED1Q7Z699 444 aa14.72□□□□□ -0.05
EFNB1-201ENST00000204961 MSRB3Q8IXL7 192 aa14.72□□□□□ -0.05
EFNB1-201ENST00000204961 TTC30BQ8N4P2 665 aa14.72□□□□□ -0.05
EFNB1-201ENST00000204961 MFSD2AQ8NA29 543 aa14.72□□□□□ -0.05
EFNB1-201ENST00000204961 ZNF540Q8NDQ6 660 aa14.72□□□□□ -0.05
EFNB1-201ENST00000204961 OR5AK3PQ8NH89 298 aa14.72□□□□□ -0.05
EFNB1-201ENST00000204961 SPPL2AQ8TCT8 520 aa14.72□□□□□ -0.05
EFNB1-201ENST00000204961 HTRA1Q92743 480 aa14.72□□□□□ -0.05
EFNB1-201ENST00000204961 ANKRD36A6QL64 1941 aa14.72□□□□□ -0.05
EFNB1-201ENST00000204961 ZSWIM8A7E2V4 1837 aa14.72□□□□□ -0.05
EFNB1-201ENST00000204961 FUOMA2VDF0 154 aa14.72□□□□□ -0.05
EFNB1-201ENST00000204961 UPK1AO00322 258 aa14.72□□□□□ -0.05
EFNB1-201ENST00000204961 SCAMP1O15126 338 aa14.72□□□□□ -0.05
EFNB1-201ENST00000204961 STATHP02808 62 aa14.72□□□□□ -0.05
EFNB1-201ENST00000204961 PTGER1P34995 402 aa14.72□□□□□ -0.05
EFNB1-201ENST00000204961 PTGER3P43115 390 aa14.72□□□□□ -0.05
EFNB1-201ENST00000204961 CD97P48960 835 aa14.72□□□□□ -0.05
EFNB1-201ENST00000204961 EEFSECP57772 596 aaKnown RBP14.72□□□□□ -0.05
EFNB1-201ENST00000204961 ADAMTSL2Q86TH1 951 aa14.72□□□□□ -0.05
EFNB1-201ENST00000204961 ZDHHC21Q8IVQ6 265 aa14.72□□□□□ -0.05
EFNB1-201ENST00000204961 SPARTQ8N0X7 666 aa14.72□□□□□ -0.05
EFNB1-201ENST00000204961 ZBTB2Q8N680 514 aa14.72□□□□□ -0.05
EFNB1-201ENST00000204961 UTP15Q8TED0 518 aaKnown RBP14.72□□□□□ -0.05
EFNB1-201ENST00000204961 ALOXE3Q9BYJ1 711 aa14.72□□□□□ -0.05
EFNB1-201ENST00000204961 RAD21L1Q9H4I0 556 aa14.72□□□□□ -0.05
EFNB1-201ENST00000204961 DHRS7Q9Y394 339 aa14.72□□□□□ -0.05
EFNB1-201ENST00000204961 RALGAPA2Q2PPJ7 1873 aa14.72□□□□□ -0.05
EFNB1-201ENST00000204961 LOC100130705A0A1B0GUX0 176 aa14.71□□□□□ -0.05
EFNB1-201ENST00000204961 CFAP99D6REC4 459 aa14.71□□□□□ -0.05
EFNB1-201ENST00000204961 ANGPTL1O95841 491 aa14.71□□□□□ -0.05
EFNB1-201ENST00000204961 ATP4BP51164 291 aa14.71□□□□□ -0.05
EFNB1-201ENST00000204961 NFATC2Q13469 925 aa14.71□□□□□ -0.05
EFNB1-201ENST00000204961 CARD16Q5EG05 197 aa14.71□□□□□ -0.05
EFNB1-201ENST00000204961 C6orf141Q5SZD1 244 aa14.71□□□□□ -0.05
EFNB1-201ENST00000204961 DNAJB7Q7Z6W7 309 aaPredicted RBP14.71□□□□□ -0.05
EFNB1-201ENST00000204961 CCDC117Q8IWD4 279 aaPredicted RBP14.71□□□□□ -0.05
EFNB1-201ENST00000204961 NLGN4XQ8N0W4 816 aa14.71□□□□□ -0.05
EFNB1-201ENST00000204961 GPR150Q8NGU9 434 aa14.71□□□□□ -0.05
EFNB1-201ENST00000204961 KCNJ9Q92806 393 aa14.71□□□□□ -0.05
EFNB1-201ENST00000204961 KCNC2Q96PR1 638 aa14.71□□□□□ -0.05
EFNB1-201ENST00000204961 ZNF382Q96SR6 550 aa14.71□□□□□ -0.05
EFNB1-201ENST00000204961 HERC2P3Q9BVR0 1158 aa14.71□□□□□ -0.05
EFNB1-201ENST00000204961 ACPTQ9BZG2 426 aa14.71□□□□□ -0.05
EFNB1-201ENST00000204961 ABCB10Q9NRK6 738 aa14.71□□□□□ -0.05
EFNB1-201ENST00000204961 PAK1IP1Q9NWT1 392 aaPredicted RBP14.71□□□□□ -0.05
EFNB1-201ENST00000204961 RHCGQ9UBD6 479 aa14.71□□□□□ -0.05
EFNB1-201ENST00000204961 MAGEL2Q9UJ55 1249 aa14.71□□□□□ -0.05
EFNB1-201ENST00000204961 TESMINQ9Y4I5 508 aa14.71□□□□□ -0.05
EFNB1-201ENST00000204961 AREL1O15033 823 aa14.71□□□□□ -0.05
EFNB1-201ENST00000204961 ESR1P03372 595 aa14.71□□□□□ -0.05
EFNB1-201ENST00000204961 JAK1P23458 1154 aa14.71□□□□□ -0.05
EFNB1-201ENST00000204961 CACNG1Q06432 222 aa14.71□□□□□ -0.05
EFNB1-201ENST00000204961 CCSMST1Q4G0I0 132 aa14.71□□□□□ -0.05
EFNB1-201ENST00000204961 LRRC66Q68CR7 880 aa14.71□□□□□ -0.05
EFNB1-201ENST00000204961 BBS7Q8IWZ6 715 aa14.71□□□□□ -0.05
EFNB1-201ENST00000204961 EID3Q8N140 333 aa14.71□□□□□ -0.05
EFNB1-201ENST00000204961 OR4K1Q8NGD4 311 aa14.71□□□□□ -0.05
EFNB1-201ENST00000204961 NRBF2Q96F24 287 aa14.71□□□□□ -0.05
EFNB1-201ENST00000204961 CFAP97Q9P2B7 532 aa14.71□□□□□ -0.05
EFNB1-201ENST00000204961 SAMHD1Q9Y3Z3 626 aaKnown RBP14.71□□□□□ -0.05
EFNB1-201ENST00000204961 WDR87Q6ZQQ6 2873 aa14.71□□□□□ -0.06
EFNB1-201ENST00000204961 TYW5A2RUC4 315 aaKnown RBP14.71□□□□□ -0.06
EFNB1-201ENST00000204961 RFXAPO00287 272 aa14.71□□□□□ -0.06
EFNB1-201ENST00000204961 BCKDKO14874 412 aa14.71□□□□□ -0.06
EFNB1-201ENST00000204961 VPS4BO75351 444 aa14.71□□□□□ -0.06
EFNB1-201ENST00000204961 BCAS1O75363 584 aaPredicted RBP14.71□□□□□ -0.06
EFNB1-201ENST00000204961 EPOP01588 193 aa14.71□□□□□ -0.06
EFNB1-201ENST00000204961 LCKP06239 509 aa14.71□□□□□ -0.06
EFNB1-201ENST00000204961 GGT1P19440 569 aa14.71□□□□□ -0.06
EFNB1-201ENST00000204961 GABRR2P28476 465 aa14.71□□□□□ -0.06
EFNB1-201ENST00000204961 SLC26A3P40879 764 aa14.71□□□□□ -0.06
EFNB1-201ENST00000204961 LRRC74AQ0VAA2 488 aa14.71□□□□□ -0.06
EFNB1-201ENST00000204961 HORMAD1Q86X24 394 aa14.71□□□□□ -0.06
EFNB1-201ENST00000204961 SYT12Q8IV01 421 aa14.71□□□□□ -0.06
EFNB1-201ENST00000204961 PSMA8Q8TAA3 256 aa14.71□□□□□ -0.06
EFNB1-201ENST00000204961 NODALQ96S42 347 aa14.71□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms