RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 HCFC2Q9Y5Z7 792 aa12.83□□□□□ -0.36
CTNS-201ENST00000046640 OR2AG2A6NM03 316 aa12.82□□□□□ -0.36
CTNS-201ENST00000046640 H0Y858 1186 aa12.82□□□□□ -0.36
CTNS-201ENST00000046640 GSTA4O15217 222 aa12.82□□□□□ -0.36
CTNS-201ENST00000046640 LAG3P18627 525 aa12.82□□□□□ -0.36
CTNS-201ENST00000046640 AGXTP21549 392 aa12.82□□□□□ -0.36
CTNS-201ENST00000046640 CD9P21926 228 aa12.82□□□□□ -0.36
CTNS-201ENST00000046640 MNX1P50219 401 aaPredicted RBP12.82□□□□□ -0.36
CTNS-201ENST00000046640 ARSFP54793 590 aa12.82□□□□□ -0.36
CTNS-201ENST00000046640 WDR5P61964 334 aaKnown RBP12.82□□□□□ -0.36
CTNS-201ENST00000046640 SNRPD1P62314 119 aaKnown RBP12.82□□□□□ -0.36
CTNS-201ENST00000046640 CBX2Q14781 532 aaPredicted RBP12.82□□□□□ -0.36
CTNS-201ENST00000046640 ZNF829Q3KNS6 432 aaPredicted RBP12.82□□□□□ -0.36
CTNS-201ENST00000046640 PERM1Q5SV97 790 aa12.82□□□□□ -0.36
CTNS-201ENST00000046640 ZNF697Q5TEC3 545 aa12.82□□□□□ -0.36
CTNS-201ENST00000046640 SUSD1Q6UWL2 747 aa12.82□□□□□ -0.36
CTNS-201ENST00000046640 TMC8Q8IU68 726 aa12.82□□□□□ -0.36
CTNS-201ENST00000046640 VOPP1Q96AW1 172 aa12.82□□□□□ -0.36
CTNS-201ENST00000046640 CSF3RQ99062 836 aa12.82□□□□□ -0.36
CTNS-201ENST00000046640 BBS2Q9BXC9 721 aa12.82□□□□□ -0.36
CTNS-201ENST00000046640 LRRC3Q9BY71 257 aa12.82□□□□□ -0.36
CTNS-201ENST00000046640 TOR3AQ9H497 397 aa12.82□□□□□ -0.36
CTNS-201ENST00000046640 BRD9Q9H8M2 597 aa12.82□□□□□ -0.36
CTNS-201ENST00000046640 CARS2Q9HA77 564 aaKnown RBP12.82□□□□□ -0.36
CTNS-201ENST00000046640 PCDH12Q9NPG4 1184 aa12.82□□□□□ -0.36
CTNS-201ENST00000046640 SLC6A13Q9NSD5 602 aa12.82□□□□□ -0.36
CTNS-201ENST00000046640 B4GALT6Q9UBX8 382 aa12.82□□□□□ -0.36
CTNS-201ENST00000046640 PCDHGA11Q9Y5H2 935 aa12.82□□□□□ -0.36
CTNS-201ENST00000046640 ANKRD28O15084 1053 aa12.82□□□□□ -0.36
CTNS-201ENST00000046640 STK16O75716 305 aa12.82□□□□□ -0.36
CTNS-201ENST00000046640 GLUD1P00367 558 aa12.82□□□□□ -0.36
CTNS-201ENST00000046640 LAPTM4AQ15012 233 aa12.82□□□□□ -0.36
CTNS-201ENST00000046640 EGFLAMQ63HQ2 1017 aa12.82□□□□□ -0.36
CTNS-201ENST00000046640 C22orf39Q6P5X5 142 aa12.82□□□□□ -0.36
CTNS-201ENST00000046640 DCDC5Q6ZRR9 648 aa12.82□□□□□ -0.36
CTNS-201ENST00000046640 UBE2R2Q712K3 238 aaPredicted RBP12.82□□□□□ -0.36
CTNS-201ENST00000046640 KREMEN2Q8NCW0 462 aa12.82□□□□□ -0.36
CTNS-201ENST00000046640 PPP1R14BQ96C90 147 aa12.82□□□□□ -0.36
CTNS-201ENST00000046640 SCRN2Q96FV2 425 aa12.82□□□□□ -0.36
CTNS-201ENST00000046640 TSSK3Q96PN8 268 aa12.82□□□□□ -0.36
CTNS-201ENST00000046640 HTATIP2Q9BUP3 242 aa12.82□□□□□ -0.36
CTNS-201ENST00000046640 DPY30Q9C005 99 aa12.82□□□□□ -0.36
CTNS-201ENST00000046640 CD320Q9NPF0 282 aa12.82□□□□□ -0.36
CTNS-201ENST00000046640 LIMD1Q9UGP4 676 aa12.82□□□□□ -0.36
CTNS-201ENST00000046640 TBX21Q9UL17 535 aa12.82□□□□□ -0.36
CTNS-201ENST00000046640 PDE10AQ9Y233 779 aa12.82□□□□□ -0.36
CTNS-201ENST00000046640 CCL27Q9Y4X3 112 aa12.82□□□□□ -0.36
CTNS-201ENST00000046640 XIRP2A4UGR9 3374 aa12.81□□□□□ -0.36
CTNS-201ENST00000046640 HIDE1A8MVS5 230 aa12.81□□□□□ -0.36
CTNS-201ENST00000046640 RPS3P23396 243 aaKnown RBP eCLIP12.81□□□□□ -0.36
CTNS-201ENST00000046640 HLCSP50747 726 aa12.81□□□□□ -0.36
CTNS-201ENST00000046640 NTHL1P78549 312 aa12.81□□□□□ -0.36
CTNS-201ENST00000046640 ADARB1P78563 741 aaKnown RBP12.81□□□□□ -0.36
CTNS-201ENST00000046640 ARHGEF6Q15052 776 aa12.81□□□□□ -0.36
CTNS-201ENST00000046640 SF1Q15637 639 aaKnown RBP12.81□□□□□ -0.36
CTNS-201ENST00000046640 AASDHQ4L235 1098 aaPredicted RBP12.81□□□□□ -0.36
CTNS-201ENST00000046640 TPRG1Q6ZUI0 275 aa12.81□□□□□ -0.36
CTNS-201ENST00000046640 OSCP1Q8WVF1 389 aa12.81□□□□□ -0.36
CTNS-201ENST00000046640 CFHR5Q9BXR6 569 aa12.81□□□□□ -0.36
CTNS-201ENST00000046640 HEBP1Q9NRV9 189 aa12.81□□□□□ -0.36
CTNS-201ENST00000046640 ST14Q9Y5Y6 855 aa12.81□□□□□ -0.36
CTNS-201ENST00000046640 TMEM221A6NGB7 291 aa12.81□□□□□ -0.36
CTNS-201ENST00000046640 TRIM64CA6NLI5 447 aa12.81□□□□□ -0.36
CTNS-201ENST00000046640 AXIN1O15169 862 aa12.81□□□□□ -0.36
CTNS-201ENST00000046640 RGS14O43566 566 aa12.81□□□□□ -0.36
CTNS-201ENST00000046640 C1QCP02747 245 aa12.81□□□□□ -0.36
CTNS-201ENST00000046640 THRBP10828 461 aa12.81□□□□□ -0.36
CTNS-201ENST00000046640 FSHRP23945 695 aa12.81□□□□□ -0.36
CTNS-201ENST00000046640 PIGAP37287 484 aa12.81□□□□□ -0.36
CTNS-201ENST00000046640 NSG1P42857 185 aa12.81□□□□□ -0.36
CTNS-201ENST00000046640 RXRGP48443 463 aa12.81□□□□□ -0.36
CTNS-201ENST00000046640 FOXM1Q08050 763 aa12.81□□□□□ -0.36
CTNS-201ENST00000046640 MAPKAPK3Q16644 382 aa12.81□□□□□ -0.36
CTNS-201ENST00000046640 CYP2A13Q16696 494 aa12.81□□□□□ -0.36
CTNS-201ENST00000046640 COQ5Q5HYK3 327 aa12.81□□□□□ -0.36
CTNS-201ENST00000046640 SULT1C3Q6IMI6 304 aa12.81□□□□□ -0.36
CTNS-201ENST00000046640 SPESP1Q6UW49 350 aa12.81□□□□□ -0.36
CTNS-201ENST00000046640 GCNT7Q6ZNI0 430 aa12.81□□□□□ -0.36
CTNS-201ENST00000046640 USP45Q70EL2 814 aa12.81□□□□□ -0.36
CTNS-201ENST00000046640 TMCO5AQ8N6Q1 288 aa12.81□□□□□ -0.36
CTNS-201ENST00000046640 CDC26Q8NHZ8 85 aa12.81□□□□□ -0.36
CTNS-201ENST00000046640 ADAMTS16Q8TE57 1224 aa12.81□□□□□ -0.36
CTNS-201ENST00000046640 SLC13A3Q8WWT9 602 aa12.81□□□□□ -0.36
CTNS-201ENST00000046640 LRTM1Q9HBL6 345 aa12.81□□□□□ -0.36
CTNS-201ENST00000046640 TMPRSS11EQ9UL52 423 aa12.81□□□□□ -0.36
CTNS-201ENST00000046640 EIF3LQ9Y262 564 aaKnown RBP12.81□□□□□ -0.36
CTNS-201ENST00000046640 DLGAP4Q9Y2H0 992 aa12.81□□□□□ -0.36
CTNS-201ENST00000046640 PCDHGA8Q9Y5G5 932 aa12.81□□□□□ -0.36
CTNS-201ENST00000046640 TRBV5-4A0A0C4DH59 114 aa12.8□□□□□ -0.36
CTNS-201ENST00000046640 FUOMA2VDF0 154 aa12.8□□□□□ -0.36
CTNS-201ENST00000046640 MANBAO00462 879 aa12.8□□□□□ -0.36
CTNS-201ENST00000046640 SOCS5O75159 536 aa12.8□□□□□ -0.36
CTNS-201ENST00000046640 GMNNO75496 209 aa12.8□□□□□ -0.36
CTNS-201ENST00000046640 WDR47O94967 919 aa12.8□□□□□ -0.36
CTNS-201ENST00000046640 LATS1O95835 1130 aa12.8□□□□□ -0.36
CTNS-201ENST00000046640 PDYNP01213 254 aa12.8□□□□□ -0.36
CTNS-201ENST00000046640 ENO2P09104 434 aaPredicted RBP12.8□□□□□ -0.36
CTNS-201ENST00000046640 EFNA1P20827 205 aaPredicted RBP12.8□□□□□ -0.36
CTNS-201ENST00000046640 GNPDA1P46926 289 aa12.8□□□□□ -0.36
CTNS-201ENST00000046640 CHRNB3Q05901 458 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms