RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 KRTCAP2Q8N6L1 136 aa11.78□□□□□ -0.52
CHPF2-201ENST00000035307 SMARCD2Q92925 531 aa11.78□□□□□ -0.52
CHPF2-201ENST00000035307 ASB9Q96DX5 294 aa11.78□□□□□ -0.52
CHPF2-201ENST00000035307 MRPS26Q9BYN8 205 aaKnown RBP11.78□□□□□ -0.52
CHPF2-201ENST00000035307 TFB2MQ9H5Q4 396 aaKnown RBP11.78□□□□□ -0.52
CHPF2-201ENST00000035307 FBXL12Q9NXK8 326 aa11.78□□□□□ -0.52
CHPF2-201ENST00000035307 KCTD5Q9NXV2 234 aa11.78□□□□□ -0.52
CHPF2-201ENST00000035307 SMPD3Q9NY59 655 aaPredicted RBP11.78□□□□□ -0.52
CHPF2-201ENST00000035307 TESMINQ9Y4I5 508 aa11.78□□□□□ -0.52
CHPF2-201ENST00000035307 RSL1D1O76021 490 aaKnown RBP11.78□□□□□ -0.52
CHPF2-201ENST00000035307 ANXA4P09525 319 aaPredicted RBP11.78□□□□□ -0.52
CHPF2-201ENST00000035307 CD1DP15813 335 aa11.78□□□□□ -0.52
CHPF2-201ENST00000035307 C21orf59P57076 290 aa11.78□□□□□ -0.52
CHPF2-201ENST00000035307 NFKB2Q00653 900 aa11.78□□□□□ -0.52
CHPF2-201ENST00000035307 ADRM1Q16186 407 aa11.78□□□□□ -0.52
CHPF2-201ENST00000035307 MAVSQ7Z434 540 aa11.78□□□□□ -0.52
CHPF2-201ENST00000035307 SYVN1Q86TM6 617 aa11.78□□□□□ -0.52
CHPF2-201ENST00000035307 NUDT8Q8WV74 236 aa11.78□□□□□ -0.52
CHPF2-201ENST00000035307 RPP25Q9BUL9 199 aaKnown RBP11.78□□□□□ -0.52
CHPF2-201ENST00000035307 SMURF2Q9HAU4 748 aa11.78□□□□□ -0.52
CHPF2-201ENST00000035307 IL36AQ9UHA7 158 aa11.78□□□□□ -0.52
CHPF2-201ENST00000035307 KCNK6Q9Y257 313 aa11.78□□□□□ -0.52
CHPF2-201ENST00000035307 SMIM31A0A1B0GVY4 71 aa11.78□□□□□ -0.52
CHPF2-201ENST00000035307 KAT7O95251 611 aa11.78□□□□□ -0.52
CHPF2-201ENST00000035307 SERPINA1P01009 418 aa11.78□□□□□ -0.52
CHPF2-201ENST00000035307 TGFB1P01137 390 aa11.78□□□□□ -0.52
CHPF2-201ENST00000035307 MAPK8P45983 427 aa11.78□□□□□ -0.52
CHPF2-201ENST00000035307 DCTN2Q13561 401 aaKnown RBP11.78□□□□□ -0.52
CHPF2-201ENST00000035307 SUSD1Q6UWL2 747 aa11.78□□□□□ -0.52
CHPF2-201ENST00000035307 SFTPA1Q8IWL2 248 aa11.78□□□□□ -0.52
CHPF2-201ENST00000035307 ASZ1Q8WWH4 475 aa11.78□□□□□ -0.52
CHPF2-201ENST00000035307 BBS4Q96RK4 519 aa11.78□□□□□ -0.52
CHPF2-201ENST00000035307 TPK1Q9H3S4 243 aa11.78□□□□□ -0.52
CHPF2-201ENST00000035307 FANCEQ9HB96 536 aa11.78□□□□□ -0.52
CHPF2-201ENST00000035307 DNAJC11Q9NVH1 559 aa11.78□□□□□ -0.52
CHPF2-201ENST00000035307 ADPRHL2Q9NX46 363 aa11.78□□□□□ -0.52
CHPF2-201ENST00000035307 DAPK2Q9UIK4 370 aa11.78□□□□□ -0.52
CHPF2-201ENST00000035307 LCTP09848 1927 aa11.78□□□□□ -0.52
CHPF2-201ENST00000035307 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.77□□□□□ -0.52
CHPF2-201ENST00000035307 SLC28A1O00337 649 aa11.77□□□□□ -0.52
CHPF2-201ENST00000035307 FPGTO14772 594 aa11.77□□□□□ -0.52
CHPF2-201ENST00000035307 PTNP21246 168 aa11.77□□□□□ -0.52
CHPF2-201ENST00000035307 PRDX6P30041 224 aa11.77□□□□□ -0.52
CHPF2-201ENST00000035307 RPS7P62081 194 aaKnown RBP11.77□□□□□ -0.52
CHPF2-201ENST00000035307 PRKCQQ04759 706 aa11.77□□□□□ -0.52
CHPF2-201ENST00000035307 SEMA3AQ14563 771 aa11.77□□□□□ -0.52
CHPF2-201ENST00000035307 PCBP2Q15366 365 aaKnown RBP eCLIP11.77□□□□□ -0.525e-7■■□□□ 14
CHPF2-201ENST00000035307 PTCHD3Q3KNS1 767 aa11.77□□□□□ -0.52
CHPF2-201ENST00000035307 GPRC6AQ5T6X5 926 aa11.77□□□□□ -0.52
CHPF2-201ENST00000035307 MFSD4BQ5TF39 518 aa11.77□□□□□ -0.52
CHPF2-201ENST00000035307 CERS6Q6ZMG9 384 aa11.77□□□□□ -0.52
CHPF2-201ENST00000035307 GOLGA7Q7Z5G4 137 aa11.77□□□□□ -0.52
CHPF2-201ENST00000035307 TBC1D21Q8IYX1 336 aa11.77□□□□□ -0.52
CHPF2-201ENST00000035307 HERVK_113Q902F9 699 aa11.77□□□□□ -0.52
CHPF2-201ENST00000035307 CENPNQ96H22 339 aaPredicted RBP11.77□□□□□ -0.52
CHPF2-201ENST00000035307 PPP1R16AQ96I34 528 aa11.77□□□□□ -0.52
CHPF2-201ENST00000035307 IL21Q9HBE4 155 aa11.77□□□□□ -0.52
CHPF2-201ENST00000035307 PDP1Q9P0J1 537 aaPredicted RBP11.77□□□□□ -0.52
CHPF2-201ENST00000035307 C3orf18Q9UK00 162 aa11.77□□□□□ -0.52
CHPF2-201ENST00000035307 YBX2Q9Y2T7 364 aaKnown RBP11.77□□□□□ -0.52
CHPF2-201ENST00000035307 TRMUO75648 421 aaKnown RBP11.77□□□□□ -0.52
CHPF2-201ENST00000035307 IL7RP16871 459 aa11.77□□□□□ -0.52
CHPF2-201ENST00000035307 ERVK-8P63133 956 aa11.77□□□□□ -0.52
CHPF2-201ENST00000035307 AAK1Q2M2I8 961 aa11.77□□□□□ -0.52
CHPF2-201ENST00000035307 CTC1Q2NKJ3 1217 aa11.77□□□□□ -0.52
CHPF2-201ENST00000035307 DENND5AQ6IQ26 1287 aa11.77□□□□□ -0.52
CHPF2-201ENST00000035307 SPATA19Q7Z5L4 167 aa11.77□□□□□ -0.52
CHPF2-201ENST00000035307 OR13J1Q8NGT2 312 aa11.77□□□□□ -0.52
CHPF2-201ENST00000035307 ARMC5Q96C12 935 aa11.77□□□□□ -0.52
CHPF2-201ENST00000035307 CXorf21Q9HAI6 301 aa11.77□□□□□ -0.52
CHPF2-201ENST00000035307 INTS6Q9UL03 887 aaKnown RBP11.77□□□□□ -0.52
CHPF2-201ENST00000035307 PCDHB1Q9Y5F3 818 aa11.77□□□□□ -0.52
CHPF2-201ENST00000035307 DFNA5O60443 496 aa11.77□□□□□ -0.53
CHPF2-201ENST00000035307 BPIP17213 487 aa11.77□□□□□ -0.53
CHPF2-201ENST00000035307 LEPRP48357 1165 aaKnown RBP11.77□□□□□ -0.53
CHPF2-201ENST00000035307 RPS14P62263 151 aaKnown RBP11.77□□□□□ -0.53
CHPF2-201ENST00000035307 SPIBQ01892 262 aa11.77□□□□□ -0.53
CHPF2-201ENST00000035307 HKDC1Q2TB90 917 aa11.77□□□□□ -0.53
CHPF2-201ENST00000035307 TTC23Q5W5X9 447 aa11.77□□□□□ -0.53
CHPF2-201ENST00000035307 PDE12Q6L8Q7 609 aaKnown RBP11.77□□□□□ -0.53
CHPF2-201ENST00000035307 GPR153Q6NV75 609 aa11.77□□□□□ -0.53
CHPF2-201ENST00000035307 HMGN2P46Q86SG4 172 aa11.77□□□□□ -0.53
CHPF2-201ENST00000035307 FAM110BQ8TC76 370 aa11.77□□□□□ -0.53
CHPF2-201ENST00000035307 RLN3Q8WXF3 142 aa11.77□□□□□ -0.53
CHPF2-201ENST00000035307 LRCH3Q96II8 777 aa11.77□□□□□ -0.53
CHPF2-201ENST00000035307 EPB41L1Q9H4G0 881 aa11.77□□□□□ -0.53
CHPF2-201ENST00000035307 HEBP1Q9NRV9 189 aa11.77□□□□□ -0.53
CHPF2-201ENST00000035307 OR1A2Q9Y585 309 aa11.77□□□□□ -0.53
CHPF2-201ENST00000035307 COMMD3-BMI1R4GMX3 469 aa11.77□□□□□ -0.53
CHPF2-201ENST00000035307 CAPN14A8MX76 684 aa11.77□□□□□ -0.53
CHPF2-201ENST00000035307 PRNPP04156 253 aa11.77□□□□□ -0.53
CHPF2-201ENST00000035307 SLC7A1P30825 629 aa11.77□□□□□ -0.53
CHPF2-201ENST00000035307 RHDQ02161 417 aa11.77□□□□□ -0.53
CHPF2-201ENST00000035307 SF1Q15637 639 aaKnown RBP11.77□□□□□ -0.53
CHPF2-201ENST00000035307 C6orf136Q5SQH8 315 aa11.77□□□□□ -0.53
CHPF2-201ENST00000035307 DEF8Q6ZN54 512 aa11.77□□□□□ -0.53
CHPF2-201ENST00000035307 AHSA2Q719I0 299 aa11.77□□□□□ -0.53
CHPF2-201ENST00000035307 CYP2U1Q7Z449 544 aa11.77□□□□□ -0.53
CHPF2-201ENST00000035307 CCDC103Q8IW40 242 aa11.77□□□□□ -0.53
CHPF2-201ENST00000035307 OR8H2Q8N162 312 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms