RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 SPATA31A1Q5TZJ5 1347 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 ATP6AP2O75787 350 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 IDSP22304 550 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 CDH8P55286 799 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 PTPRRQ15256 657 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 TOMM20Q15388 145 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 KCNJ8Q15842 424 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 ZC3H12AQ5D1E8 599 aaKnown RBP5.97□□□□□ -1.45
VPS13D-201ENST00000011700 NOL9Q5SY16 702 aaKnown RBP5.97□□□□□ -1.45
VPS13D-201ENST00000011700 KANK2Q63ZY3 851 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 MTFR2Q6P444 385 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 UNC5AQ6ZN44 842 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 OR2AJ1Q8NGZ0 328 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 POC1BQ8TC44 478 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 DNASE1L2Q92874 299 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 CELF1Q92879 486 aaKnown RBP5.97□□□□□ -1.45
VPS13D-201ENST00000011700 HNRNPABQ99729 332 aaKnown RBP5.97□□□□□ -1.45
VPS13D-201ENST00000011700 SEMA4BQ9NPR2 832 aaPredicted RBP5.97□□□□□ -1.45
VPS13D-201ENST00000011700 FAM120CQ9NX05 1096 aaKnown RBP5.97□□□□□ -1.45
VPS13D-201ENST00000011700 PRAMEF22A3QJZ6 481 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 TSTD3H0UI37 97 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 LPLP06858 475 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 CCKBRP32239 447 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 CRYBB1P53674 252 aaPredicted RBP5.97□□□□□ -1.45
VPS13D-201ENST00000011700 MRPS5P82675 430 aaKnown RBP5.97□□□□□ -1.45
VPS13D-201ENST00000011700 GAD2Q05329 585 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 TIGD6Q17RP2 521 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 PRAMEF17Q5VTA0 474 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 HID1Q8IV36 788 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 ZNF440Q8IYI8 595 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 VANGL1Q8TAA9 524 aaPredicted RBP5.97□□□□□ -1.45
VPS13D-201ENST00000011700 WFIKKN2Q8TEU8 576 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 TMEM234Q8WY98 164 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 GAL3ST3Q96A11 431 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 BMFQ96LC9 184 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 SGK2Q9HBY8 427 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 KCNMB3Q9NPA1 279 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 SDHAF2Q9NX18 166 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 ZNF99A8MXY4 864 aaPredicted RBP5.97□□□□□ -1.45
VPS13D-201ENST00000011700 FAM86B1E9PN63 330 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 F5H423 210 aaPredicted RBP5.97□□□□□ -1.45
VPS13D-201ENST00000011700 FAM86B2P0C5J1 330 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 MAP3K8P41279 467 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 USF2Q15853 346 aaPredicted RBP5.97□□□□□ -1.45
VPS13D-201ENST00000011700 MOGQ16653 247 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 FAM86B1Q8N7N1 296 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 OR5K1Q8NHB7 308 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 AARSD1Q9BTE6 412 aaKnown RBP5.97□□□□□ -1.45
VPS13D-201ENST00000011700 GRHL1Q9NZI5 618 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 CNOT11Q9UKZ1 510 aaKnown RBP5.97□□□□□ -1.45
VPS13D-201ENST00000011700 LIPT1Q9Y234 373 aa5.97□□□□□ -1.45
VPS13D-201ENST00000011700 ACACAQ13085 2346 aa5.96□□□□□ -1.45
VPS13D-201ENST00000011700 NID2Q14112 1375 aa5.96□□□□□ -1.45
VPS13D-201ENST00000011700 E2F8A0AVK6 867 aa5.96□□□□□ -1.45
VPS13D-201ENST00000011700 FAM170AA1A519 330 aa5.96□□□□□ -1.45
VPS13D-201ENST00000011700 B3GALT2O43825 422 aa5.96□□□□□ -1.45
VPS13D-201ENST00000011700 POP4O95707 220 aaKnown RBP5.96□□□□□ -1.45
VPS13D-201ENST00000011700 VEGFAP15692 232 aaPredicted RBP5.96□□□□□ -1.45
VPS13D-201ENST00000011700 ERVK-9P63128 1117 aa5.96□□□□□ -1.45
VPS13D-201ENST00000011700 ZACNQ401N2 412 aa5.96□□□□□ -1.45
VPS13D-201ENST00000011700 SETD6Q8TBK2 473 aa5.96□□□□□ -1.45
VPS13D-201ENST00000011700 DPF2Q92785 391 aa5.96□□□□□ -1.45
VPS13D-201ENST00000011700 G6PC3Q9BUM1 346 aa5.96□□□□□ -1.45
VPS13D-201ENST00000011700 POPDC3Q9HBV1 291 aa5.96□□□□□ -1.45
VPS13D-201ENST00000011700 ARAP2Q8WZ64 1704 aa5.96□□□□□ -1.45
VPS13D-201ENST00000011700 MYOFQ9NZM1 2061 aa5.96□□□□□ -1.45
VPS13D-201ENST00000011700 ABHD14A-ACY1A0A1B0GW23 586 aa5.96□□□□□ -1.45
VPS13D-201ENST00000011700 A0A1W2PQ45 241 aaPredicted RBP5.96□□□□□ -1.45
VPS13D-201ENST00000011700 A0A1W2PQY0 241 aa5.96□□□□□ -1.45
VPS13D-201ENST00000011700 GRXCR2A6NFK2 248 aa5.96□□□□□ -1.45
VPS13D-201ENST00000011700 SCDO00767 359 aa5.96□□□□□ -1.45
VPS13D-201ENST00000011700 EEFSECP57772 596 aaKnown RBP5.96□□□□□ -1.45
VPS13D-201ENST00000011700 NOMO3P69849 1222 aa5.96□□□□□ -1.45
VPS13D-201ENST00000011700 HSPA14Q0VDF9 509 aa5.96□□□□□ -1.45
VPS13D-201ENST00000011700 NOMO1Q15155 1222 aa5.96□□□□□ -1.45
VPS13D-201ENST00000011700 TOMM5Q8N4H5 51 aa5.96□□□□□ -1.45
VPS13D-201ENST00000011700 LRRC57Q8N9N7 239 aa5.96□□□□□ -1.45
VPS13D-201ENST00000011700 TBC1D15Q8TC07 691 aa5.96□□□□□ -1.45
VPS13D-201ENST00000011700 GJD4Q96KN9 370 aaPredicted RBP5.96□□□□□ -1.45
VPS13D-201ENST00000011700 FCRL2Q96LA5 508 aaPredicted RBP5.96□□□□□ -1.45
VPS13D-201ENST00000011700 CITED4Q96RK1 184 aa5.96□□□□□ -1.45
VPS13D-201ENST00000011700 FN3KQ9H479 309 aa5.96□□□□□ -1.45
VPS13D-201ENST00000011700 CNTN6Q9UQ52 1028 aa5.96□□□□□ -1.45
VPS13D-201ENST00000011700 IFT52Q9Y366 437 aa5.96□□□□□ -1.45
VPS13D-201ENST00000011700 MED12Q93074 2177 aa5.96□□□□□ -1.45
VPS13D-201ENST00000011700 MT-ND5P03915 603 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 SRCP12931 536 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 ZNF30P17039 623 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 MLLT6P55198 1093 aaPredicted RBP5.96□□□□□ -1.46
VPS13D-201ENST00000011700 DLG2Q15700 870 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 HSDL1Q3SXM5 330 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 ECHDC2Q86YB7 292 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 RAVER1Q8IY67 606 aaKnown RBP5.96□□□□□ -1.46
VPS13D-201ENST00000011700 IQCKQ8N0W5 287 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 ZNF321PQ8N8H1 164 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 IL31RAQ8NI17 732 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 TBATAQ96M53 351 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 ZNF558Q96NG5 402 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 SEMA6BQ9H3T3 888 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 SLC28A3Q9HAS3 691 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms