RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Olfr1176Q8VG40 315 aa11.74□□□□□ -0.53
Trim56-201ENSMUST00000054384 2410137M14RikQ9CWF0 162 aa11.74□□□□□ -0.53
Trim56-201ENSMUST00000054384 ArskQ9D2L1 553 aa11.74□□□□□ -0.53
Trim56-201ENSMUST00000054384 Disp2Q8CIP5 1345 aa11.74□□□□□ -0.53
Trim56-201ENSMUST00000054384 Gm7792A0A0J9YU01 481 aa11.74□□□□□ -0.53
Trim56-201ENSMUST00000054384 Gm3183D3YUJ6 481 aa11.74□□□□□ -0.53
Trim56-201ENSMUST00000054384 Gm3139J3QK78 481 aa11.74□□□□□ -0.53
Trim56-201ENSMUST00000054384 Gm3106J3QPH3 481 aa11.74□□□□□ -0.53
Trim56-201ENSMUST00000054384 Tuba3aP05214 450 aaKnown RBP11.74□□□□□ -0.53
Trim56-201ENSMUST00000054384 Nr2f6P43136 390 aa11.74□□□□□ -0.53
Trim56-201ENSMUST00000054384 VldlrP98156 873 aa11.74□□□□□ -0.53
Trim56-201ENSMUST00000054384 Mtmr11Q3V1L6 700 aa11.74□□□□□ -0.53
Trim56-201ENSMUST00000054384 Cxcr1Q810W6 351 aa11.74□□□□□ -0.53
Trim56-201ENSMUST00000054384 Dppa4Q8CCG4 296 aa11.74□□□□□ -0.53
Trim56-201ENSMUST00000054384 PdgfcQ8CI19 345 aa11.74□□□□□ -0.53
Trim56-201ENSMUST00000054384 Grhl2Q8K5C0 625 aa11.74□□□□□ -0.53
Trim56-201ENSMUST00000054384 Ssu72Q9CY97 194 aaKnown RBP11.74□□□□□ -0.53
Trim56-201ENSMUST00000054384 Dusp12Q9D0T2 339 aa11.74□□□□□ -0.53
Trim56-201ENSMUST00000054384 Slc7a8Q9QXW9 531 aa11.74□□□□□ -0.53
Trim56-201ENSMUST00000054384 Gm7970L7N271 213 aa11.73□□□□□ -0.53
Trim56-201ENSMUST00000054384 Gm7980L7N471 213 aa11.73□□□□□ -0.53
Trim56-201ENSMUST00000054384 Taf1aP97357 453 aa11.73□□□□□ -0.53
Trim56-201ENSMUST00000054384 Mbd3l1Q9D9H3 186 aa11.73□□□□□ -0.53
Trim56-201ENSMUST00000054384 Tsga13Q9DA17 273 aa11.73□□□□□ -0.53
Trim56-201ENSMUST00000054384 Psmd13Q9WVJ2 376 aa11.73□□□□□ -0.53
Trim56-201ENSMUST00000054384 Ascc3E9PZJ8 2198 aaKnown RBP11.73□□□□□ -0.53
Trim56-201ENSMUST00000054384 Gm7682A0A0J9YUM1 481 aa11.73□□□□□ -0.53
Trim56-201ENSMUST00000054384 Gm21293E9Q4G9 266 aa11.73□□□□□ -0.53
Trim56-201ENSMUST00000054384 Cpne9Q1RLL3 553 aa11.73□□□□□ -0.53
Trim56-201ENSMUST00000054384 Slc44a5Q5RJI2 710 aa11.73□□□□□ -0.53
Trim56-201ENSMUST00000054384 Brinp2Q6DFY8 783 aa11.73□□□□□ -0.53
Trim56-201ENSMUST00000054384 Olfr1105Q7TR58 312 aa11.73□□□□□ -0.53
Trim56-201ENSMUST00000054384 March4Q80TE3 409 aa11.73□□□□□ -0.53
Trim56-201ENSMUST00000054384 Nup54Q8BTS4 510 aaKnown RBP11.73□□□□□ -0.53
Trim56-201ENSMUST00000054384 Gpr158Q8C419 1200 aa11.73□□□□□ -0.53
Trim56-201ENSMUST00000054384 Prps2Q9CS42 318 aa11.73□□□□□ -0.53
Trim56-201ENSMUST00000054384 Gm16434J3QN10 205 aa11.73□□□□□ -0.53
Trim56-201ENSMUST00000054384 4930555G01RikL7N253 205 aa11.73□□□□□ -0.53
Trim56-201ENSMUST00000054384 Prl4a1O35256 227 aa11.73□□□□□ -0.53
Trim56-201ENSMUST00000054384 Cdk14O35495 469 aa11.73□□□□□ -0.53
Trim56-201ENSMUST00000054384 Ltb4rO88855 351 aa11.73□□□□□ -0.53
Trim56-201ENSMUST00000054384 Gpd1P13707 349 aa11.73□□□□□ -0.53
Trim56-201ENSMUST00000054384 Hk3Q3TRM8 922 aa11.73□□□□□ -0.53
Trim56-201ENSMUST00000054384 Gm732Q3V0P9 516 aa11.73□□□□□ -0.53
Trim56-201ENSMUST00000054384 Pan3Q640Q5 837 aa11.73□□□□□ -0.53
Trim56-201ENSMUST00000054384 Olfr684Q7TRN8 312 aa11.73□□□□□ -0.53
Trim56-201ENSMUST00000054384 Hsfy2Q80Y37 392 aa11.73□□□□□ -0.53
Trim56-201ENSMUST00000054384 LppQ8BFW7 613 aa11.73□□□□□ -0.53
Trim56-201ENSMUST00000054384 Pyhin1Q8BV49 420 aa11.73□□□□□ -0.53
Trim56-201ENSMUST00000054384 Slx1bQ8BX32 270 aa11.73□□□□□ -0.53
Trim56-201ENSMUST00000054384 RhoqQ8R527 205 aa11.73□□□□□ -0.53
Trim56-201ENSMUST00000054384 Ncbp2Q9CQ49 156 aaKnown RBP11.73□□□□□ -0.53
Trim56-201ENSMUST00000054384 Borcs6Q9D6W8 360 aa11.73□□□□□ -0.53
Trim56-201ENSMUST00000054384 Cyp4a31F8WGU9 509 aa11.73□□□□□ -0.53
Trim56-201ENSMUST00000054384 Acsl1P41216 699 aa11.73□□□□□ -0.53
Trim56-201ENSMUST00000054384 Fbln1Q08879 705 aa11.73□□□□□ -0.53
Trim56-201ENSMUST00000054384 Lrrn1Q61809 716 aa11.73□□□□□ -0.53
Trim56-201ENSMUST00000054384 PrkciQ62074 595 aaKnown RBP11.73□□□□□ -0.53
Trim56-201ENSMUST00000054384 Q810N5 247 aa11.73□□□□□ -0.53
Trim56-201ENSMUST00000054384 Clba1Q8BHN9 321 aa11.73□□□□□ -0.53
Trim56-201ENSMUST00000054384 TpbglQ8C013 384 aa11.73□□□□□ -0.53
Trim56-201ENSMUST00000054384 Sh3rf3Q8C120 878 aa11.73□□□□□ -0.53
Trim56-201ENSMUST00000054384 FRRS1Q8K385 592 aa11.73□□□□□ -0.53
Trim56-201ENSMUST00000054384 Arpc2Q9CVB6 300 aa11.73□□□□□ -0.53
Trim56-201ENSMUST00000054384 Nrxn1Q9CS84 1514 aa11.73□□□□□ -0.53
Trim56-201ENSMUST00000054384 Olfr1023A2ASU6 311 aa11.73□□□□□ -0.53
Trim56-201ENSMUST00000054384 Mettl8A2AUU0 281 aa11.73□□□□□ -0.53
Trim56-201ENSMUST00000054384 Diras2Q5PR73 199 aa11.73□□□□□ -0.53
Trim56-201ENSMUST00000054384 Tm7sf2Q71KT5 418 aa11.73□□□□□ -0.53
Trim56-201ENSMUST00000054384 Olfr520E9Q518 316 aa11.73□□□□□ -0.53
Trim56-201ENSMUST00000054384 Slc9a3G3X939 829 aa11.73□□□□□ -0.53
Trim56-201ENSMUST00000054384 Zfp105G3X9I0 524 aa11.73□□□□□ -0.53
Trim56-201ENSMUST00000054384 Mboat4P0C7A3 435 aa11.73□□□□□ -0.53
Trim56-201ENSMUST00000054384 Btg3P50615 252 aa11.73□□□□□ -0.53
Trim56-201ENSMUST00000054384 Cpt2P52825 658 aaKnown RBP11.73□□□□□ -0.53
Trim56-201ENSMUST00000054384 FcamrQ2TB54 535 aa11.73□□□□□ -0.53
Trim56-201ENSMUST00000054384 Abraxas2Q3TCJ1 415 aa11.73□□□□□ -0.53
Trim56-201ENSMUST00000054384 Guk1Q64520 198 aa11.73□□□□□ -0.53
Trim56-201ENSMUST00000054384 Adam6bQ6IMH7 756 aa11.73□□□□□ -0.53
Trim56-201ENSMUST00000054384 Znf276Q8CE64 614 aa11.73□□□□□ -0.53
Trim56-201ENSMUST00000054384 Gatad2aQ8CHY6 629 aaKnown RBP11.73□□□□□ -0.53
Trim56-201ENSMUST00000054384 Rnf121Q8R1Z9 327 aa11.73□□□□□ -0.53
Trim56-201ENSMUST00000054384 SarafQ8R3Q0 334 aa11.73□□□□□ -0.53
Trim56-201ENSMUST00000054384 Olfr606Q8VGZ8 319 aa11.73□□□□□ -0.53
Trim56-201ENSMUST00000054384 Cir1Q9DA19 450 aa11.73□□□□□ -0.53
Trim56-201ENSMUST00000054384 Naa10Q9QY36 235 aa11.73□□□□□ -0.53
Trim56-201ENSMUST00000054384 Xrn1P97789 1719 aaKnown RBP11.73□□□□□ -0.53
Trim56-201ENSMUST00000054384 Gm3259D3YUK0 475 aa11.73□□□□□ -0.53
Trim56-201ENSMUST00000054384 Alox12eP55249 662 aa11.73□□□□□ -0.53
Trim56-201ENSMUST00000054384 Pip5k1bP70181 539 aa11.73□□□□□ -0.53
Trim56-201ENSMUST00000054384 Cln6Q3U466 308 aa11.73□□□□□ -0.53
Trim56-201ENSMUST00000054384 TceancQ3US16 359 aa11.73□□□□□ -0.53
Trim56-201ENSMUST00000054384 Ppm1hQ3UYC0 513 aa11.73□□□□□ -0.53
Trim56-201ENSMUST00000054384 Snrnp70Q62376 448 aaKnown RBP11.73□□□□□ -0.53
Trim56-201ENSMUST00000054384 Alkbh2Q6P6J4 239 aa11.73□□□□□ -0.53
Trim56-201ENSMUST00000054384 AptxQ7TQC5 342 aa11.73□□□□□ -0.53
Trim56-201ENSMUST00000054384 Acat2Q8CAY6 397 aa11.73□□□□□ -0.53
Trim56-201ENSMUST00000054384 Prokr2Q8K458 381 aa11.73□□□□□ -0.53
Trim56-201ENSMUST00000054384 Aimp2Q8R010 320 aa11.73□□□□□ -0.53
Trim56-201ENSMUST00000054384 Olfr342Q8VGK7 312 aa11.73□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 49.3 ms