RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Pla2g15Q8VEB4 412 aa13.15□□□□□ -0.3
Nup88-201ENSMUST00000035283 Olfr371Q8VGB8 312 aa13.15□□□□□ -0.3
Nup88-201ENSMUST00000035283 Uts2rQ8VIH9 385 aa13.15□□□□□ -0.3
Nup88-201ENSMUST00000035283 Cbr4Q91VT4 236 aa13.15□□□□□ -0.3
Nup88-201ENSMUST00000035283 Ska1Q9CPV1 254 aa13.15□□□□□ -0.3
Nup88-201ENSMUST00000035283 9030624G23RikQ9D308 155 aa13.15□□□□□ -0.3
Nup88-201ENSMUST00000035283 Gpr63Q9EQQ3 425 aa13.15□□□□□ -0.3
Nup88-201ENSMUST00000035283 Il1rl2Q9ERS7 574 aa13.15□□□□□ -0.3
Nup88-201ENSMUST00000035283 NfkbizQ9EST8 728 aa13.15□□□□□ -0.3
Nup88-201ENSMUST00000035283 Galk1Q9R0N0 392 aa13.15□□□□□ -0.3
Nup88-201ENSMUST00000035283 Zbtb18Q9WUK6 522 aa13.15□□□□□ -0.3
Nup88-201ENSMUST00000035283 Fcgr2P08101 330 aa13.14□□□□□ -0.31
Nup88-201ENSMUST00000035283 Vps26aP40336 327 aa13.14□□□□□ -0.31
Nup88-201ENSMUST00000035283 Sat1P48026 171 aa13.14□□□□□ -0.31
Nup88-201ENSMUST00000035283 Kcnj9P48543 393 aa13.14□□□□□ -0.31
Nup88-201ENSMUST00000035283 Eif4ebp2P70445 120 aa13.14□□□□□ -0.31
Nup88-201ENSMUST00000035283 ArvcfP98203 962 aa13.14□□□□□ -0.31
Nup88-201ENSMUST00000035283 Igfbp5Q07079 271 aa13.14□□□□□ -0.31
Nup88-201ENSMUST00000035283 Prickle1Q3U5C7 832 aa13.14□□□□□ -0.31
Nup88-201ENSMUST00000035283 Ermp1Q3UVK0 898 aaKnown RBP13.14□□□□□ -0.31
Nup88-201ENSMUST00000035283 Cdk15Q3V3A1 433 aa13.14□□□□□ -0.31
Nup88-201ENSMUST00000035283 Chsy3Q5DTK1 884 aa13.14□□□□□ -0.31
Nup88-201ENSMUST00000035283 Vsx2Q61412 361 aa13.14□□□□□ -0.31
Nup88-201ENSMUST00000035283 Il1rapQ61730 570 aa13.14□□□□□ -0.31
Nup88-201ENSMUST00000035283 Fam126aQ6P9N1 521 aa13.14□□□□□ -0.31
Nup88-201ENSMUST00000035283 Efr3aQ8BG67 819 aa13.14□□□□□ -0.31
Nup88-201ENSMUST00000035283 Fam126bQ8C729 530 aa13.14□□□□□ -0.31
Nup88-201ENSMUST00000035283 AcppQ8CE08 381 aa13.14□□□□□ -0.31
Nup88-201ENSMUST00000035283 Mbtps2Q8CHX6 515 aa13.14□□□□□ -0.31
Nup88-201ENSMUST00000035283 Prmt5Q8CIG8 637 aa13.14□□□□□ -0.31
Nup88-201ENSMUST00000035283 Zbtb20Q8K0L9 741 aa13.14□□□□□ -0.31
Nup88-201ENSMUST00000035283 Sf3b4Q8QZY9 424 aaKnown RBP13.14□□□□□ -0.31
Nup88-201ENSMUST00000035283 HnrnplQ8R081 586 aaKnown RBP13.14□□□□□ -0.31
Nup88-201ENSMUST00000035283 Tmem203Q8R235 136 aa13.14□□□□□ -0.31
Nup88-201ENSMUST00000035283 Asb9Q91ZT8 290 aa13.14□□□□□ -0.31
Nup88-201ENSMUST00000035283 Asb6Q91ZU1 418 aa13.14□□□□□ -0.31
Nup88-201ENSMUST00000035283 Katnbl1Q9CWJ3 299 aa13.14□□□□□ -0.31
Nup88-201ENSMUST00000035283 Moxd1Q9CXI3 613 aa13.14□□□□□ -0.31
Nup88-201ENSMUST00000035283 Ilf2Q9CXY6 390 aaKnown RBP13.14□□□□□ -0.31
Nup88-201ENSMUST00000035283 Rnf146Q9CZW6 359 aa13.14□□□□□ -0.31
Nup88-201ENSMUST00000035283 Nudt14Q9D142 222 aa13.14□□□□□ -0.31
Nup88-201ENSMUST00000035283 Cyp2c55Q9D816 490 aa13.14□□□□□ -0.31
Nup88-201ENSMUST00000035283 Scube2Q9JJS0 997 aa13.14□□□□□ -0.31
Nup88-201ENSMUST00000035283 Rhox2bA2A447 191 aa13.14□□□□□ -0.31
Nup88-201ENSMUST00000035283 Rhox2cA2AWL9 191 aa13.14□□□□□ -0.31
Nup88-201ENSMUST00000035283 Otud3B1AZ99 396 aa13.14□□□□□ -0.31
Nup88-201ENSMUST00000035283 Olfr543E9PWI5 336 aa13.14□□□□□ -0.31
Nup88-201ENSMUST00000035283 Zfp788E9Q980 884 aa13.14□□□□□ -0.31
Nup88-201ENSMUST00000035283 Calhm3J3QMI4 347 aa13.14□□□□□ -0.31
Nup88-201ENSMUST00000035283 Prkag1O54950 330 aa13.14□□□□□ -0.31
Nup88-201ENSMUST00000035283 FiglaO55208 194 aa13.14□□□□□ -0.31
Nup88-201ENSMUST00000035283 Arl6O88848 186 aa13.14□□□□□ -0.31
Nup88-201ENSMUST00000035283 Pax7P47239 503 aa13.14□□□□□ -0.31
Nup88-201ENSMUST00000035283 Arpp19P56212 112 aaKnown RBP13.14□□□□□ -0.31
Nup88-201ENSMUST00000035283 Rps24P62849 133 aaKnown RBP13.14□□□□□ -0.31
Nup88-201ENSMUST00000035283 Pdss2Q33DR3 401 aa13.14□□□□□ -0.31
Nup88-201ENSMUST00000035283 Tmem184cQ3TPR7 525 aa13.14□□□□□ -0.31
Nup88-201ENSMUST00000035283 B020004J07RikQ3UTC0 476 aa13.14□□□□□ -0.31
Nup88-201ENSMUST00000035283 Ddx4Q61496 702 aa13.14□□□□□ -0.31
Nup88-201ENSMUST00000035283 Igfbp7Q61581 281 aa13.14□□□□□ -0.31
Nup88-201ENSMUST00000035283 Fstl1Q62356 306 aa13.14□□□□□ -0.31
Nup88-201ENSMUST00000035283 MyorgQ69ZQ1 716 aa13.14□□□□□ -0.31
Nup88-201ENSMUST00000035283 RubcnQ80U62 956 aa13.14□□□□□ -0.31
Nup88-201ENSMUST00000035283 Krr1Q8BGA5 380 aaKnown RBP13.14□□□□□ -0.31
Nup88-201ENSMUST00000035283 QpctlQ8BH73 383 aa13.14□□□□□ -0.31
Nup88-201ENSMUST00000035283 HadhaQ8BMS1 763 aaKnown RBP13.14□□□□□ -0.31
Nup88-201ENSMUST00000035283 PgghgQ8BP56 690 aa13.14□□□□□ -0.31
Nup88-201ENSMUST00000035283 Taf10Q8K0H5 218 aa13.14□□□□□ -0.31
Nup88-201ENSMUST00000035283 Asb2Q8K0L0 634 aa13.14□□□□□ -0.31
Nup88-201ENSMUST00000035283 CcsapQ8QZT2 252 aa13.14□□□□□ -0.31
Nup88-201ENSMUST00000035283 GabrpQ8QZW7 440 aa13.14□□□□□ -0.31
Nup88-201ENSMUST00000035283 Eif3lQ8QZY1 564 aaKnown RBP13.14□□□□□ -0.31
Nup88-201ENSMUST00000035283 Rnf8Q8VC56 488 aa13.14□□□□□ -0.31
Nup88-201ENSMUST00000035283 Asz1Q8VD46 475 aa13.14□□□□□ -0.31
Nup88-201ENSMUST00000035283 Olfr447Q8VGP6 310 aa13.14□□□□□ -0.31
Nup88-201ENSMUST00000035283 Tmem246Q91YV9 403 aa13.14□□□□□ -0.31
Nup88-201ENSMUST00000035283 Vmp1Q99KU0 406 aa13.14□□□□□ -0.31
Nup88-201ENSMUST00000035283 EtfaQ99LC5 333 aaKnown RBP13.14□□□□□ -0.31
Nup88-201ENSMUST00000035283 Fbxo32Q9CPU7 355 aa13.14□□□□□ -0.31
Nup88-201ENSMUST00000035283 1700034I23RikQ9D9Q3 184 aa13.14□□□□□ -0.31
Nup88-201ENSMUST00000035283 Tex22Q9D9U4 189 aa13.14□□□□□ -0.31
Nup88-201ENSMUST00000035283 Rcan2Q9JHG2 197 aa13.14□□□□□ -0.31
Nup88-201ENSMUST00000035283 HaspinQ9Z0R0 754 aa13.14□□□□□ -0.31
Nup88-201ENSMUST00000035283 Cldn8Q9Z260 225 aa13.14□□□□□ -0.31
Nup88-201ENSMUST00000035283 Baz2bA2AUY4 2123 aa13.13□□□□□ -0.31
Nup88-201ENSMUST00000035283 Lcn5A2AJB7 192 aa13.13□□□□□ -0.31
Nup88-201ENSMUST00000035283 Gbp4A4UUI3 631 aa13.13□□□□□ -0.31
Nup88-201ENSMUST00000035283 EXOC1LB9EK06 172 aa13.13□□□□□ -0.31
Nup88-201ENSMUST00000035283 Gm20503G3UZK1 150 aa13.13□□□□□ -0.31
Nup88-201ENSMUST00000035283 Serpinb9eO08806 377 aa13.13□□□□□ -0.31
Nup88-201ENSMUST00000035283 Stc1O55183 247 aa13.13□□□□□ -0.31
Nup88-201ENSMUST00000035283 NfycP70353 335 aa13.13□□□□□ -0.31
Nup88-201ENSMUST00000035283 Wbp2P97765 261 aa13.13□□□□□ -0.31
Nup88-201ENSMUST00000035283 Ptpn2Q06180 406 aa13.13□□□□□ -0.31
Nup88-201ENSMUST00000035283 OsbpQ3B7Z2 805 aa13.13□□□□□ -0.31
Nup88-201ENSMUST00000035283 Secisbp2Q3U1C4 858 aaKnown RBP13.13□□□□□ -0.31
Nup88-201ENSMUST00000035283 CrxosQ3UL53 246 aa13.13□□□□□ -0.31
Nup88-201ENSMUST00000035283 Gba2Q69ZF3 918 aa13.13□□□□□ -0.31
Nup88-201ENSMUST00000035283 Inppl1Q6P549 1257 aa13.13□□□□□ -0.31
Nup88-201ENSMUST00000035283 Insig1Q8BGI3 259 aa13.13□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 21.4 ms