RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Znf711A2ANX9 761 aa16.07■□□□□ 0.16
Shh-201ENSMUST00000002708 Zfp788E9Q980 884 aa16.07■□□□□ 0.16
Shh-201ENSMUST00000002708 Vmn2r85G3UW56 850 aa16.07■□□□□ 0.16
Shh-201ENSMUST00000002708 Neurod4O09105 330 aa16.07■□□□□ 0.16
Shh-201ENSMUST00000002708 Vbp1P61759 196 aa16.07■□□□□ 0.16
Shh-201ENSMUST00000002708 Shcbp1lQ3TTP0 639 aa16.07■□□□□ 0.16
Shh-201ENSMUST00000002708 Gpr149Q3UVY1 732 aa16.07■□□□□ 0.16
Shh-201ENSMUST00000002708 Clca4bQ3UW98 925 aa16.07■□□□□ 0.16
Shh-201ENSMUST00000002708 Adam2Q60718 735 aa16.07■□□□□ 0.16
Shh-201ENSMUST00000002708 FaddQ61160 205 aa16.07■□□□□ 0.16
Shh-201ENSMUST00000002708 ChdhQ8BJ64 596 aa16.07■□□□□ 0.16
Shh-201ENSMUST00000002708 Tspan12Q8BKT6 305 aa16.07■□□□□ 0.16
Shh-201ENSMUST00000002708 Fastkd3Q8BSN9 661 aa16.07■□□□□ 0.16
Shh-201ENSMUST00000002708 Q8BWQ6 963 aa16.07■□□□□ 0.16
Shh-201ENSMUST00000002708 Vps4aQ8VEJ9 437 aa16.07■□□□□ 0.16
Shh-201ENSMUST00000002708 Paip2bQ91W45 136 aa16.07■□□□□ 0.16
Shh-201ENSMUST00000002708 Marc2Q922Q1 338 aa16.07■□□□□ 0.16
Shh-201ENSMUST00000002708 Tmem9Q9CR23 183 aa16.07■□□□□ 0.16
Shh-201ENSMUST00000002708 Q9CZV2 255 aa16.07■□□□□ 0.16
Shh-201ENSMUST00000002708 Det1Q9D0A0 550 aa16.07■□□□□ 0.16
Shh-201ENSMUST00000002708 Nos1apQ9D3A8 503 aa16.07■□□□□ 0.16
Shh-201ENSMUST00000002708 Adad2Q9D5P4 478 aa16.07■□□□□ 0.16
Shh-201ENSMUST00000002708 Cntd1Q9D995 334 aa16.07■□□□□ 0.16
Shh-201ENSMUST00000002708 GraspQ9JJA9 392 aa16.07■□□□□ 0.16
Shh-201ENSMUST00000002708 RhoaQ9QUI0 193 aa16.07■□□□□ 0.16
Shh-201ENSMUST00000002708 Clic1Q9Z1Q5 241 aaKnown RBP16.07■□□□□ 0.16
Shh-201ENSMUST00000002708 Smim17A0A504 109 aa16.07■□□□□ 0.16
Shh-201ENSMUST00000002708 SelenovD3YXG1 328 aa16.07■□□□□ 0.16
Shh-201ENSMUST00000002708 Gm4450E9Q007 373 aa16.07■□□□□ 0.16
Shh-201ENSMUST00000002708 Alkal1J3QPP8 127 aa16.07■□□□□ 0.16
Shh-201ENSMUST00000002708 Vmn2r21K7N6Y7 853 aa16.07■□□□□ 0.16
Shh-201ENSMUST00000002708 Vmn2r20L7N2B1 853 aa16.07■□□□□ 0.16
Shh-201ENSMUST00000002708 Gp1baO35930 734 aa16.07■□□□□ 0.16
Shh-201ENSMUST00000002708 Kcnj9P48543 393 aa16.07■□□□□ 0.16
Shh-201ENSMUST00000002708 Nudt2P56380 147 aa16.07■□□□□ 0.16
Shh-201ENSMUST00000002708 SmoP56726 793 aa16.07■□□□□ 0.16
Shh-201ENSMUST00000002708 Sec1P97353 368 aa16.07■□□□□ 0.16
Shh-201ENSMUST00000002708 Dnal1Q05A62 190 aa16.07■□□□□ 0.16
Shh-201ENSMUST00000002708 Hdgfl2Q3UMU9 669 aa16.07■□□□□ 0.16
Shh-201ENSMUST00000002708 Znrf3Q5SSZ7 913 aa16.07■□□□□ 0.16
Shh-201ENSMUST00000002708 Hsd3b4Q61767 373 aa16.07■□□□□ 0.16
Shh-201ENSMUST00000002708 Apex2Q68G58 516 aa16.07■□□□□ 0.16
Shh-201ENSMUST00000002708 Ppp2r2bQ6ZWR4 443 aa16.07■□□□□ 0.16
Shh-201ENSMUST00000002708 Nlrp10Q8CCN1 673 aa16.07■□□□□ 0.16
Shh-201ENSMUST00000002708 Mta1Q8K4B0 715 aaKnown RBP16.07■□□□□ 0.16
Shh-201ENSMUST00000002708 HnrnplQ8R081 586 aaKnown RBP16.07■□□□□ 0.16
Shh-201ENSMUST00000002708 Tmem161aQ8VCA6 480 aa16.07■□□□□ 0.16
Shh-201ENSMUST00000002708 Mtfr2Q8VED8 361 aa16.07■□□□□ 0.16
Shh-201ENSMUST00000002708 Msh4Q99MT2 958 aa16.07■□□□□ 0.16
Shh-201ENSMUST00000002708 Rgs18Q99PG4 235 aa16.07■□□□□ 0.16
Shh-201ENSMUST00000002708 Q9D937 123 aaKnown RBP16.07■□□□□ 0.16
Shh-201ENSMUST00000002708 C1qtnf3Q9ES30 246 aa16.07■□□□□ 0.16
Shh-201ENSMUST00000002708 Pkp3Q9QY23 797 aa16.07■□□□□ 0.16
Shh-201ENSMUST00000002708 Stau1Q9Z108 487 aaKnown RBP16.07■□□□□ 0.16
Shh-201ENSMUST00000002708 Sod3O09164 251 aa16.06■□□□□ 0.16
Shh-201ENSMUST00000002708 Angpt2O35608 496 aa16.06■□□□□ 0.16
Shh-201ENSMUST00000002708 Bnc1O35914 961 aa16.06■□□□□ 0.16
Shh-201ENSMUST00000002708 Gtf2h4O70422 463 aaKnown RBP16.06■□□□□ 0.16
Shh-201ENSMUST00000002708 MycP01108 439 aa16.06■□□□□ 0.16
Shh-201ENSMUST00000002708 P01636 108 aa16.06■□□□□ 0.16
Shh-201ENSMUST00000002708 GzmcP08882 248 aa16.06■□□□□ 0.16
Shh-201ENSMUST00000002708 Scg5P12961 212 aa16.06■□□□□ 0.16
Shh-201ENSMUST00000002708 Mbl1P39039 239 aa16.06■□□□□ 0.16
Shh-201ENSMUST00000002708 Pfdn6Q03958 127 aa16.06■□□□□ 0.16
Shh-201ENSMUST00000002708 Jmjd8Q3TA59 316 aa16.06■□□□□ 0.16
Shh-201ENSMUST00000002708 DtlQ3TLR7 729 aa16.06■□□□□ 0.16
Shh-201ENSMUST00000002708 Fbxw18Q3TSA9 469 aa16.06■□□□□ 0.16
Shh-201ENSMUST00000002708 HjurpQ6PG16 667 aa16.06■□□□□ 0.16
Shh-201ENSMUST00000002708 ToporsQ80Z37 1033 aa16.06■□□□□ 0.16
Shh-201ENSMUST00000002708 Prdm8Q8BZ97 687 aa16.06■□□□□ 0.16
Shh-201ENSMUST00000002708 Nuak2Q8BZN4 639 aa16.06■□□□□ 0.16
Shh-201ENSMUST00000002708 Ppp4r4Q8C0Y0 875 aa16.06■□□□□ 0.16
Shh-201ENSMUST00000002708 Olfr575Q8VH16 318 aa16.06■□□□□ 0.16
Shh-201ENSMUST00000002708 Q9CXL3 195 aa16.06■□□□□ 0.16
Shh-201ENSMUST00000002708 Ralgps2Q9ERD6 590 aa16.06■□□□□ 0.16
Shh-201ENSMUST00000002708 Adamts5Q9R001 930 aa16.06■□□□□ 0.16
Shh-201ENSMUST00000002708 Smad6O35182 495 aa16.06■□□□□ 0.16
Shh-201ENSMUST00000002708 Sat1P48026 171 aa16.06■□□□□ 0.16
Shh-201ENSMUST00000002708 Arnt2Q61324 712 aa16.06■□□□□ 0.16
Shh-201ENSMUST00000002708 Foxb2Q64733 428 aa16.06■□□□□ 0.16
Shh-201ENSMUST00000002708 B3galnt2Q8BG28 504 aa16.06■□□□□ 0.16
Shh-201ENSMUST00000002708 Gm6377Q8BHV4 303 aa16.06■□□□□ 0.16
Shh-201ENSMUST00000002708 Tmem214Q8BM55 687 aaKnown RBP16.06■□□□□ 0.16
Shh-201ENSMUST00000002708 Fndc3aQ8BX90 1198 aa16.06■□□□□ 0.16
Shh-201ENSMUST00000002708 Gykl1Q8C635 549 aa16.06■□□□□ 0.16
Shh-201ENSMUST00000002708 Acad9Q8JZN5 625 aaKnown RBP16.06■□□□□ 0.16
Shh-201ENSMUST00000002708 Txndc11Q8K2W3 948 aa16.06■□□□□ 0.16
Shh-201ENSMUST00000002708 Ccdc59Q8R2N0 240 aaKnown RBP16.06■□□□□ 0.16
Shh-201ENSMUST00000002708 Plekha4Q8VC98 588 aa16.06■□□□□ 0.16
Shh-201ENSMUST00000002708 Olfr806Q8VFI2 313 aa16.06■□□□□ 0.16
Shh-201ENSMUST00000002708 Nudt17Q9CWD3 296 aa16.06■□□□□ 0.16
Shh-201ENSMUST00000002708 Gpr63Q9EQQ3 425 aa16.06■□□□□ 0.16
Shh-201ENSMUST00000002708 Fezf2Q9ESP5 455 aa16.06■□□□□ 0.16
Shh-201ENSMUST00000002708 Ak1Q9R0Y5 194 aa16.06■□□□□ 0.16
Shh-201ENSMUST00000002708 Sae1Q9R1T2 350 aa16.06■□□□□ 0.16
Shh-201ENSMUST00000002708 Oas1eA0A0J9YV76 386 aa16.05■□□□□ 0.16
Shh-201ENSMUST00000002708 Rpl3lE9PWZ3 407 aa16.05■□□□□ 0.16
Shh-201ENSMUST00000002708 P01807 119 aa16.05■□□□□ 0.16
Shh-201ENSMUST00000002708 Isl1P61372 349 aa16.05■□□□□ 0.16
Shh-201ENSMUST00000002708 Emx1Q04742 257 aa16.05■□□□□ 0.16
Retrieved 100 of 22,080 RNA–protein pairs in 21.2 ms