RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 TSPYL4Q9UJ04 414 aa22.71■■□□□ 1.23
PHGDH-230ENST00000641927 ERVV-2B6SEH9 535 aa22.7■■□□□ 1.22
PHGDH-230ENST00000641927 ZNF853P0CG23 659 aa22.7■■□□□ 1.22
PHGDH-230ENST00000641927 BTBD11A6QL63 1104 aa22.69■■□□□ 1.22
PHGDH-230ENST00000641927 SYTL4Q96C24 671 aaPredicted RBP22.69■■□□□ 1.22
PHGDH-230ENST00000641927 CHL1O00533 1208 aa22.68■■□□□ 1.22
PHGDH-230ENST00000641927 FAM182BQ5T319 152 aa22.68■■□□□ 1.22
PHGDH-230ENST00000641927 TRMT2AQ8IZ69 625 aaKnown RBP22.68■■□□□ 1.22
PHGDH-230ENST00000641927 TMOD3Q9NYL9 352 aa22.67■■□□□ 1.22
PHGDH-230ENST00000641927 TOGARAM1Q9Y4F4 1720 aa22.66■■□□□ 1.22
PHGDH-230ENST00000641927 MRC1P22897 1456 aa22.66■■□□□ 1.22
PHGDH-230ENST00000641927 KRT27Q7Z3Y8 459 aa22.66■■□□□ 1.22
PHGDH-230ENST00000641927 ACSBG1Q96GR2 724 aa22.66■■□□□ 1.22
PHGDH-230ENST00000641927 BABAM1Q9NWV8 329 aa22.65■■□□□ 1.22
PHGDH-230ENST00000641927 KAT6BQ8WYB5 2073 aa22.65■■□□□ 1.22
PHGDH-230ENST00000641927 PRIM1P49642 420 aaKnown RBP22.65■■□□□ 1.22
PHGDH-230ENST00000641927 DOT1LQ8TEK3 1739 aa22.65■■□□□ 1.22
PHGDH-230ENST00000641927 EXOSC9Q06265 439 aaKnown RBP22.64■■□□□ 1.21
PHGDH-230ENST00000641927 SIPA1L3O60292 1781 aaPredicted RBP22.64■■□□□ 1.21
PHGDH-230ENST00000641927 BRWD3Q6RI45 1802 aa22.63■■□□□ 1.21
PHGDH-230ENST00000641927 RGS12O14924 1447 aa22.63■■□□□ 1.21
PHGDH-230ENST00000641927 SLC39A6Q13433 755 aa22.62■■□□□ 1.21
PHGDH-230ENST00000641927 TTC5Q8N0Z6 440 aa22.62■■□□□ 1.21
PHGDH-230ENST00000641927 KCNQ3O43525 872 aa22.61■■□□□ 1.21
PHGDH-230ENST00000641927 PIGBQ92521 554 aa22.61■■□□□ 1.21
PHGDH-230ENST00000641927 ITGB4P16144 1822 aa22.61■■□□□ 1.21
PHGDH-230ENST00000641927 ELL2O00472 640 aaPredicted RBP22.6■■□□□ 1.21
PHGDH-230ENST00000641927 ZNF790Q6PG37 636 aa22.6■■□□□ 1.21
PHGDH-230ENST00000641927 KDM3BQ7LBC6 1761 aa22.59■■□□□ 1.21
PHGDH-230ENST00000641927 KCNQ2O43526 872 aa22.58■■□□□ 1.21
PHGDH-230ENST00000641927 KRT24Q2M2I5 525 aa22.58■■□□□ 1.21
PHGDH-230ENST00000641927 BCL9O00512 1426 aa22.58■■□□□ 1.21
PHGDH-230ENST00000641927 C8orf58Q8NAV2 365 aa22.58■■□□□ 1.2
PHGDH-230ENST00000641927 FAM196AQ6ZSG2 479 aa22.57■■□□□ 1.2
PHGDH-230ENST00000641927 EIF4A1P60842 406 aaKnown RBP22.56■■□□□ 1.2
PHGDH-230ENST00000641927 TWISTNBQ3B726 338 aaPredicted RBP22.56■■□□□ 1.2
PHGDH-230ENST00000641927 TSPYL6Q8N831 410 aa22.56■■□□□ 1.2
PHGDH-230ENST00000641927 ASAP1Q9ULH1 1129 aa22.55■■□□□ 1.2
PHGDH-230ENST00000641927 ATG3Q9NT62 314 aa22.54■■□□□ 1.2
PHGDH-230ENST00000641927 PTCD1O75127 700 aaKnown RBP22.53■■□□□ 1.2
PHGDH-230ENST00000641927 ZNF496Q96IT1 587 aaPredicted RBP22.53■■□□□ 1.2
PHGDH-230ENST00000641927 FMNL2Q96PY5 1086 aa22.53■■□□□ 1.2
PHGDH-230ENST00000641927 RCAN3Q9UKA8 241 aa22.53■■□□□ 1.2
PHGDH-230ENST00000641927 CT47B1P0C2W7 299 aaPredicted RBP22.52■■□□□ 1.2
PHGDH-230ENST00000641927 PAPPAQ13219 1627 aa22.52■■□□□ 1.2
PHGDH-230ENST00000641927 PTF1AQ7RTS3 328 aa22.52■■□□□ 1.2
PHGDH-230ENST00000641927 EP400Q96L91 3159 aa22.51■■□□□ 1.19
PHGDH-230ENST00000641927 NHSQ6T4R5 1651 aa22.51■■□□□ 1.19
PHGDH-230ENST00000641927 VAMP4O75379 141 aa22.51■■□□□ 1.19
PHGDH-230ENST00000641927 RBM42Q9BTD8 480 aaKnown RBP22.51■■□□□ 1.19
PHGDH-230ENST00000641927 SBF2Q86WG5 1849 aa22.49■■□□□ 1.19
PHGDH-230ENST00000641927 TRIM37O94972 964 aa22.49■■□□□ 1.19
PHGDH-230ENST00000641927 GIGYF1O75420 1035 aaPredicted RBP22.49■■□□□ 1.19
PHGDH-230ENST00000641927 BCL11BQ9C0K0 894 aaPredicted RBP22.49■■□□□ 1.19
PHGDH-230ENST00000641927 NECTIN2Q92692 538 aa22.48■■□□□ 1.19
PHGDH-230ENST00000641927 BCL2L13Q9BXK5 485 aa22.48■■□□□ 1.19
PHGDH-230ENST00000641927 KCPQ6ZWJ8 1503 aa22.48■■□□□ 1.19
PHGDH-230ENST00000641927 UBR2Q8IWV8 1755 aa22.47■■□□□ 1.19
PHGDH-230ENST00000641927 PRAMEF22A3QJZ6 481 aa22.47■■□□□ 1.19
PHGDH-230ENST00000641927 TCERG1O14776 1098 aaKnown RBP22.47■■□□□ 1.19
PHGDH-230ENST00000641927 SNRPA1P09661 255 aaKnown RBP22.47■■□□□ 1.19
PHGDH-230ENST00000641927 EIF2S2P20042 333 aaKnown RBP22.47■■□□□ 1.19
PHGDH-230ENST00000641927 SMARCC1Q92922 1105 aaPredicted RBP22.47■■□□□ 1.19
PHGDH-230ENST00000641927 PALLDQ8WX93 1383 aa22.47■■□□□ 1.19
PHGDH-230ENST00000641927 HEG1Q9ULI3 1381 aa22.47■■□□□ 1.19
PHGDH-230ENST00000641927 BTAF1O14981 1849 aa22.46■■□□□ 1.19
PHGDH-230ENST00000641927 RARSP54136 660 aaKnown RBP22.46■■□□□ 1.19
PHGDH-230ENST00000641927 SOS1Q07889 1333 aaPredicted RBP22.46■■□□□ 1.19
PHGDH-230ENST00000641927 HOXB7P09629 217 aa22.46■■□□□ 1.19
PHGDH-230ENST00000641927 HDGFL1Q5TGJ6 251 aa22.46■■□□□ 1.19
PHGDH-230ENST00000641927 ZNF428Q96B54 188 aa22.46■■□□□ 1.19
PHGDH-230ENST00000641927 SMC4Q9NTJ3 1288 aa22.46■■□□□ 1.19
PHGDH-230ENST00000641927 BCAR3O75815 825 aa22.44■■□□□ 1.18
PHGDH-230ENST00000641927 SSH1Q8WYL5 1049 aa22.44■■□□□ 1.18
PHGDH-230ENST00000641927 SUPT16HQ9Y5B9 1047 aaKnown RBP22.44■■□□□ 1.18
PHGDH-230ENST00000641927 CCDC30Q5VVM6 783 aa22.43■■□□□ 1.18
PHGDH-230ENST00000641927 ALDH1L2Q3SY69 923 aa22.42■■□□□ 1.18
PHGDH-230ENST00000641927 C5P01031 1676 aa22.42■■□□□ 1.18
PHGDH-230ENST00000641927 LOC102724428A0A0B4J2F2 783 aa22.42■■□□□ 1.18
PHGDH-230ENST00000641927 SIK1P57059 783 aa22.42■■□□□ 1.18
PHGDH-230ENST00000641927 VSIG10Q8N0Z9 540 aa22.42■■□□□ 1.18
PHGDH-230ENST00000641927 STK31Q9BXU1 1019 aa22.42■■□□□ 1.18
PHGDH-230ENST00000641927 CHMP4AQ9BY43 222 aa22.42■■□□□ 1.18
PHGDH-230ENST00000641927 ATP6V1AP38606 617 aa22.41■■□□□ 1.18
PHGDH-230ENST00000641927 USP16Q9Y5T5 823 aa22.41■■□□□ 1.18
PHGDH-230ENST00000641927 SLC4A9Q96Q91 983 aa22.4■■□□□ 1.18
PHGDH-230ENST00000641927 DNAJC10Q8IXB1 793 aa22.39■■□□□ 1.18
PHGDH-230ENST00000641927 TEX13AQ9BXU3 409 aaPredicted RBP22.39■■□□□ 1.18
PHGDH-230ENST00000641927 SLC4A2P04920 1241 aa22.39■■□□□ 1.17
PHGDH-230ENST00000641927 FRAT1Q92837 279 aaPredicted RBP22.39■■□□□ 1.17
PHGDH-230ENST00000641927 CANXP27824 592 aaKnown RBP22.38■■□□□ 1.17
PHGDH-230ENST00000641927 CHPF2Q9P2E5 772 aa22.38■■□□□ 1.17
PHGDH-230ENST00000641927 STARD3NLO95772 234 aa22.37■■□□□ 1.17
PHGDH-230ENST00000641927 APBA3O96018 575 aa22.37■■□□□ 1.17
PHGDH-230ENST00000641927 MRPL50Q8N5N7 158 aaKnown RBP22.37■■□□□ 1.17
PHGDH-230ENST00000641927 LAMB4A4D0S4 1761 aa22.37■■□□□ 1.17
PHGDH-230ENST00000641927 DBF4Q9UBU7 674 aaPredicted RBP22.36■■□□□ 1.17
PHGDH-230ENST00000641927 KCNQ4P56696 695 aa22.36■■□□□ 1.17
PHGDH-230ENST00000641927 CCNL1Q9UK58 526 aaPredicted RBP22.36■■□□□ 1.17
PHGDH-230ENST00000641927 PLIN1O60240 522 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 119.4 ms