RNA–Protein interactions for RNA: ENST00000641923.1

SAMMSON-223, survival associated mitochondrial melanoma specific oncogenic non-coding RNA, human

Gene SAMMSON, Length 1,213 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SAMMSON-223	ENST00000641923	DDX54	Q8TDD1	881 aa	Known RBP	11.71	□□□□□ -0.53
SAMMSON-223	ENST00000641923	MRC1	P22897	1456 aa		11.7	□□□□□ -0.54
SAMMSON-223	ENST00000641923	BRWD3	Q6RI45	1802 aa		11.7	□□□□□ -0.54
SAMMSON-223	ENST00000641923	NEUROD2	Q15784	382 aa		11.7	□□□□□ -0.54
SAMMSON-223	ENST00000641923	POTEA	Q6S8J7	498 aa		11.7	□□□□□ -0.54
SAMMSON-223	ENST00000641923	FAM196A	Q6ZSG2	479 aa		11.7	□□□□□ -0.54
SAMMSON-223	ENST00000641923	WWC1	Q8IX03	1113 aa		11.7	□□□□□ -0.54
SAMMSON-223	ENST00000641923	CHMP4A	Q9BY43	222 aa		11.7	□□□□□ -0.54
SAMMSON-223	ENST00000641923	RGS12	O14924	1447 aa		11.69	□□□□□ -0.54
SAMMSON-223	ENST00000641923	RNMT	O43148	476 aa	Known RBP	11.69	□□□□□ -0.54
SAMMSON-223	ENST00000641923	ATXN8OS	P0DMR3	200 aa		11.69	□□□□□ -0.54
SAMMSON-223	ENST00000641923	GNAI1	P63096	354 aa		11.69	□□□□□ -0.54
SAMMSON-223	ENST00000641923	GOLGA2	Q08379	1002 aa		11.69	□□□□□ -0.54
SAMMSON-223	ENST00000641923	MYH16	Q9H6N6	1097 aa		11.69	□□□□□ -0.54
SAMMSON-223	ENST00000641923		E9PSI1	815 aa		11.68	□□□□□ -0.54
SAMMSON-223	ENST00000641923	CABP4	P57796	275 aa		11.68	□□□□□ -0.54
SAMMSON-223	ENST00000641923	TAF7	Q15545	349 aa	Predicted RBP	11.68	□□□□□ -0.54
SAMMSON-223	ENST00000641923	MARCH10	Q8NA82	808 aa	Predicted RBP	11.68	□□□□□ -0.54
SAMMSON-223	ENST00000641923	CFAP44	Q96MT7	982 aa		11.68	□□□□□ -0.54
SAMMSON-223	ENST00000641923	IFT57	Q9NWB7	429 aa		11.68	□□□□□ -0.54
SAMMSON-223	ENST00000641923	TRIM35	Q9UPQ4	493 aa		11.68	□□□□□ -0.54
SAMMSON-223	ENST00000641923	RRP7A	Q9Y3A4	280 aa	Known RBP	11.68	□□□□□ -0.54
SAMMSON-223	ENST00000641923	SIPA1L3	O60292	1781 aa	Predicted RBP	11.68	□□□□□ -0.54
SAMMSON-223	ENST00000641923	KDM6A	O15550	1401 aa	Predicted RBP	11.68	□□□□□ -0.54
SAMMSON-223	ENST00000641923	ITGB4	P16144	1822 aa		11.67	□□□□□ -0.54
SAMMSON-223	ENST00000641923	ZNF521	Q96K83	1311 aa		11.67	□□□□□ -0.54
SAMMSON-223	ENST00000641923	DOT1L	Q8TEK3	1739 aa		11.67	□□□□□ -0.54
SAMMSON-223	ENST00000641923	MPRIP	Q6WCQ1	1025 aa		11.67	□□□□□ -0.54
SAMMSON-223	ENST00000641923	IL17RE	Q8NFR9	667 aa		11.67	□□□□□ -0.54
SAMMSON-223	ENST00000641923	SLC52A2	Q9HAB3	445 aa		11.67	□□□□□ -0.54
SAMMSON-223	ENST00000641923	TMOD3	Q9NYL9	352 aa		11.67	□□□□□ -0.54
SAMMSON-223	ENST00000641923	NHS	Q6T4R5	1651 aa		11.67	□□□□□ -0.54
SAMMSON-223	ENST00000641923	SBF2	Q86WG5	1849 aa		11.67	□□□□□ -0.54
SAMMSON-223	ENST00000641923	SOS1	Q07889	1333 aa	Predicted RBP	11.66	□□□□□ -0.54
SAMMSON-223	ENST00000641923	SMARCC1	Q92922	1105 aa	Predicted RBP	11.66	□□□□□ -0.54
SAMMSON-223	ENST00000641923	MCM10	Q7L590	875 aa		11.65	□□□□□ -0.54
SAMMSON-223	ENST00000641923	TOGARAM1	Q9Y4F4	1720 aa		11.64	□□□□□ -0.55
SAMMSON-223	ENST00000641923	BTBD11	A6QL63	1104 aa		11.64	□□□□□ -0.55
SAMMSON-223	ENST00000641923	CT47B1	P0C2W7	299 aa	Predicted RBP	11.64	□□□□□ -0.55
SAMMSON-223	ENST00000641923	TTC5	Q8N0Z6	440 aa		11.64	□□□□□ -0.55
SAMMSON-223	ENST00000641923	BCL11B	Q9C0K0	894 aa	Predicted RBP	11.64	□□□□□ -0.55
SAMMSON-223	ENST00000641923	ZBTB12	Q9Y330	459 aa	Predicted RBP	11.64	□□□□□ -0.55
SAMMSON-223	ENST00000641923	KDM3B	Q7LBC6	1761 aa		11.64	□□□□□ -0.55
SAMMSON-223	ENST00000641923	CHL1	O00533	1208 aa		11.63	□□□□□ -0.55
SAMMSON-223	ENST00000641923	ZNF853	P0CG23	659 aa		11.63	□□□□□ -0.55
SAMMSON-223	ENST00000641923	CCDC125	Q86Z20	511 aa		11.63	□□□□□ -0.55
SAMMSON-223	ENST00000641923	LGR6	Q9HBX8	967 aa		11.63	□□□□□ -0.55
SAMMSON-223	ENST00000641923	TSPYL4	Q9UJ04	414 aa		11.63	□□□□□ -0.55
SAMMSON-223	ENST00000641923	SALL2	Q9Y467	1007 aa	Predicted RBP	11.63	□□□□□ -0.55
SAMMSON-223	ENST00000641923	PAPPA	Q13219	1627 aa		11.63	□□□□□ -0.55
SAMMSON-223	ENST00000641923	HOXB7	P09629	217 aa		11.62	□□□□□ -0.55
SAMMSON-223	ENST00000641923	DCTN1	Q14203	1278 aa		11.62	□□□□□ -0.55
SAMMSON-223	ENST00000641923	NFATC2IP	Q8NCF5	419 aa		11.62	□□□□□ -0.55
SAMMSON-223	ENST00000641923	ZNF428	Q96B54	188 aa		11.62	□□□□□ -0.55
SAMMSON-223	ENST00000641923	SYTL4	Q96C24	671 aa	Predicted RBP	11.62	□□□□□ -0.55
SAMMSON-223	ENST00000641923	ZNF831	Q5JPB2	1677 aa		11.62	□□□□□ -0.55
SAMMSON-223	ENST00000641923	UBR2	Q8IWV8	1755 aa		11.62	□□□□□ -0.55
SAMMSON-223	ENST00000641923	BTAF1	O14981	1849 aa		11.61	□□□□□ -0.55
SAMMSON-223	ENST00000641923	PRIM1	P49642	420 aa	Known RBP	11.61	□□□□□ -0.55
SAMMSON-223	ENST00000641923	SLFN5	Q08AF3	891 aa		11.61	□□□□□ -0.55
SAMMSON-223	ENST00000641923	ZNF790	Q6PG37	636 aa		11.61	□□□□□ -0.55
SAMMSON-223	ENST00000641923	VSIG10	Q8N0Z9	540 aa		11.61	□□□□□ -0.55
SAMMSON-223	ENST00000641923	YTHDC1	Q96MU7	727 aa	Known RBP	11.61	□□□□□ -0.55
SAMMSON-223	ENST00000641923	FMNL2	Q96PY5	1086 aa		11.61	□□□□□ -0.55
SAMMSON-223	ENST00000641923	TEX13A	Q9BXU3	409 aa	Predicted RBP	11.61	□□□□□ -0.55
SAMMSON-223	ENST00000641923	RGPD3	A6NKT7	1758 aa	Predicted RBP	11.61	□□□□□ -0.55
SAMMSON-223	ENST00000641923	RGPD4	Q7Z3J3	1758 aa		11.61	□□□□□ -0.55
SAMMSON-223	ENST00000641923	CACNA1F	O60840	1977 aa		11.61	□□□□□ -0.55
SAMMSON-223	ENST00000641923	SF3B2	Q13435	895 aa	Known RBP	11.6	□□□□□ -0.55
SAMMSON-223	ENST00000641923	PIGB	Q92521	554 aa		11.6	□□□□□ -0.55
SAMMSON-223	ENST00000641923	ANP32E	Q9BTT0	268 aa		11.6	□□□□□ -0.55
SAMMSON-223	ENST00000641923	LAS1L	Q9Y4W2	734 aa	Known RBP	11.6	□□□□□ -0.55
SAMMSON-223	ENST00000641923	CIC	Q96RK0	1608 aa	Predicted RBP	11.6	□□□□□ -0.55
SAMMSON-223	ENST00000641923	TRMT2A	Q8IZ69	625 aa	Known RBP	11.59	□□□□□ -0.55
SAMMSON-223	ENST00000641923	THUMPD2	Q9BTF0	503 aa	Known RBP	11.59	□□□□□ -0.55
SAMMSON-223	ENST00000641923	MBIP	Q9NS73	344 aa		11.59	□□□□□ -0.55
SAMMSON-223	ENST00000641923	FANCI	Q9NVI1	1328 aa		11.59	□□□□□ -0.55
SAMMSON-223	ENST00000641923	PLSCR1	O15162	318 aa		11.58	□□□□□ -0.56
SAMMSON-223	ENST00000641923	ACSBG1	Q96GR2	724 aa		11.58	□□□□□ -0.56
SAMMSON-223	ENST00000641923	PALLD	Q8WX93	1383 aa		11.57	□□□□□ -0.56
SAMMSON-223	ENST00000641923	SNRPA1	P09661	255 aa	Known RBP	11.57	□□□□□ -0.56
SAMMSON-223	ENST00000641923	EIF4A1	P60842	406 aa	Known RBP	11.57	□□□□□ -0.56
SAMMSON-223	ENST00000641923	DUSP27	Q5VZP5	1158 aa		11.57	□□□□□ -0.56
SAMMSON-223	ENST00000641923	LY75	O60449	1722 aa		11.57	□□□□□ -0.56
SAMMSON-223	ENST00000641923	ERBB4	Q15303	1308 aa		11.57	□□□□□ -0.56
SAMMSON-223	ENST00000641923	LAMB4	A4D0S4	1761 aa		11.56	□□□□□ -0.56
SAMMSON-223	ENST00000641923	HEG1	Q9ULI3	1381 aa		11.56	□□□□□ -0.56
SAMMSON-223	ENST00000641923	SLC27A3	Q5K4L6	730 aa		11.56	□□□□□ -0.56
SAMMSON-223	ENST00000641923	TNS1	Q9HBL0	1735 aa	Known RBP	11.56	□□□□□ -0.56
SAMMSON-223	ENST00000641923	KCP	Q6ZWJ8	1503 aa		11.55	□□□□□ -0.56
SAMMSON-223	ENST00000641923	TRIM37	O94972	964 aa		11.55	□□□□□ -0.56
SAMMSON-223	ENST00000641923	BAG6	P46379	1132 aa		11.55	□□□□□ -0.56
SAMMSON-223	ENST00000641923	ATG3	Q9NT62	314 aa		11.55	□□□□□ -0.56
SAMMSON-223	ENST00000641923	LOC102724428	A0A0B4J2F2	783 aa		11.54	□□□□□ -0.56
SAMMSON-223	ENST00000641923	KCNQ2	O43526	872 aa		11.54	□□□□□ -0.56
SAMMSON-223	ENST00000641923	STARD3NL	O95772	234 aa		11.54	□□□□□ -0.56
SAMMSON-223	ENST00000641923	SIK1	P57059	783 aa		11.54	□□□□□ -0.56
SAMMSON-223	ENST00000641923	TWISTNB	Q3B726	338 aa	Predicted RBP	11.54	□□□□□ -0.56
SAMMSON-223	ENST00000641923	FAM182B	Q5T319	152 aa		11.54	□□□□□ -0.56
SAMMSON-223	ENST00000641923	TSR2	Q969E8	191 aa	Known RBP	11.54	□□□□□ -0.56

Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms