RNA–Protein interactions for RNA: ENST00000641756.1

PHGDH-226, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,132 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-226ENST00000641756 AMOTQ4VCS5 1084 aa22.32■■□□□ 1.16
PHGDH-226ENST00000641756 TEFQ10587 303 aa22.31■■□□□ 1.16
PHGDH-226ENST00000641756 BMP2KLQ5H9B9 411 aa22.31■■□□□ 1.16
PHGDH-226ENST00000641756 DCCP43146 1447 aa22.31■■□□□ 1.16
PHGDH-226ENST00000641756 EIF4A1P60842 406 aaKnown RBP22.31■■□□□ 1.16
PHGDH-226ENST00000641756 C1orf141Q5JVX7 400 aa22.31■■□□□ 1.16
PHGDH-226ENST00000641756 EIF2S2P20042 333 aaKnown RBP22.3■■□□□ 1.16
PHGDH-226ENST00000641756 RTL5Q5HYW3 569 aaPredicted RBP22.3■■□□□ 1.16
PHGDH-226ENST00000641756 C22orf23Q9BZE7 217 aa22.3■■□□□ 1.16
PHGDH-226ENST00000641756 KDM3BQ7LBC6 1761 aa22.29■■□□□ 1.16
PHGDH-226ENST00000641756 CAMTA1Q9Y6Y1 1673 aa22.29■■□□□ 1.16
PHGDH-226ENST00000641756 ERBB3P21860 1342 aa22.29■■□□□ 1.16
PHGDH-226ENST00000641756 BTBD11A6QL63 1104 aa22.29■■□□□ 1.16
PHGDH-226ENST00000641756 RNMTO43148 476 aaKnown RBP22.29■■□□□ 1.16
PHGDH-226ENST00000641756 CADPS2Q86UW7 1296 aa22.29■■□□□ 1.16
PHGDH-226ENST00000641756 CABLES1Q8TDN4 633 aa22.29■■□□□ 1.16
PHGDH-226ENST00000641756 PHAXQ9H814 394 aaKnown RBP22.29■■□□□ 1.16
PHGDH-226ENST00000641756 NCOA3Q9Y6Q9 1424 aa22.28■■□□□ 1.16
PHGDH-226ENST00000641756 APBB1O00213 710 aa22.28■■□□□ 1.16
PHGDH-226ENST00000641756 C16orf71Q8IYS4 520 aaPredicted RBP22.28■■□□□ 1.16
PHGDH-226ENST00000641756 CACNA1FO60840 1977 aa22.28■■□□□ 1.16
PHGDH-226ENST00000641756 BECN1Q14457 450 aa22.27■■□□□ 1.16
PHGDH-226ENST00000641756 PLEKHM2Q8IWE5 1019 aa22.27■■□□□ 1.15
PHGDH-226ENST00000641756 NPHP3Q7Z494 1330 aa22.26■■□□□ 1.15
PHGDH-226ENST00000641756 SMARCA5O60264 1052 aaPredicted RBP22.26■■□□□ 1.15
PHGDH-226ENST00000641756 GNAI2P04899 355 aa22.25■■□□□ 1.15
PHGDH-226ENST00000641756 NLRP2Q9NX02 1062 aa22.25■■□□□ 1.15
PHGDH-226ENST00000641756 OTUD7AQ8TE49 926 aaPredicted RBP22.24■■□□□ 1.15
PHGDH-226ENST00000641756 CHPF2Q9P2E5 772 aa22.24■■□□□ 1.15
PHGDH-226ENST00000641756 HMMRO75330 724 aa22.24■■□□□ 1.15
PHGDH-226ENST00000641756 TNS3Q68CZ2 1445 aa22.23■■□□□ 1.15
PHGDH-226ENST00000641756 GSPT1P15170 499 aaKnown RBP22.23■■□□□ 1.15
PHGDH-226ENST00000641756 CHRNA2Q15822 529 aa22.22■■□□□ 1.15
PHGDH-226ENST00000641756 HOXB7P09629 217 aa22.22■■□□□ 1.15
PHGDH-226ENST00000641756 TBC1D2Q9BYX2 928 aa22.22■■□□□ 1.15
PHGDH-226ENST00000641756 XIRP1Q702N8 1843 aaKnown RBP22.22■■□□□ 1.15
PHGDH-226ENST00000641756 ANXA1P04083 346 aa22.21■■□□□ 1.15
PHGDH-226ENST00000641756 GNAI3P08754 354 aa22.21■■□□□ 1.15
PHGDH-226ENST00000641756 TBC1D9Q6ZT07 1266 aa22.21■■□□□ 1.15
PHGDH-226ENST00000641756 CSB-PGBD3P0DP91 1061 aa22.21■■□□□ 1.15
PHGDH-226ENST00000641756 RAPGEF4Q8WZA2 1011 aa22.21■■□□□ 1.15
PHGDH-226ENST00000641756 PXDNLA1KZ92 1463 aa22.2■■□□□ 1.14
PHGDH-226ENST00000641756 N4BP2Q86UW6 1770 aaPredicted RBP22.2■■□□□ 1.14
PHGDH-226ENST00000641756 COL18A1P39060 1754 aa22.2■■□□□ 1.14
PHGDH-226ENST00000641756 TTC22Q5TAA0 569 aa22.19■■□□□ 1.14
PHGDH-226ENST00000641756 SPATA31A3Q5VYP0 1347 aa22.19■■□□□ 1.14
PHGDH-226ENST00000641756 OVOS2A0A0G2JMS6 1433 aa22.19■■□□□ 1.14
PHGDH-226ENST00000641756 LRRFIP2Q9Y608 721 aaKnown RBP22.19■■□□□ 1.14
PHGDH-226ENST00000641756 PNMA6EA0A0J9YXQ4 647 aa22.18■■□□□ 1.14
PHGDH-226ENST00000641756 USP44Q9H0E7 712 aa22.18■■□□□ 1.14
PHGDH-226ENST00000641756 EXOC6BQ9Y2D4 811 aa22.18■■□□□ 1.14
PHGDH-226ENST00000641756 NFKBIBQ15653 356 aa22.18■■□□□ 1.14
PHGDH-226ENST00000641756 PRAMEF22A3QJZ6 481 aa22.17■■□□□ 1.14
PHGDH-226ENST00000641756 BRINP3Q76B58 766 aa22.17■■□□□ 1.14
PHGDH-226ENST00000641756 SLKQ9H2G2 1235 aaPredicted RBP22.17■■□□□ 1.14
PHGDH-226ENST00000641756 CDC45O75419 566 aa22.16■■□□□ 1.14
PHGDH-226ENST00000641756 TATP17735 454 aaPredicted RBP22.16■■□□□ 1.14
PHGDH-226ENST00000641756 MEGF6O75095 1541 aa22.16■■□□□ 1.14
PHGDH-226ENST00000641756 LMTK3Q96Q04 1460 aa22.16■■□□□ 1.14
PHGDH-226ENST00000641756 SIPA1L3O60292 1781 aaPredicted RBP22.16■■□□□ 1.14
PHGDH-226ENST00000641756 STRCQ7RTU9 1775 aa22.16■■□□□ 1.14
PHGDH-226ENST00000641756 CRYBG1Q9Y4K1 1723 aa22.16■■□□□ 1.14
PHGDH-226ENST00000641756 GIGYF1O75420 1035 aaPredicted RBP22.16■■□□□ 1.14
PHGDH-226ENST00000641756 UBTFL1P0CB47 393 aaPredicted RBP22.16■■□□□ 1.14
PHGDH-226ENST00000641756 ATP8B2P98198 1209 aa22.16■■□□□ 1.14
PHGDH-226ENST00000641756 KDM4FA0A1W2PPD8 638 aa22.15■■□□□ 1.14
PHGDH-226ENST00000641756 PI4KAP2A4QPH2 592 aa22.15■■□□□ 1.14
PHGDH-226ENST00000641756 RBM25P49756 843 aaKnown RBP22.15■■□□□ 1.14
PHGDH-226ENST00000641756 PI4KAP1Q8N8J0 262 aa22.15■■□□□ 1.14
PHGDH-226ENST00000641756 SRCIN1Q9C0H9 1055 aa22.15■■□□□ 1.14
PHGDH-226ENST00000641756 USP35Q9P2H5 1018 aa22.15■■□□□ 1.14
PHGDH-226ENST00000641756 DNAAF4Q8WXU2 420 aa22.14■■□□□ 1.13
PHGDH-226ENST00000641756 CHMP4AQ9BY43 222 aa22.14■■□□□ 1.13
PHGDH-226ENST00000641756 ADAMTS7Q9UKP4 1686 aa22.14■■□□□ 1.13
PHGDH-226ENST00000641756 ZNF335Q9H4Z2 1342 aaPredicted RBP22.14■■□□□ 1.13
PHGDH-226ENST00000641756 PROSER3Q2NL68 480 aa22.13■■□□□ 1.13
PHGDH-226ENST00000641756 PHKG2P15735 406 aa22.13■■□□□ 1.13
PHGDH-226ENST00000641756 DEKP35659 375 aaKnown RBP22.13■■□□□ 1.13
PHGDH-226ENST00000641756 SPRYD3Q8NCJ5 442 aa22.13■■□□□ 1.13
PHGDH-226ENST00000641756 DBF4Q9UBU7 674 aaPredicted RBP22.13■■□□□ 1.13
PHGDH-226ENST00000641756 SPG7Q9UQ90 795 aa22.13■■□□□ 1.13
PHGDH-226ENST00000641756 HEG1Q9ULI3 1381 aa22.13■■□□□ 1.13
PHGDH-226ENST00000641756 KDM6AO15550 1401 aaPredicted RBP22.12■■□□□ 1.13
PHGDH-226ENST00000641756 SLC39A6Q13433 755 aa22.12■■□□□ 1.13
PHGDH-226ENST00000641756 BEND3Q5T5X7 828 aa22.12■■□□□ 1.13
PHGDH-226ENST00000641756 ADCY9O60503 1353 aa22.12■■□□□ 1.13
PHGDH-226ENST00000641756 SDSP20132 328 aa22.11■■□□□ 1.13
PHGDH-226ENST00000641756 NBPF7P0C2Y1 421 aaPredicted RBP22.1■■□□□ 1.13
PHGDH-226ENST00000641756 LRRCC1Q9C099 1032 aa22.1■■□□□ 1.13
PHGDH-226ENST00000641756 SLC52A2Q9HAB3 445 aa22.1■■□□□ 1.13
PHGDH-226ENST00000641756 SCN11AQ9UI33 1791 aa22.1■■□□□ 1.13
PHGDH-226ENST00000641756 NFATC2IPQ8NCF5 419 aa22.09■■□□□ 1.13
PHGDH-226ENST00000641756 CPDO75976 1380 aa22.09■■□□□ 1.13
PHGDH-226ENST00000641756 IFNL2Q8IZJ0 200 aa22.09■■□□□ 1.13
PHGDH-226ENST00000641756 IBTKQ9P2D0 1353 aaPredicted RBP22.08■■□□□ 1.13
PHGDH-226ENST00000641756 FRAT2O75474 233 aaPredicted RBP22.08■■□□□ 1.13
PHGDH-226ENST00000641756 PDE1AP54750 535 aa22.08■■□□□ 1.13
PHGDH-226ENST00000641756 TSHZ3Q63HK5 1081 aa22.08■■□□□ 1.13
PHGDH-226ENST00000641756 ZNF790Q6PG37 636 aa22.08■■□□□ 1.13
PHGDH-226ENST00000641756 ANTXR1Q9H6X2 564 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms