RNA–Protein interactions for RNA: ENST00000641418.1

CASC19-229, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,373 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-229ENST00000641418 NUDT18Q6ZVK8 323 aa15.12■□□□□ 0.01
CASC19-229ENST00000641418 KIAA1468Q9P260 1216 aa15.12■□□□□ 0.01
CASC19-229ENST00000641418 PNMA3Q9UL41 463 aa15.12■□□□□ 0.01
CASC19-229ENST00000641418 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.11■□□□□ 0.01
CASC19-229ENST00000641418 DMRTA1Q5VZB9 504 aa15.11■□□□□ 0.01
CASC19-229ENST00000641418 TK2O00142 265 aa15.11■□□□□ 0.01
CASC19-229ENST00000641418 KRT27Q7Z3Y8 459 aa15.11■□□□□ 0.01
CASC19-229ENST00000641418 EYA1Q99502 592 aa15.11■□□□□ 0.01
CASC19-229ENST00000641418 KDM4CQ9H3R0 1056 aa15.11■□□□□ 0.01
CASC19-229ENST00000641418 GLI3P10071 1580 aa15.1■□□□□ 0.01
CASC19-229ENST00000641418 MARF1Q9Y4F3 1742 aaKnown RBP15.1■□□□□ 0.01
CASC19-229ENST00000641418 PLEKHG3A1L390 1219 aa15.1■□□□□ 0.01
CASC19-229ENST00000641418 NBPF8Q3BBV2 869 aa15.1■□□□□ 0.01
CASC19-229ENST00000641418 GPCPD1Q9NPB8 672 aa15.1■□□□□ 0.01
CASC19-229ENST00000641418 RGPD8O14715 1765 aaPredicted RBP15.09■□□□□ 0.01
CASC19-229ENST00000641418 ACEP12821 1306 aa15.09■□□□□ 0.01
CASC19-229ENST00000641418 SF3B2Q13435 895 aaKnown RBP15.09■□□□□ 0.01
CASC19-229ENST00000641418 PARP9Q8IXQ6 854 aa15.09■□□□□ 0.01
CASC19-229ENST00000641418 GPBP1L1Q9HC44 474 aaPredicted RBP15.09■□□□□ 0.01
CASC19-229ENST00000641418 PRDM11Q9NQV5 511 aa15.09■□□□□ 0.01
CASC19-229ENST00000641418 VPS9D1Q9Y2B5 631 aa15.09■□□□□ 0.01
CASC19-229ENST00000641418 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.09■□□□□ 0.01
CASC19-229ENST00000641418 ATP7BP35670 1465 aa15.09■□□□□ 0.01
CASC19-229ENST00000641418 BLMP54132 1417 aaPredicted RBP15.08■□□□□ 0.01
CASC19-229ENST00000641418 A0A0G2JS52 829 aa15.08■□□□□ 0
CASC19-229ENST00000641418 MYT1Q01538 1121 aa15.08■□□□□ 0
CASC19-229ENST00000641418 FAM98CQ17RN3 349 aaKnown RBP15.08■□□□□ 0
CASC19-229ENST00000641418 PHOX2BQ99453 314 aa15.08■□□□□ 0
CASC19-229ENST00000641418 POLR3AO14802 1390 aaPredicted RBP15.07■□□□□ 0
CASC19-229ENST00000641418 SRPK2P78362 688 aaKnown RBP15.07■□□□□ 0
CASC19-229ENST00000641418 MDM2Q00987 491 aaPredicted RBP15.07■□□□□ 0
CASC19-229ENST00000641418 TMEM132AQ24JP5 1023 aa15.07■□□□□ 0
CASC19-229ENST00000641418 L3MBTL2Q969R5 705 aa15.07■□□□□ 0
CASC19-229ENST00000641418 CENPJQ9HC77 1338 aaPredicted RBP15.06■□□□□ 0
CASC19-229ENST00000641418 DNAJB2P25686 324 aa15.06■□□□□ 0
CASC19-229ENST00000641418 LSM11P83369 360 aaKnown RBP eCLIP15.06■□□□□ 0
CASC19-229ENST00000641418 NUTM2GQ5VZR2 741 aa15.06■□□□□ 0
CASC19-229ENST00000641418 NBPF3Q9H094 633 aa15.06■□□□□ 0
CASC19-229ENST00000641418 SPATA31A5Q5VU36 1347 aa15.05■□□□□ 0
CASC19-229ENST00000641418 SPATA31A7Q8IWB4 1347 aa15.05■□□□□ 0
CASC19-229ENST00000641418 TRPM3Q9HCF6 1732 aaPredicted RBP15.05■□□□□ -0
CASC19-229ENST00000641418 RCCD1A6NED2 376 aa15.05■□□□□ -0
CASC19-229ENST00000641418 DEFB132Q7Z7B7 95 aa15.05■□□□□ -0
CASC19-229ENST00000641418 ZC3H6P61129 1189 aaKnown RBP15.04■□□□□ -0
CASC19-229ENST00000641418 CHRNA2Q15822 529 aa15.04■□□□□ -0
CASC19-229ENST00000641418 GIGYF2Q6Y7W6 1299 aaKnown RBP15.04■□□□□ -0
CASC19-229ENST00000641418 ABTB2Q8N961 1025 aa15.04■□□□□ -0
CASC19-229ENST00000641418 SIN3AQ96ST3 1273 aa15.04■□□□□ -0
CASC19-229ENST00000641418 KIAA0232Q92628 1395 aa15.04■□□□□ -0
CASC19-229ENST00000641418 TMUB1Q9BVT8 246 aa15.03■□□□□ -0
CASC19-229ENST00000641418 ARHGEF28Q8N1W1 1705 aaKnown RBP15.02■□□□□ -0
CASC19-229ENST00000641418 NWD2Q9ULI1 1742 aa15.02■□□□□ -0
CASC19-229ENST00000641418 ALS2Q96Q42 1657 aa15.02■□□□□ -0
CASC19-229ENST00000641418 NEUROD1Q13562 356 aa15.01□□□□□ -0.01
CASC19-229ENST00000641418 LAPTM4BQ86VI4 370 aa15.01□□□□□ -0.01
CASC19-229ENST00000641418 NLRP13Q86W25 1043 aa15.01□□□□□ -0.01
CASC19-229ENST00000641418 DDRGK1Q96HY6 314 aa15.01□□□□□ -0.01
CASC19-229ENST00000641418 STRN4Q9NRL3 753 aa15.01□□□□□ -0.01
CASC19-229ENST00000641418 PLCH1Q4KWH8 1693 aa15.01□□□□□ -0.01
CASC19-229ENST00000641418 SMAPO00193 183 aa15□□□□□ -0.01
CASC19-229ENST00000641418 EVA1CP58658 441 aa15□□□□□ -0.01
CASC19-229ENST00000641418 ADGRD1Q6QNK2 874 aa15□□□□□ -0.01
CASC19-229ENST00000641418 CABP1Q9NZU7 370 aa15□□□□□ -0.01
CASC19-229ENST00000641418 ABCA3Q99758 1704 aa15□□□□□ -0.01
CASC19-229ENST00000641418 PPIP5K1Q6PFW1 1433 aa15□□□□□ -0.01
CASC19-229ENST00000641418 SPATA31A1Q5TZJ5 1347 aa15□□□□□ -0.01
CASC19-229ENST00000641418 KIAA1210Q9ULL0 1709 aa15□□□□□ -0.01
CASC19-229ENST00000641418 BAG6P46379 1132 aa14.99□□□□□ -0.01
CASC19-229ENST00000641418 COL14A1Q05707 1796 aaKnown RBP14.99□□□□□ -0.01
CASC19-229ENST00000641418 BRD4O60885 1362 aaPredicted RBP14.99□□□□□ -0.01
CASC19-229ENST00000641418 C3orf80F5H4A9 247 aa14.98□□□□□ -0.01
CASC19-229ENST00000641418 GCP02774 474 aa14.98□□□□□ -0.01
CASC19-229ENST00000641418 TMEM134Q9H6X4 195 aa14.98□□□□□ -0.01
CASC19-229ENST00000641418 USP19O94966 1318 aa14.98□□□□□ -0.01
CASC19-229ENST00000641418 EVC2Q86UK5 1308 aa14.98□□□□□ -0.01
CASC19-229ENST00000641418 BHMG1C9JSJ3 638 aaPredicted RBP14.98□□□□□ -0.01
CASC19-229ENST00000641418 SSTR3P32745 418 aaPredicted RBP14.98□□□□□ -0.01
CASC19-229ENST00000641418 SLC4A3P48751 1232 aa14.98□□□□□ -0.01
CASC19-229ENST00000641418 FAM182BQ5T319 152 aa14.98□□□□□ -0.01
CASC19-229ENST00000641418 SULF1Q8IWU6 871 aa14.98□□□□□ -0.01
CASC19-229ENST00000641418 CPDO75976 1380 aa14.97□□□□□ -0.01
CASC19-229ENST00000641418 ANKRD13DQ6ZTN6 518 aa14.97□□□□□ -0.01
CASC19-229ENST00000641418 MRPL50Q8N5N7 158 aaKnown RBP14.97□□□□□ -0.01
CASC19-229ENST00000641418 REPIN1Q9BWE0 567 aaKnown RBP14.97□□□□□ -0.01
CASC19-229ENST00000641418 USP35Q9P2H5 1018 aa14.97□□□□□ -0.01
CASC19-229ENST00000641418 LARP1Q6PKG0 1096 aaKnown RBP14.96□□□□□ -0.02
CASC19-229ENST00000641418 NLRP7Q8WX94 980 aa14.96□□□□□ -0.02
CASC19-229ENST00000641418 FAM217BQ9NTX9 383 aaPredicted RBP14.96□□□□□ -0.02
CASC19-229ENST00000641418 SEPT9Q9UHD8 586 aaPredicted RBP14.96□□□□□ -0.02
CASC19-229ENST00000641418 NRAPQ86VF7 1730 aa14.95□□□□□ -0.02
CASC19-229ENST00000641418 ROCK2O75116 1388 aaKnown RBP14.95□□□□□ -0.02
CASC19-229ENST00000641418 ITSN1Q15811 1721 aa14.95□□□□□ -0.02
CASC19-229ENST00000641418 FAM196AQ6ZSG2 479 aa14.95□□□□□ -0.02
CASC19-229ENST00000641418 SSH2Q76I76 1423 aa14.94□□□□□ -0.02
CASC19-229ENST00000641418 TCP11L2Q8N4U5 519 aa14.94□□□□□ -0.02
CASC19-229ENST00000641418 IL27Q8NEV9 243 aa14.94□□□□□ -0.02
CASC19-229ENST00000641418 PDE3BQ13370 1112 aa14.93□□□□□ -0.02
CASC19-229ENST00000641418 THRAP3Q9Y2W1 955 aaKnown RBP14.93□□□□□ -0.02
CASC19-229ENST00000641418 EP400Q96L91 3159 aa14.93□□□□□ -0.02
CASC19-229ENST00000641418 USP6P35125 1406 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 181.6 ms