RNA–Protein interactions for RNA: ENST00000641339.1

RGPD1-205, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

Gene RGPD1, Length 562 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-205ENST00000641339 ZBTB7AO95365 584 aa22.07■■□□□ 1.12
RGPD1-205ENST00000641339 ITPK1Q13572 414 aa22.07■■□□□ 1.12
RGPD1-205ENST00000641339 SLC52A2Q9HAB3 445 aa22.07■■□□□ 1.12
RGPD1-205ENST00000641339 TFCP2L1Q9NZI6 479 aa22.07■■□□□ 1.12
RGPD1-205ENST00000641339 MYBBP1AQ9BQG0 1328 aaKnown RBP22.06■■□□□ 1.12
RGPD1-205ENST00000641339 IL17REQ8NFR9 667 aa22.06■■□□□ 1.12
RGPD1-205ENST00000641339 PRKRIP1Q9H875 184 aaPredicted RBP22.06■■□□□ 1.12
RGPD1-205ENST00000641339 LINC00116Q8NCU8 138 aa22.05■■□□□ 1.12
RGPD1-205ENST00000641339 GNAT3A8MTJ3 354 aa22.04■■□□□ 1.12
RGPD1-205ENST00000641339 ATP6V1AP38606 617 aa22.04■■□□□ 1.12
RGPD1-205ENST00000641339 ATF5Q9Y2D1 282 aaPredicted RBP22.04■■□□□ 1.12
RGPD1-205ENST00000641339 ADAMTS7Q9UKP4 1686 aa22.04■■□□□ 1.12
RGPD1-205ENST00000641339 MAP3K5Q99683 1374 aa22.03■■□□□ 1.12
RGPD1-205ENST00000641339 SCN11AQ9UI33 1791 aa22.03■■□□□ 1.12
RGPD1-205ENST00000641339 HMGB2P26583 209 aaKnown RBP22.03■■□□□ 1.12
RGPD1-205ENST00000641339 PTGER2P43116 358 aa22.03■■□□□ 1.12
RGPD1-205ENST00000641339 AMIGO3Q86WK7 504 aa22.03■■□□□ 1.12
RGPD1-205ENST00000641339 PLEKHF1Q96S99 279 aa22.03■■□□□ 1.12
RGPD1-205ENST00000641339 MRC1P22897 1456 aa22.03■■□□□ 1.12
RGPD1-205ENST00000641339 RBM42Q9BTD8 480 aaKnown RBP22.02■■□□□ 1.12
RGPD1-205ENST00000641339 COL23A1Q86Y22 540 aaPredicted RBP22.01■■□□□ 1.11
RGPD1-205ENST00000641339 SGIP1Q9BQI5 828 aa22.01■■□□□ 1.11
RGPD1-205ENST00000641339 MTFR1LQ9H019 292 aa22.01■■□□□ 1.11
RGPD1-205ENST00000641339 C5P01031 1676 aa22.01■■□□□ 1.11
RGPD1-205ENST00000641339 PTCD1O75127 700 aaKnown RBP22■■□□□ 1.11
RGPD1-205ENST00000641339 TAF1LQ8IZX4 1826 aa21.99■■□□□ 1.11
RGPD1-205ENST00000641339 SLC39A6Q13433 755 aa21.99■■□□□ 1.11
RGPD1-205ENST00000641339 SMIM5Q71RC9 77 aa21.99■■□□□ 1.11
RGPD1-205ENST00000641339 SLC16A10Q8TF71 515 aa21.99■■□□□ 1.11
RGPD1-205ENST00000641339 CEMIPQ8WUJ3 1361 aa21.99■■□□□ 1.11
RGPD1-205ENST00000641339 C4BP0C0L5 1744 aa21.98■■□□□ 1.11
RGPD1-205ENST00000641339 QSER1Q2KHR3 1735 aa21.98■■□□□ 1.11
RGPD1-205ENST00000641339 TUBGCP6Q96RT7 1819 aa21.97■■□□□ 1.11
RGPD1-205ENST00000641339 AK7Q96M32 723 aa21.97■■□□□ 1.11
RGPD1-205ENST00000641339 ZNF831Q5JPB2 1677 aa21.95■■□□□ 1.1
RGPD1-205ENST00000641339 HTATSF1O43719 755 aaKnown RBP21.94■■□□□ 1.1
RGPD1-205ENST00000641339 TEFQ10587 303 aa21.94■■□□□ 1.1
RGPD1-205ENST00000641339 RC3H1Q5TC82 1133 aaKnown RBP21.94■■□□□ 1.1
RGPD1-205ENST00000641339 MCM10Q7L590 875 aa21.94■■□□□ 1.1
RGPD1-205ENST00000641339 FLAD1Q8NFF5 587 aa21.94■■□□□ 1.1
RGPD1-205ENST00000641339 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.93■■□□□ 1.1
RGPD1-205ENST00000641339 MSH5O43196 834 aa21.93■■□□□ 1.1
RGPD1-205ENST00000641339 SSFA2P28290 1259 aa21.93■■□□□ 1.1
RGPD1-205ENST00000641339 DCTN1Q14203 1278 aa21.93■■□□□ 1.1
RGPD1-205ENST00000641339 PNNQ9H307 717 aaKnown RBP21.93■■□□□ 1.1
RGPD1-205ENST00000641339 KCPQ6ZWJ8 1503 aa21.92■■□□□ 1.1
RGPD1-205ENST00000641339 CNTNAP4Q9C0A0 1308 aa21.92■■□□□ 1.1
RGPD1-205ENST00000641339 GNPATO15228 680 aa21.92■■□□□ 1.1
RGPD1-205ENST00000641339 PHF14O94880 888 aa21.91■■□□□ 1.1
RGPD1-205ENST00000641339 NFE2L2Q16236 605 aa21.91■■□□□ 1.1
RGPD1-205ENST00000641339 ZNF790Q6PG37 636 aa21.91■■□□□ 1.1
RGPD1-205ENST00000641339 RTF1Q92541 710 aaKnown RBP21.91■■□□□ 1.1
RGPD1-205ENST00000641339 VIRMAQ69YN4 1812 aaKnown RBP21.9■■□□□ 1.1
RGPD1-205ENST00000641339 DNAJC10Q8IXB1 793 aa21.9■■□□□ 1.1
RGPD1-205ENST00000641339 KCNQ3O43525 872 aa21.89■■□□□ 1.09
RGPD1-205ENST00000641339 RPS6KA4O75676 772 aa21.89■■□□□ 1.09
RGPD1-205ENST00000641339 NEFMP07197 916 aa21.89■■□□□ 1.09
RGPD1-205ENST00000641339 YY1P25490 414 aa21.89■■□□□ 1.09
RGPD1-205ENST00000641339 CRKLP46109 303 aaKnown RBP21.89■■□□□ 1.09
RGPD1-205ENST00000641339 INTS5Q6P9B9 1019 aaKnown RBP21.89■■□□□ 1.09
RGPD1-205ENST00000641339 VSIG10Q8N0Z9 540 aa21.89■■□□□ 1.09
RGPD1-205ENST00000641339 ADAMTS8Q9UP79 889 aa21.89■■□□□ 1.09
RGPD1-205ENST00000641339 UBR3Q6ZT12 1888 aa21.89■■□□□ 1.09
RGPD1-205ENST00000641339 BTBD11A6QL63 1104 aa21.88■■□□□ 1.09
RGPD1-205ENST00000641339 ZNF496Q96IT1 587 aaPredicted RBP21.88■■□□□ 1.09
RGPD1-205ENST00000641339 ARXQ96QS3 562 aa21.88■■□□□ 1.09
RGPD1-205ENST00000641339 FHDC1Q9C0D6 1143 aaPredicted RBP21.88■■□□□ 1.09
RGPD1-205ENST00000641339 RTCBQ9Y3I0 505 aaKnown RBP21.88■■□□□ 1.09
RGPD1-205ENST00000641339 COL5A3P25940 1745 aaPredicted RBP21.88■■□□□ 1.09
RGPD1-205ENST00000641339 SIPA1L3O60292 1781 aaPredicted RBP21.87■■□□□ 1.09
RGPD1-205ENST00000641339 COL24A1Q17RW2 1714 aa21.87■■□□□ 1.09
RGPD1-205ENST00000641339 DCAF8L1A6NGE4 600 aa21.87■■□□□ 1.09
RGPD1-205ENST00000641339 CYP19A1P11511 503 aaPredicted RBP21.87■■□□□ 1.09
RGPD1-205ENST00000641339 MSL1Q68DK7 614 aa21.87■■□□□ 1.09
RGPD1-205ENST00000641339 TTC5Q8N0Z6 440 aa21.87■■□□□ 1.09
RGPD1-205ENST00000641339 CICQ96RK0 1608 aaPredicted RBP21.87■■□□□ 1.09
RGPD1-205ENST00000641339 TJP1Q07157 1748 aa21.86■■□□□ 1.09
RGPD1-205ENST00000641339 MAPK8IP3Q9UPT6 1336 aa21.86■■□□□ 1.09
RGPD1-205ENST00000641339 CCDC184Q52MB2 194 aa21.86■■□□□ 1.09
RGPD1-205ENST00000641339 TRAPPC3LQ5T215 181 aa21.86■■□□□ 1.09
RGPD1-205ENST00000641339 ARHGEF1Q92888 912 aaKnown RBP21.86■■□□□ 1.09
RGPD1-205ENST00000641339 WDR43Q15061 677 aaKnown RBP eCLIP21.85■■□□□ 1.09
RGPD1-205ENST00000641339 CCDC146Q8IYE0 955 aa21.85■■□□□ 1.09
RGPD1-205ENST00000641339 POLD1P28340 1107 aa21.84■■□□□ 1.09
RGPD1-205ENST00000641339 TMPOP42166 694 aaKnown RBP21.84■■□□□ 1.09
RGPD1-205ENST00000641339 TAF7Q15545 349 aaPredicted RBP21.84■■□□□ 1.09
RGPD1-205ENST00000641339 SYT17Q9BSW7 474 aa21.84■■□□□ 1.09
RGPD1-205ENST00000641339 HEG1Q9ULI3 1381 aa21.84■■□□□ 1.09
RGPD1-205ENST00000641339 UBR2Q8IWV8 1755 aa21.84■■□□□ 1.09
RGPD1-205ENST00000641339 MYH14Q7Z406 1995 aaKnown RBP21.83■■□□□ 1.09
RGPD1-205ENST00000641339 ADRA2BP18089 450 aa21.83■■□□□ 1.09
RGPD1-205ENST00000641339 RUNDC1Q96C34 613 aa21.83■■□□□ 1.09
RGPD1-205ENST00000641339 THUMPD2Q9BTF0 503 aaKnown RBP21.83■■□□□ 1.09
RGPD1-205ENST00000641339 CCDC87Q9NVE4 849 aa21.83■■□□□ 1.09
RGPD1-205ENST00000641339 RIPK4P57078 832 aa21.82■■□□□ 1.08
RGPD1-205ENST00000641339 FMNL2Q96PY5 1086 aa21.82■■□□□ 1.08
RGPD1-205ENST00000641339 MIS18AQ9NYP9 233 aa21.82■■□□□ 1.08
RGPD1-205ENST00000641339 KLHL34Q8N239 644 aa21.8■■□□□ 1.08
RGPD1-205ENST00000641339 ZBTB1Q9Y2K1 713 aa21.8■■□□□ 1.08
RGPD1-205ENST00000641339 ANP32CO43423 234 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms