RNA–Protein interactions for RNA: ENST00000640916.1

SCARB2-226, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 689 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-226ENST00000640916 C9orf131Q5VYM1 1079 aa11.71□□□□□ -0.53
SCARB2-226ENST00000640916 RRAGCQ9HB90 399 aa11.71□□□□□ -0.53
SCARB2-226ENST00000640916 FBLN1P23142 703 aa11.7□□□□□ -0.54
SCARB2-226ENST00000640916 SSFA2P28290 1259 aa11.7□□□□□ -0.54
SCARB2-226ENST00000640916 HOXC9P31274 260 aa11.7□□□□□ -0.54
SCARB2-226ENST00000640916 C16orf71Q8IYS4 520 aaPredicted RBP11.7□□□□□ -0.54
SCARB2-226ENST00000640916 LINC00116Q8NCU8 138 aa11.7□□□□□ -0.54
SCARB2-226ENST00000640916 AK7Q96M32 723 aa11.7□□□□□ -0.54
SCARB2-226ENST00000640916 MMP10P09238 476 aa11.69□□□□□ -0.54
SCARB2-226ENST00000640916 DPEP1P16444 411 aa11.69□□□□□ -0.54
SCARB2-226ENST00000640916 NBPF6Q5VWK0 638 aa11.69□□□□□ -0.54
SCARB2-226ENST00000640916 NBPF4Q96M43 638 aa11.69□□□□□ -0.54
SCARB2-226ENST00000640916 NSD3Q9BZ95 1437 aa11.69□□□□□ -0.54
SCARB2-226ENST00000640916 PLEKHG2Q9H7P9 1386 aa11.68□□□□□ -0.54
SCARB2-226ENST00000640916 MAP3K19Q56UN5 1328 aa11.68□□□□□ -0.54
SCARB2-226ENST00000640916 PITPNM1O00562 1244 aa11.68□□□□□ -0.54
SCARB2-226ENST00000640916 MPRIPQ6WCQ1 1025 aa11.68□□□□□ -0.54
SCARB2-226ENST00000640916 EDC4Q6P2E9 1401 aaKnown RBP11.68□□□□□ -0.54
SCARB2-226ENST00000640916 C4AP0C0L4 1744 aa11.67□□□□□ -0.54
SCARB2-226ENST00000640916 SLC24A1O60721 1099 aa11.67□□□□□ -0.54
SCARB2-226ENST00000640916 HMGB2P26583 209 aaKnown RBP11.67□□□□□ -0.54
SCARB2-226ENST00000640916 USHBP1Q8N6Y0 703 aa11.67□□□□□ -0.54
SCARB2-226ENST00000640916 SMC1BQ8NDV3 1235 aa11.67□□□□□ -0.54
SCARB2-226ENST00000640916 SPDYE1Q8NFV5 336 aaPredicted RBP11.67□□□□□ -0.54
SCARB2-226ENST00000640916 SLC12A5Q9H2X9 1139 aa11.67□□□□□ -0.54
SCARB2-226ENST00000640916 KDM2BQ8NHM5 1336 aa11.66□□□□□ -0.54
SCARB2-226ENST00000640916 CYP27B1O15528 508 aa11.66□□□□□ -0.54
SCARB2-226ENST00000640916 FCHSD2O94868 740 aa11.66□□□□□ -0.54
SCARB2-226ENST00000640916 ITPK1Q13572 414 aa11.66□□□□□ -0.54
SCARB2-226ENST00000640916 PIGBQ92521 554 aa11.66□□□□□ -0.54
SCARB2-226ENST00000640916 PCDH10Q9P2E7 1040 aa11.66□□□□□ -0.54
SCARB2-226ENST00000640916 CGNL1Q0VF96 1302 aa11.65□□□□□ -0.54
SCARB2-226ENST00000640916 SMARCC1Q92922 1105 aaPredicted RBP11.65□□□□□ -0.54
SCARB2-226ENST00000640916 DCAF5Q96JK2 942 aa11.65□□□□□ -0.54
SCARB2-226ENST00000640916 LOC102724428A0A0B4J2F2 783 aa11.64□□□□□ -0.55
SCARB2-226ENST00000640916 SIK1P57059 783 aa11.64□□□□□ -0.55
SCARB2-226ENST00000640916 A0A1W2PP64 1363 aa11.64□□□□□ -0.55
SCARB2-226ENST00000640916 CCDC88AQ3V6T2 1871 aa11.63□□□□□ -0.55
SCARB2-226ENST00000640916 GNPATO15228 680 aa11.63□□□□□ -0.55
SCARB2-226ENST00000640916 RNF181Q9P0P0 153 aa11.63□□□□□ -0.55
SCARB2-226ENST00000640916 PCDH11XQ9BZA7 1347 aa11.62□□□□□ -0.55
SCARB2-226ENST00000640916 PCDH11YQ9BZA8 1340 aa11.62□□□□□ -0.55
SCARB2-226ENST00000640916 KDM6AO15550 1401 aaPredicted RBP11.62□□□□□ -0.55
SCARB2-226ENST00000640916 MYH14Q7Z406 1995 aaKnown RBP11.62□□□□□ -0.55
SCARB2-226ENST00000640916 FOXN1O15353 648 aa11.62□□□□□ -0.55
SCARB2-226ENST00000640916 AMPHP49418 695 aa11.62□□□□□ -0.55
SCARB2-226ENST00000640916 COL5A3P25940 1745 aaPredicted RBP11.61□□□□□ -0.55
SCARB2-226ENST00000640916 POTECB2RU33 542 aa11.61□□□□□ -0.55
SCARB2-226ENST00000640916 TMF1P82094 1093 aa11.61□□□□□ -0.55
SCARB2-226ENST00000640916 NKX1-1Q15270 411 aaPredicted RBP11.61□□□□□ -0.55
SCARB2-226ENST00000640916 HDGFL2Q7Z4V5 671 aaPredicted RBP11.61□□□□□ -0.55
SCARB2-226ENST00000640916 RAPGEF4Q8WZA2 1011 aa11.61□□□□□ -0.55
SCARB2-226ENST00000640916 L3MBTL2Q969R5 705 aa11.61□□□□□ -0.55
SCARB2-226ENST00000640916 FBXO3Q9UK99 471 aa11.61□□□□□ -0.55
SCARB2-226ENST00000640916 ASAP1Q9ULH1 1129 aa11.61□□□□□ -0.55
SCARB2-226ENST00000640916 RTL1A6NKG5 1358 aa11.6□□□□□ -0.55
SCARB2-226ENST00000640916 GYS1P13807 737 aa11.6□□□□□ -0.55
SCARB2-226ENST00000640916 TATP17735 454 aaPredicted RBP11.6□□□□□ -0.55
SCARB2-226ENST00000640916 FAM161AQ3B820 660 aa11.6□□□□□ -0.55
SCARB2-226ENST00000640916 NLGN1Q8N2Q7 840 aa11.6□□□□□ -0.55
SCARB2-226ENST00000640916 TMC1Q8TDI8 760 aa11.6□□□□□ -0.55
SCARB2-226ENST00000640916 PRDM10Q9NQV6 1147 aa11.6□□□□□ -0.55
SCARB2-226ENST00000640916 PIM2Q9P1W9 311 aa11.6□□□□□ -0.55
SCARB2-226ENST00000640916 ZNF831Q5JPB2 1677 aa11.59□□□□□ -0.55
SCARB2-226ENST00000640916 VIRMAQ69YN4 1812 aaKnown RBP11.59□□□□□ -0.55
SCARB2-226ENST00000640916 RRS1Q15050 365 aaKnown RBP11.59□□□□□ -0.55
SCARB2-226ENST00000640916 ARHGEF1Q92888 912 aaKnown RBP11.59□□□□□ -0.55
SCARB2-226ENST00000640916 SLC4A9Q96Q91 983 aa11.59□□□□□ -0.55
SCARB2-226ENST00000640916 CCDC87Q9NVE4 849 aa11.59□□□□□ -0.55
SCARB2-226ENST00000640916 TIAM2Q8IVF5 1701 aa11.58□□□□□ -0.56
SCARB2-226ENST00000640916 ROCK2O75116 1388 aaKnown RBP11.58□□□□□ -0.56
SCARB2-226ENST00000640916 KDRP35968 1356 aa11.58□□□□□ -0.56
SCARB2-226ENST00000640916 GLTPD2A6NH11 291 aa11.58□□□□□ -0.56
SCARB2-226ENST00000640916 VEGFAP15692 232 aaPredicted RBP11.58□□□□□ -0.56
SCARB2-226ENST00000640916 ATP6V1AP38606 617 aa11.58□□□□□ -0.56
SCARB2-226ENST00000640916 DALRD3Q5D0E6 543 aaKnown RBP11.58□□□□□ -0.56
SCARB2-226ENST00000640916 TRAPPC3LQ5T215 181 aa11.58□□□□□ -0.56
SCARB2-226ENST00000640916 ATG3Q9NT62 314 aa11.58□□□□□ -0.56
SCARB2-226ENST00000640916 CHRNA5P30532 468 aa11.57□□□□□ -0.56
SCARB2-226ENST00000640916 RASSF7Q02833 373 aa11.57□□□□□ -0.56
SCARB2-226ENST00000640916 COG3Q96JB2 828 aa11.57□□□□□ -0.56
SCARB2-226ENST00000640916 TERF2IPQ9NYB0 399 aa11.57□□□□□ -0.56
SCARB2-226ENST00000640916 NCAPD2Q15021 1401 aa11.57□□□□□ -0.56
SCARB2-226ENST00000640916 ZC3H4Q9UPT8 1303 aaKnown RBP11.57□□□□□ -0.56
SCARB2-226ENST00000640916 DDR1Q08345 913 aa11.56□□□□□ -0.56
SCARB2-226ENST00000640916 HSP90AB2PQ58FF8 381 aa11.56□□□□□ -0.56
SCARB2-226ENST00000640916 MKRN1Q9UHC7 482 aaKnown RBP11.56□□□□□ -0.56
SCARB2-226ENST00000640916 RTCBQ9Y3I0 505 aaKnown RBP11.56□□□□□ -0.56
SCARB2-226ENST00000640916 PARP3Q9Y6F1 533 aa11.56□□□□□ -0.56
SCARB2-226ENST00000640916 ADAMTS7Q9UKP4 1686 aa11.55□□□□□ -0.56
SCARB2-226ENST00000640916 CREBZFQ9NS37 354 aa11.55□□□□□ -0.56
SCARB2-226ENST00000640916 INSRP06213 1382 aa11.54□□□□□ -0.56
SCARB2-226ENST00000640916 DICER1Q9UPY3 1922 aaKnown RBP11.54□□□□□ -0.56
SCARB2-226ENST00000640916 DLEC1Q9Y238 1755 aa11.54□□□□□ -0.56
SCARB2-226ENST00000640916 RC3H1Q5TC82 1133 aaKnown RBP11.54□□□□□ -0.56
SCARB2-226ENST00000640916 ABHD8Q96I13 439 aa11.54□□□□□ -0.56
SCARB2-226ENST00000640916 CNTNAP1P78357 1384 aa11.54□□□□□ -0.56
SCARB2-226ENST00000640916 AFDNP55196 1824 aaKnown RBP11.53□□□□□ -0.56
SCARB2-226ENST00000640916 RPS6KA4O75676 772 aa11.53□□□□□ -0.56
SCARB2-226ENST00000640916 RGS19P49795 217 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms