RNA–Protein interactions for RNA: ENST00000640481.1

NECAP1-226, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,216 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-226ENST00000640481 VIRMAQ69YN4 1812 aaKnown RBP8.47□□□□□ -1.05
NECAP1-226ENST00000640481 PHRF1Q9P1Y6 1649 aaKnown RBP8.47□□□□□ -1.05
NECAP1-226ENST00000640481 NCOA3Q9Y6Q9 1424 aa8.46□□□□□ -1.05
NECAP1-226ENST00000640481 BTBD11A6QL63 1104 aa8.46□□□□□ -1.05
NECAP1-226ENST00000640481 NLRP2Q9NX02 1062 aa8.46□□□□□ -1.05
NECAP1-226ENST00000640481 DCCP43146 1447 aa8.46□□□□□ -1.05
NECAP1-226ENST00000640481 KDM4FA0A1W2PPD8 638 aa8.46□□□□□ -1.06
NECAP1-226ENST00000640481 RNMTO43148 476 aaKnown RBP8.46□□□□□ -1.06
NECAP1-226ENST00000640481 KLHL34Q8N239 644 aa8.46□□□□□ -1.06
NECAP1-226ENST00000640481 SOS1Q07889 1333 aaPredicted RBP8.46□□□□□ -1.06
NECAP1-226ENST00000640481 CHRNA2Q15822 529 aa8.46□□□□□ -1.06
NECAP1-226ENST00000640481 PHAXQ9H814 394 aaKnown RBP8.46□□□□□ -1.06
NECAP1-226ENST00000640481 ATP10DQ9P241 1426 aa8.45□□□□□ -1.06
NECAP1-226ENST00000640481 MFAP1P55081 439 aaKnown RBP8.45□□□□□ -1.06
NECAP1-226ENST00000640481 TBC1D32Q96NH3 1257 aa8.45□□□□□ -1.06
NECAP1-226ENST00000640481 MED1Q15648 1581 aaPredicted RBP8.45□□□□□ -1.06
NECAP1-226ENST00000640481 APBB1O00213 710 aa8.45□□□□□ -1.06
NECAP1-226ENST00000640481 NCAPD2Q15021 1401 aa8.45□□□□□ -1.06
NECAP1-226ENST00000640481 CSB-PGBD3P0DP91 1061 aa8.44□□□□□ -1.06
NECAP1-226ENST00000640481 BMP2KLQ5H9B9 411 aa8.44□□□□□ -1.06
NECAP1-226ENST00000640481 C16orf71Q8IYS4 520 aaPredicted RBP8.44□□□□□ -1.06
NECAP1-226ENST00000640481 RAPGEF4Q8WZA2 1011 aa8.44□□□□□ -1.06
NECAP1-226ENST00000640481 PXDNQ92626 1479 aa8.44□□□□□ -1.06
NECAP1-226ENST00000640481 ALS2Q96Q42 1657 aa8.44□□□□□ -1.06
NECAP1-226ENST00000640481 RGPD5Q99666 1765 aa8.44□□□□□ -1.06
NECAP1-226ENST00000640481 SPATA31A3Q5VYP0 1347 aa8.44□□□□□ -1.06
NECAP1-226ENST00000640481 GNAI2P04899 355 aa8.44□□□□□ -1.06
NECAP1-226ENST00000640481 BRINP3Q76B58 766 aa8.44□□□□□ -1.06
NECAP1-226ENST00000640481 CHPF2Q9P2E5 772 aa8.44□□□□□ -1.06
NECAP1-226ENST00000640481 ANXA1P04083 346 aa8.43□□□□□ -1.06
NECAP1-226ENST00000640481 C22orf23Q9BZE7 217 aa8.43□□□□□ -1.06
NECAP1-226ENST00000640481 ZNF335Q9H4Z2 1342 aaPredicted RBP8.43□□□□□ -1.06
NECAP1-226ENST00000640481 TNS3Q68CZ2 1445 aa8.43□□□□□ -1.06
NECAP1-226ENST00000640481 SMARCA5O60264 1052 aaPredicted RBP8.43□□□□□ -1.06
NECAP1-226ENST00000640481 PLEKHM2Q8IWE5 1019 aa8.43□□□□□ -1.06
NECAP1-226ENST00000640481 HMMRO75330 724 aa8.42□□□□□ -1.06
NECAP1-226ENST00000640481 GNAI3P08754 354 aa8.42□□□□□ -1.06
NECAP1-226ENST00000640481 HOXB7P09629 217 aa8.42□□□□□ -1.06
NECAP1-226ENST00000640481 TATP17735 454 aaPredicted RBP8.42□□□□□ -1.06
NECAP1-226ENST00000640481 OTUD7AQ8TE49 926 aaPredicted RBP8.42□□□□□ -1.06
NECAP1-226ENST00000640481 USP44Q9H0E7 712 aa8.42□□□□□ -1.06
NECAP1-226ENST00000640481 SLAIN2Q9P270 581 aa8.42□□□□□ -1.06
NECAP1-226ENST00000640481 CACNA1FO60840 1977 aa8.42□□□□□ -1.06
NECAP1-226ENST00000640481 LMO7Q8WWI1 1683 aa8.42□□□□□ -1.06
NECAP1-226ENST00000640481 LMTK3Q96Q04 1460 aa8.42□□□□□ -1.06
NECAP1-226ENST00000640481 PRAMEF22A3QJZ6 481 aa8.42□□□□□ -1.06
NECAP1-226ENST00000640481 GIGYF1O75420 1035 aaPredicted RBP8.42□□□□□ -1.06
NECAP1-226ENST00000640481 CHMP4AQ9BY43 222 aa8.42□□□□□ -1.06
NECAP1-226ENST00000640481 FAM208AQ9UK61 1670 aaKnown RBP8.41□□□□□ -1.06
NECAP1-226ENST00000640481 PI4KAP2A4QPH2 592 aa8.41□□□□□ -1.06
NECAP1-226ENST00000640481 BECN1Q14457 450 aa8.41□□□□□ -1.06
NECAP1-226ENST00000640481 PI4KAP1Q8N8J0 262 aa8.41□□□□□ -1.06
NECAP1-226ENST00000640481 GSPT1P15170 499 aaKnown RBP8.41□□□□□ -1.06
NECAP1-226ENST00000640481 SLC39A6Q13433 755 aa8.41□□□□□ -1.06
NECAP1-226ENST00000640481 SRCIN1Q9C0H9 1055 aa8.41□□□□□ -1.06
NECAP1-226ENST00000640481 EXOC6BQ9Y2D4 811 aa8.41□□□□□ -1.06
NECAP1-226ENST00000640481 LRRFIP2Q9Y608 721 aaKnown RBP8.41□□□□□ -1.06
NECAP1-226ENST00000640481 PNMA6EA0A0J9YXQ4 647 aa8.41□□□□□ -1.06
NECAP1-226ENST00000640481 PHKG2P15735 406 aa8.41□□□□□ -1.06
NECAP1-226ENST00000640481 KCNA4P22459 653 aa8.41□□□□□ -1.06
NECAP1-226ENST00000640481 ATP8B2P98198 1209 aa8.41□□□□□ -1.06
NECAP1-226ENST00000640481 TBC1D9Q6ZT07 1266 aa8.41□□□□□ -1.06
NECAP1-226ENST00000640481 NFATC2IPQ8NCF5 419 aa8.41□□□□□ -1.06
NECAP1-226ENST00000640481 SPG7Q9UQ90 795 aa8.41□□□□□ -1.06
NECAP1-226ENST00000640481 DNAAF4Q8WXU2 420 aa8.4□□□□□ -1.06
NECAP1-226ENST00000640481 DBF4Q9UBU7 674 aaPredicted RBP8.4□□□□□ -1.06
NECAP1-226ENST00000640481 KDM3BQ7LBC6 1761 aa8.4□□□□□ -1.07
NECAP1-226ENST00000640481 STRCQ7RTU9 1775 aa8.4□□□□□ -1.07
NECAP1-226ENST00000640481 TULP1O00294 542 aaPredicted RBP8.4□□□□□ -1.07
NECAP1-226ENST00000640481 UBTFL1P0CB47 393 aaPredicted RBP8.4□□□□□ -1.07
NECAP1-226ENST00000640481 PROSER3Q2NL68 480 aa8.4□□□□□ -1.07
NECAP1-226ENST00000640481 RTL5Q5HYW3 569 aaPredicted RBP8.4□□□□□ -1.07
NECAP1-226ENST00000640481 IFNL2Q8IZJ0 200 aa8.4□□□□□ -1.07
NECAP1-226ENST00000640481 XIRP1Q702N8 1843 aaKnown RBP8.4□□□□□ -1.07
NECAP1-226ENST00000640481 CAMTA1Q9Y6Y1 1673 aa8.4□□□□□ -1.07
NECAP1-226ENST00000640481 TTC22Q5TAA0 569 aa8.39□□□□□ -1.07
NECAP1-226ENST00000640481 TBC1D2Q9BYX2 928 aa8.39□□□□□ -1.07
NECAP1-226ENST00000640481 SLC52A2Q9HAB3 445 aa8.39□□□□□ -1.07
NECAP1-226ENST00000640481 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.39□□□□□ -1.07
NECAP1-226ENST00000640481 HEG1Q9ULI3 1381 aa8.39□□□□□ -1.07
NECAP1-226ENST00000640481 OVOS2A0A0G2JMS6 1433 aa8.39□□□□□ -1.07
NECAP1-226ENST00000640481 CYP27B1O15528 508 aa8.39□□□□□ -1.07
NECAP1-226ENST00000640481 BEND3Q5T5X7 828 aa8.39□□□□□ -1.07
NECAP1-226ENST00000640481 ZNF790Q6PG37 636 aa8.39□□□□□ -1.07
NECAP1-226ENST00000640481 PRDM11Q9NQV5 511 aa8.39□□□□□ -1.07
NECAP1-226ENST00000640481 MEGF6O75095 1541 aa8.39□□□□□ -1.07
NECAP1-226ENST00000640481 COL18A1P39060 1754 aa8.39□□□□□ -1.07
NECAP1-226ENST00000640481 NBPF7P0C2Y1 421 aaPredicted RBP8.39□□□□□ -1.07
NECAP1-226ENST00000640481 SOS2Q07890 1332 aaPredicted RBP8.38□□□□□ -1.07
NECAP1-226ENST00000640481 CPDO75976 1380 aa8.38□□□□□ -1.07
NECAP1-226ENST00000640481 CDC45O75419 566 aa8.38□□□□□ -1.07
NECAP1-226ENST00000640481 KDM6AO15550 1401 aaPredicted RBP8.38□□□□□ -1.07
NECAP1-226ENST00000640481 RBM25P49756 843 aaKnown RBP8.38□□□□□ -1.07
NECAP1-226ENST00000640481 SLKQ9H2G2 1235 aaPredicted RBP8.38□□□□□ -1.07
NECAP1-226ENST00000640481 ADCY9O60503 1353 aa8.38□□□□□ -1.07
NECAP1-226ENST00000640481 DCAF5Q96JK2 942 aa8.37□□□□□ -1.07
NECAP1-226ENST00000640481 LRRCC1Q9C099 1032 aa8.37□□□□□ -1.07
NECAP1-226ENST00000640481 MAP3K2Q9Y2U5 619 aa8.37□□□□□ -1.07
NECAP1-226ENST00000640481 PXDNLA1KZ92 1463 aa8.37□□□□□ -1.07
NECAP1-226ENST00000640481 SDSP20132 328 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms