RNA–Protein interactions for RNA: ENST00000639811.1

NECAP1-219, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5 BASIC

Gene NECAP1, Length 2,175 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-219ENST00000639811 COL18A1P39060 1754 aa12.34□□□□□ -0.43
NECAP1-219ENST00000639811 ANKRD44Q8N8A2 993 aa12.33□□□□□ -0.44
NECAP1-219ENST00000639811 RNMTO43148 476 aaKnown RBP12.33□□□□□ -0.44
NECAP1-219ENST00000639811 EIF4A1P60842 406 aaKnown RBP12.33□□□□□ -0.44
NECAP1-219ENST00000639811 CEP85Q6P2H3 762 aa12.33□□□□□ -0.44
NECAP1-219ENST00000639811 SLC4A10Q6U841 1118 aa12.33□□□□□ -0.44
NECAP1-219ENST00000639811 CRYBG1Q9Y4K1 1723 aa12.33□□□□□ -0.44
NECAP1-219ENST00000639811 SPATA31A3Q5VYP0 1347 aa12.33□□□□□ -0.44
NECAP1-219ENST00000639811 SLC4A3P48751 1232 aa12.32□□□□□ -0.44
NECAP1-219ENST00000639811 CCT4P50991 539 aaKnown RBP12.32□□□□□ -0.44
NECAP1-219ENST00000639811 DCTPP1Q9H773 170 aa12.32□□□□□ -0.44
NECAP1-219ENST00000639811 TEFQ10587 303 aa12.32□□□□□ -0.44
NECAP1-219ENST00000639811 C1orf141Q5JVX7 400 aa12.32□□□□□ -0.44
NECAP1-219ENST00000639811 HDGFL1Q5TGJ6 251 aa12.32□□□□□ -0.44
NECAP1-219ENST00000639811 BRINP3Q76B58 766 aa12.32□□□□□ -0.44
NECAP1-219ENST00000639811 RPAP2Q8IXW5 612 aaPredicted RBP12.32□□□□□ -0.44
NECAP1-219ENST00000639811 CACNA1FO60840 1977 aa12.31□□□□□ -0.44
NECAP1-219ENST00000639811 FKBP5Q13451 457 aaPredicted RBP12.31□□□□□ -0.44
NECAP1-219ENST00000639811 ZNF335Q9H4Z2 1342 aaPredicted RBP12.31□□□□□ -0.44
NECAP1-219ENST00000639811 OVOS2A0A0G2JMS6 1433 aa12.3□□□□□ -0.44
NECAP1-219ENST00000639811 BTBD11A6QL63 1104 aa12.3□□□□□ -0.44
NECAP1-219ENST00000639811 CHRNA2Q15822 529 aa12.3□□□□□ -0.44
NECAP1-219ENST00000639811 TBC1D32Q96NH3 1257 aa12.3□□□□□ -0.44
NECAP1-219ENST00000639811 PHAXQ9H814 394 aaKnown RBP12.3□□□□□ -0.44
NECAP1-219ENST00000639811 NLRP2Q9NX02 1062 aa12.3□□□□□ -0.44
NECAP1-219ENST00000639811 ADAMTS7Q9UKP4 1686 aa12.3□□□□□ -0.44
NECAP1-219ENST00000639811 SIPA1L3O60292 1781 aaPredicted RBP12.29□□□□□ -0.44
NECAP1-219ENST00000639811 HOXB7P09629 217 aa12.29□□□□□ -0.44
NECAP1-219ENST00000639811 EIF2S2P20042 333 aaKnown RBP12.29□□□□□ -0.44
NECAP1-219ENST00000639811 N4BP2Q86UW6 1770 aaPredicted RBP12.28□□□□□ -0.44
NECAP1-219ENST00000639811 MEGF6O75095 1541 aa12.28□□□□□ -0.44
NECAP1-219ENST00000639811 BMP2KLQ5H9B9 411 aa12.28□□□□□ -0.44
NECAP1-219ENST00000639811 UPF2Q9HAU5 1272 aaKnown RBP12.28□□□□□ -0.44
NECAP1-219ENST00000639811 CHPF2Q9P2E5 772 aa12.28□□□□□ -0.44
NECAP1-219ENST00000639811 CPDO75976 1380 aa12.27□□□□□ -0.44
NECAP1-219ENST00000639811 PXDNLA1KZ92 1463 aa12.27□□□□□ -0.44
NECAP1-219ENST00000639811 ABCC6O95255 1503 aa12.27□□□□□ -0.44
NECAP1-219ENST00000639811 RAPGEF4Q8WZA2 1011 aa12.27□□□□□ -0.45
NECAP1-219ENST00000639811 HEG1Q9ULI3 1381 aa12.27□□□□□ -0.45
NECAP1-219ENST00000639811 GNAI2P04899 355 aa12.26□□□□□ -0.45
NECAP1-219ENST00000639811 MFAP1P55081 439 aaKnown RBP12.26□□□□□ -0.45
NECAP1-219ENST00000639811 NBR1Q14596 966 aa12.26□□□□□ -0.45
NECAP1-219ENST00000639811 PLEKHM2Q8IWE5 1019 aa12.26□□□□□ -0.45
NECAP1-219ENST00000639811 C16orf71Q8IYS4 520 aaPredicted RBP12.26□□□□□ -0.45
NECAP1-219ENST00000639811 SLAIN2Q9P270 581 aa12.26□□□□□ -0.45
NECAP1-219ENST00000639811 KDM6AO15550 1401 aaPredicted RBP12.26□□□□□ -0.45
NECAP1-219ENST00000639811 CSB-PGBD3P0DP91 1061 aa12.26□□□□□ -0.45
NECAP1-219ENST00000639811 TATP17735 454 aaPredicted RBP12.26□□□□□ -0.45
NECAP1-219ENST00000639811 SOS2Q07890 1332 aaPredicted RBP12.25□□□□□ -0.45
NECAP1-219ENST00000639811 ANXA1P04083 346 aa12.25□□□□□ -0.45
NECAP1-219ENST00000639811 PRAMEF22A3QJZ6 481 aa12.25□□□□□ -0.45
NECAP1-219ENST00000639811 SMARCA5O60264 1052 aaPredicted RBP12.25□□□□□ -0.45
NECAP1-219ENST00000639811 GIGYF1O75420 1035 aaPredicted RBP12.25□□□□□ -0.45
NECAP1-219ENST00000639811 GNAI3P08754 354 aa12.25□□□□□ -0.45
NECAP1-219ENST00000639811 PHKG2P15735 406 aa12.25□□□□□ -0.45
NECAP1-219ENST00000639811 OTUD7AQ8TE49 926 aaPredicted RBP12.25□□□□□ -0.45
NECAP1-219ENST00000639811 USP44Q9H0E7 712 aa12.25□□□□□ -0.45
NECAP1-219ENST00000639811 DAXXQ9UER7 740 aaPredicted RBP12.25□□□□□ -0.45
NECAP1-219ENST00000639811 SCN11AQ9UI33 1791 aa12.24□□□□□ -0.45
NECAP1-219ENST00000639811 HMMRO75330 724 aa12.24□□□□□ -0.45
NECAP1-219ENST00000639811 GSPT1P15170 499 aaKnown RBP12.24□□□□□ -0.45
NECAP1-219ENST00000639811 C22orf23Q9BZE7 217 aa12.24□□□□□ -0.45
NECAP1-219ENST00000639811 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.24□□□□□ -0.45
NECAP1-219ENST00000639811 APBB1O00213 710 aa12.23□□□□□ -0.45
NECAP1-219ENST00000639811 SPG7Q9UQ90 795 aa12.23□□□□□ -0.45
NECAP1-219ENST00000639811 PNMA6EA0A0J9YXQ4 647 aa12.23□□□□□ -0.45
NECAP1-219ENST00000639811 MYT1Q01538 1121 aa12.23□□□□□ -0.45
NECAP1-219ENST00000639811 BCL11AQ9H165 835 aa12.23□□□□□ -0.45
NECAP1-219ENST00000639811 LRRFIP2Q9Y608 721 aaKnown RBP12.23□□□□□ -0.45
NECAP1-219ENST00000639811 ADCY9O60503 1353 aa12.23□□□□□ -0.45
NECAP1-219ENST00000639811 PKD1L3Q7Z443 1732 aa12.22□□□□□ -0.45
NECAP1-219ENST00000639811 PI4KAP2A4QPH2 592 aa12.22□□□□□ -0.45
NECAP1-219ENST00000639811 CYP27B1O15528 508 aa12.22□□□□□ -0.45
NECAP1-219ENST00000639811 ATP8B2P98198 1209 aa12.22□□□□□ -0.45
NECAP1-219ENST00000639811 PROSER3Q2NL68 480 aa12.22□□□□□ -0.45
NECAP1-219ENST00000639811 PI4KAP1Q8N8J0 262 aa12.22□□□□□ -0.45
NECAP1-219ENST00000639811 CHMP4AQ9BY43 222 aa12.22□□□□□ -0.45
NECAP1-219ENST00000639811 SLC52A2Q9HAB3 445 aa12.22□□□□□ -0.45
NECAP1-219ENST00000639811 SLC39A6Q13433 755 aa12.22□□□□□ -0.45
NECAP1-219ENST00000639811 BEND3Q5T5X7 828 aa12.22□□□□□ -0.45
NECAP1-219ENST00000639811 TTC22Q5TAA0 569 aa12.22□□□□□ -0.45
NECAP1-219ENST00000639811 TBC1D9Q6ZT07 1266 aa12.22□□□□□ -0.45
NECAP1-219ENST00000639811 IFNL2Q8IZJ0 200 aa12.22□□□□□ -0.45
NECAP1-219ENST00000639811 DNAAF4Q8WXU2 420 aa12.22□□□□□ -0.45
NECAP1-219ENST00000639811 SRCIN1Q9C0H9 1055 aa12.22□□□□□ -0.45
NECAP1-219ENST00000639811 DBF4Q9UBU7 674 aaPredicted RBP12.22□□□□□ -0.45
NECAP1-219ENST00000639811 NFATC2IPQ8NCF5 419 aa12.21□□□□□ -0.45
NECAP1-219ENST00000639811 EXOC6BQ9Y2D4 811 aa12.21□□□□□ -0.45
NECAP1-219ENST00000639811 PLEKHG2Q9H7P9 1386 aa12.21□□□□□ -0.46
NECAP1-219ENST00000639811 ABCA3Q99758 1704 aa12.21□□□□□ -0.46
NECAP1-219ENST00000639811 UBTFL1P0CB47 393 aaPredicted RBP12.2□□□□□ -0.46
NECAP1-219ENST00000639811 ZNF790Q6PG37 636 aa12.2□□□□□ -0.46
NECAP1-219ENST00000639811 PRDM11Q9NQV5 511 aa12.2□□□□□ -0.46
NECAP1-219ENST00000639811 C5P01031 1676 aa12.2□□□□□ -0.46
NECAP1-219ENST00000639811 MRC1P22897 1456 aa12.2□□□□□ -0.46
NECAP1-219ENST00000639811 BECN1Q14457 450 aa12.19□□□□□ -0.46
NECAP1-219ENST00000639811 PDIA6Q15084 440 aa12.19□□□□□ -0.46
NECAP1-219ENST00000639811 TBC1D2Q9BYX2 928 aa12.19□□□□□ -0.46
NECAP1-219ENST00000639811 WDR17Q8IZU2 1322 aa12.19□□□□□ -0.46
NECAP1-219ENST00000639811 CDC45O75419 566 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms