RNA–Protein interactions for RNA: ENST00000638883.1

NECAP1-213, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,940 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-213ENST00000638883 TSPY10P0CW01 314 aa8.74□□□□□ -1.01
NECAP1-213ENST00000638883 HS1BP3Q53T59 392 aa8.74□□□□□ -1.01
NECAP1-213ENST00000638883 CC2D1BQ5T0F9 858 aaKnown RBP8.74□□□□□ -1.01
NECAP1-213ENST00000638883 RGS22Q8NE09 1264 aa8.74□□□□□ -1.01
NECAP1-213ENST00000638883 ZNF500O60304 480 aaPredicted RBP8.73□□□□□ -1.01
NECAP1-213ENST00000638883 MCM5P33992 734 aa8.73□□□□□ -1.01
NECAP1-213ENST00000638883 RBM26Q5T8P6 1007 aaKnown RBP8.73□□□□□ -1.01
NECAP1-213ENST00000638883 CNPY4Q8N129 248 aa8.73□□□□□ -1.01
NECAP1-213ENST00000638883 TSPYL1Q9H0U9 437 aa8.73□□□□□ -1.01
NECAP1-213ENST00000638883 PANK3Q9H999 370 aa8.73□□□□□ -1.01
NECAP1-213ENST00000638883 SLIT3O75094 1523 aa8.73□□□□□ -1.01
NECAP1-213ENST00000638883 KIF3CO14782 793 aa8.73□□□□□ -1.01
NECAP1-213ENST00000638883 RNF214Q8ND24 703 aa8.73□□□□□ -1.01
NECAP1-213ENST00000638883 TNPO1Q92973 898 aaKnown RBP8.73□□□□□ -1.01
NECAP1-213ENST00000638883 ATP7BP35670 1465 aa8.73□□□□□ -1.01
NECAP1-213ENST00000638883 NUP188Q5SRE5 1749 aa8.73□□□□□ -1.01
NECAP1-213ENST00000638883 PRIM1P49642 420 aaKnown RBP8.72□□□□□ -1.01
NECAP1-213ENST00000638883 MYRIPQ8NFW9 859 aa8.72□□□□□ -1.01
NECAP1-213ENST00000638883 PRIMPOLQ96LW4 560 aa8.72□□□□□ -1.01
NECAP1-213ENST00000638883 DIAPH3Q9NSV4 1193 aa8.72□□□□□ -1.01
NECAP1-213ENST00000638883 ROBO1Q9Y6N7 1651 aa8.72□□□□□ -1.01
NECAP1-213ENST00000638883 U2AF2P26368 475 aaKnown RBP eCLIP8.72□□□□□ -1.013e-6■■■■□ 23.7
NECAP1-213ENST00000638883 RALBP1Q15311 655 aa8.72□□□□□ -1.01
NECAP1-213ENST00000638883 MYBBP1AQ9BQG0 1328 aaKnown RBP8.72□□□□□ -1.01
NECAP1-213ENST00000638883 PER1O15534 1290 aaPredicted RBP8.72□□□□□ -1.01
NECAP1-213ENST00000638883 ATP2B3Q16720 1220 aa8.72□□□□□ -1.01
NECAP1-213ENST00000638883 SCN11AQ9UI33 1791 aa8.72□□□□□ -1.01
NECAP1-213ENST00000638883 LRPPRCP42704 1394 aaKnown RBP8.71□□□□□ -1.01
NECAP1-213ENST00000638883 CDK12Q9NYV4 1490 aaPredicted RBP8.71□□□□□ -1.01
NECAP1-213ENST00000638883 TBC1D32Q96NH3 1257 aa8.71□□□□□ -1.01
NECAP1-213ENST00000638883 KDM2BQ8NHM5 1336 aa8.71□□□□□ -1.01
NECAP1-213ENST00000638883 ROCK2O75116 1388 aaKnown RBP8.71□□□□□ -1.01
NECAP1-213ENST00000638883 FAM193AP78312 1265 aa8.71□□□□□ -1.02
NECAP1-213ENST00000638883 BCCIPQ9P287 314 aaKnown RBP eCLIP8.71□□□□□ -1.02
NECAP1-213ENST00000638883 INSRP06213 1382 aa8.71□□□□□ -1.02
NECAP1-213ENST00000638883 NLRP13Q86W25 1043 aa8.71□□□□□ -1.02
NECAP1-213ENST00000638883 DISP3Q9P2K9 1392 aa8.7□□□□□ -1.02
NECAP1-213ENST00000638883 SETD1BQ9UPS6 1966 aaKnown RBP8.7□□□□□ -1.02
NECAP1-213ENST00000638883 GOLGA6L6A8MZA4 724 aa8.7□□□□□ -1.02
NECAP1-213ENST00000638883 TRIM66O15016 1216 aa8.7□□□□□ -1.02
NECAP1-213ENST00000638883 MCTP1Q6DN14 999 aa8.7□□□□□ -1.02
NECAP1-213ENST00000638883 CHMP4CQ96CF2 233 aa8.7□□□□□ -1.02
NECAP1-213ENST00000638883 PTCH1Q13635 1447 aa8.69□□□□□ -1.02
NECAP1-213ENST00000638883 BLMP54132 1417 aaPredicted RBP8.69□□□□□ -1.02
NECAP1-213ENST00000638883 JARID2Q92833 1246 aaPredicted RBP8.69□□□□□ -1.02
NECAP1-213ENST00000638883 GTF2A1P52655 376 aaPredicted RBP8.68□□□□□ -1.02
NECAP1-213ENST00000638883 GPATCH11Q8N954 259 aa8.68□□□□□ -1.02
NECAP1-213ENST00000638883 KDM4CQ9H3R0 1056 aa8.68□□□□□ -1.02
NECAP1-213ENST00000638883 CPSF1Q10570 1443 aaKnown RBP8.68□□□□□ -1.02
NECAP1-213ENST00000638883 FEZ1Q99689 392 aa8.68□□□□□ -1.02
NECAP1-213ENST00000638883 CLEC11AQ9Y240 323 aa8.68□□□□□ -1.02
NECAP1-213ENST00000638883 GOLGA2Q08379 1002 aa8.67□□□□□ -1.02
NECAP1-213ENST00000638883 PMFBP1Q8TBY8 1022 aa8.67□□□□□ -1.02
NECAP1-213ENST00000638883 OGFRQ9NZT2 677 aa8.67□□□□□ -1.02
NECAP1-213ENST00000638883 SBF2Q86WG5 1849 aa8.67□□□□□ -1.02
NECAP1-213ENST00000638883 LAMB4A4D0S4 1761 aa8.67□□□□□ -1.02
NECAP1-213ENST00000638883 AXDND1Q5T1B0 1012 aaPredicted RBP8.67□□□□□ -1.02
NECAP1-213ENST00000638883 TMUB1Q9BVT8 246 aa8.67□□□□□ -1.02
NECAP1-213ENST00000638883 COG6Q9Y2V7 657 aa8.67□□□□□ -1.02
NECAP1-213ENST00000638883 GABPB1Q06547 395 aaPredicted RBP8.67□□□□□ -1.02
NECAP1-213ENST00000638883 OXER1Q8TDS5 423 aa8.67□□□□□ -1.02
NECAP1-213ENST00000638883 BRD4O60885 1362 aaPredicted RBP8.67□□□□□ -1.02
NECAP1-213ENST00000638883 COL5A3P25940 1745 aaPredicted RBP8.67□□□□□ -1.02
NECAP1-213ENST00000638883 USP19O94966 1318 aa8.66□□□□□ -1.02
NECAP1-213ENST00000638883 LMOD3Q0VAK6 560 aa8.66□□□□□ -1.02
NECAP1-213ENST00000638883 BCL2L12Q9HB09 334 aa8.66□□□□□ -1.02
NECAP1-213ENST00000638883 PARD3Q8TEW0 1356 aa8.66□□□□□ -1.02
NECAP1-213ENST00000638883 PDIA6Q15084 440 aa8.66□□□□□ -1.02
NECAP1-213ENST00000638883 KLHL40Q2TBA0 621 aa8.66□□□□□ -1.02
NECAP1-213ENST00000638883 NEUROD2Q15784 382 aa8.66□□□□□ -1.02
NECAP1-213ENST00000638883 RBM42Q9BTD8 480 aaKnown RBP8.66□□□□□ -1.02
NECAP1-213ENST00000638883 TMX1Q9H3N1 280 aa8.66□□□□□ -1.02
NECAP1-213ENST00000638883 CGNL1Q0VF96 1302 aa8.66□□□□□ -1.02
NECAP1-213ENST00000638883 MKRN3Q13064 507 aaKnown RBP8.65□□□□□ -1.02
NECAP1-213ENST00000638883 NOLC1Q14978 699 aaKnown RBP eCLIP8.65□□□□□ -1.02
NECAP1-213ENST00000638883 TMEM121BQ9BXQ6 578 aaPredicted RBP8.65□□□□□ -1.02
NECAP1-213ENST00000638883 RWDD1Q9H446 243 aaPredicted RBP8.65□□□□□ -1.02
NECAP1-213ENST00000638883 IGHDP01880 384 aa8.65□□□□□ -1.02
NECAP1-213ENST00000638883 RBM25P49756 843 aaKnown RBP8.65□□□□□ -1.02
NECAP1-213ENST00000638883 GOLGA6L1Q8N7Z2 621 aa8.65□□□□□ -1.02
NECAP1-213ENST00000638883 CLUAP1Q96AJ1 413 aa8.65□□□□□ -1.03
NECAP1-213ENST00000638883 BANK1Q8NDB2 785 aa8.64□□□□□ -1.03
NECAP1-213ENST00000638883 RBSNQ9H1K0 784 aa8.64□□□□□ -1.03
NECAP1-213ENST00000638883 ZNF622Q969S3 477 aaKnown RBP eCLIP8.64□□□□□ -1.03
NECAP1-213ENST00000638883 TSPYL2Q9H2G4 693 aaPredicted RBP8.64□□□□□ -1.03
NECAP1-213ENST00000638883 TOMM22Q9NS69 142 aa8.64□□□□□ -1.03
NECAP1-213ENST00000638883 TJP1Q07157 1748 aa8.64□□□□□ -1.03
NECAP1-213ENST00000638883 PRPF40AO75400 957 aaKnown RBP8.64□□□□□ -1.03
NECAP1-213ENST00000638883 A0A0G2JS52 829 aa8.63□□□□□ -1.03
NECAP1-213ENST00000638883 SSFA2P28290 1259 aa8.63□□□□□ -1.03
NECAP1-213ENST00000638883 ZSCAN23Q3MJ62 389 aa8.63□□□□□ -1.03
NECAP1-213ENST00000638883 RSPH14Q9UHP6 348 aa8.63□□□□□ -1.03
NECAP1-213ENST00000638883 YTHDC2Q9H6S0 1430 aaKnown RBP8.63□□□□□ -1.03
NECAP1-213ENST00000638883 AFAP1Q8N556 730 aa8.63□□□□□ -1.03
NECAP1-213ENST00000638883 FAM117AQ9C073 453 aa8.63□□□□□ -1.03
NECAP1-213ENST00000638883 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.63□□□□□ -1.03
NECAP1-213ENST00000638883 LOC102724159A0A0B4J2E5 919 aa8.63□□□□□ -1.03
NECAP1-213ENST00000638883 SYCE3A1L190 88 aa8.63□□□□□ -1.03
NECAP1-213ENST00000638883 TNNT1P13805 278 aa8.63□□□□□ -1.03
NECAP1-213ENST00000638883 NLRP6P59044 892 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms