RNA–Protein interactions for RNA: ENST00000638163.1

LINC00598-216, long intergenic non-protein coding RNA 598, humanhuman

TSL 4 BASIC

Gene LINC00598, Length 528 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00598-216ENST00000638163 DCTN1Q14203 1278 aa13.24□□□□□ -0.29
LINC00598-216ENST00000638163 ARHGAP45Q92619 1136 aa13.24□□□□□ -0.29
LINC00598-216ENST00000638163 QTRT2Q9H974 415 aaKnown RBP13.24□□□□□ -0.29
LINC00598-216ENST00000638163 SLC52A2Q9HAB3 445 aa13.24□□□□□ -0.29
LINC00598-216ENST00000638163 USP21Q9UK80 565 aa13.24□□□□□ -0.29
LINC00598-216ENST00000638163 WNK3Q9BYP7 1800 aa13.23□□□□□ -0.29
LINC00598-216ENST00000638163 BTBD11A6QL63 1104 aa13.23□□□□□ -0.29
LINC00598-216ENST00000638163 SMC4Q9NTJ3 1288 aa13.23□□□□□ -0.29
LINC00598-216ENST00000638163 BCL9LQ86UU0 1499 aa13.23□□□□□ -0.29
LINC00598-216ENST00000638163 KDM6AO15550 1401 aaPredicted RBP13.22□□□□□ -0.29
LINC00598-216ENST00000638163 SCN11AQ9UI33 1791 aa13.22□□□□□ -0.29
LINC00598-216ENST00000638163 CYP27B1O15528 508 aa13.22□□□□□ -0.29
LINC00598-216ENST00000638163 VAMP4O75379 141 aa13.22□□□□□ -0.29
LINC00598-216ENST00000638163 MPRIPQ6WCQ1 1025 aa13.22□□□□□ -0.29
LINC00598-216ENST00000638163 RXRBP28702 533 aa13.21□□□□□ -0.29
LINC00598-216ENST00000638163 CABP4P57796 275 aa13.21□□□□□ -0.29
LINC00598-216ENST00000638163 FKBP8Q14318 412 aa13.21□□□□□ -0.29
LINC00598-216ENST00000638163 DDB1Q16531 1140 aa13.21□□□□□ -0.29
LINC00598-216ENST00000638163 CCDC30Q5VVM6 783 aa13.21□□□□□ -0.29
LINC00598-216ENST00000638163 ZKSCAN2Q63HK3 967 aa13.21□□□□□ -0.29
LINC00598-216ENST00000638163 TTC5Q8N0Z6 440 aa13.21□□□□□ -0.29
LINC00598-216ENST00000638163 STK31Q9BXU1 1019 aa13.21□□□□□ -0.29
LINC00598-216ENST00000638163 KDM3BQ7LBC6 1761 aa13.21□□□□□ -0.29
LINC00598-216ENST00000638163 PTPRCP08575 1304 aa13.2□□□□□ -0.3
LINC00598-216ENST00000638163 TRPC5Q9UL62 973 aaPredicted RBP13.2□□□□□ -0.3
LINC00598-216ENST00000638163 CCDC9Q9Y3X0 531 aaKnown RBP13.2□□□□□ -0.3
LINC00598-216ENST00000638163 SIPA1L3O60292 1781 aaPredicted RBP13.2□□□□□ -0.3
LINC00598-216ENST00000638163 RBM6P78332 1123 aaKnown RBP13.19□□□□□ -0.3
LINC00598-216ENST00000638163 API5Q9BZZ5 524 aaKnown RBP13.19□□□□□ -0.3
LINC00598-216ENST00000638163 LGR6Q9HBX8 967 aa13.19□□□□□ -0.3
LINC00598-216ENST00000638163 USP35Q9P2H5 1018 aa13.19□□□□□ -0.3
LINC00598-216ENST00000638163 HMGB2P26583 209 aaKnown RBP13.18□□□□□ -0.3
LINC00598-216ENST00000638163 EIF4A1P60842 406 aaKnown RBP13.18□□□□□ -0.3
LINC00598-216ENST00000638163 ZNF790Q6PG37 636 aa13.18□□□□□ -0.3
LINC00598-216ENST00000638163 FTSJ3Q8IY81 847 aaKnown RBP13.18□□□□□ -0.3
LINC00598-216ENST00000638163 C8orf58Q8NAV2 365 aa13.18□□□□□ -0.3
LINC00598-216ENST00000638163 SSH1Q8WYL5 1049 aa13.18□□□□□ -0.3
LINC00598-216ENST00000638163 PPP4R2Q9NY27 417 aa13.18□□□□□ -0.3
LINC00598-216ENST00000638163 HEG1Q9ULI3 1381 aa13.18□□□□□ -0.3
LINC00598-216ENST00000638163 ERBB4Q15303 1308 aa13.17□□□□□ -0.3
LINC00598-216ENST00000638163 SHANK3Q9BYB0 1731 aa13.17□□□□□ -0.3
LINC00598-216ENST00000638163 BCL9O00512 1426 aa13.17□□□□□ -0.3
LINC00598-216ENST00000638163 ATRNO75882 1429 aa13.17□□□□□ -0.3
LINC00598-216ENST00000638163 SOCS7O14512 581 aa13.17□□□□□ -0.3
LINC00598-216ENST00000638163 ATF7IPQ6VMQ6 1270 aa13.17□□□□□ -0.3
LINC00598-216ENST00000638163 PELP1Q8IZL8 1130 aaKnown RBP13.17□□□□□ -0.3
LINC00598-216ENST00000638163 FMNL2Q96PY5 1086 aa13.17□□□□□ -0.3
LINC00598-216ENST00000638163 TMOD3Q9NYL9 352 aa13.17□□□□□ -0.3
LINC00598-216ENST00000638163 BCAR3O75815 825 aa13.16□□□□□ -0.3
LINC00598-216ENST00000638163 DDX54Q8TDD1 881 aaKnown RBP13.16□□□□□ -0.3
LINC00598-216ENST00000638163 TEX13AQ9BXU3 409 aaPredicted RBP13.16□□□□□ -0.3
LINC00598-216ENST00000638163 SNRPA1P09661 255 aaKnown RBP13.15□□□□□ -0.3
LINC00598-216ENST00000638163 HDGFL1Q5TGJ6 251 aa13.15□□□□□ -0.3
LINC00598-216ENST00000638163 DZIP1LQ8IYY4 767 aaKnown RBP13.15□□□□□ -0.3
LINC00598-216ENST00000638163 VSIG10Q8N0Z9 540 aa13.15□□□□□ -0.3
LINC00598-216ENST00000638163 MRPL50Q8N5N7 158 aaKnown RBP13.15□□□□□ -0.3
LINC00598-216ENST00000638163 NFATC2IPQ8NCF5 419 aa13.15□□□□□ -0.3
LINC00598-216ENST00000638163 GJD4Q96KN9 370 aaPredicted RBP13.15□□□□□ -0.3
LINC00598-216ENST00000638163 VIRMAQ69YN4 1812 aaKnown RBP13.14□□□□□ -0.31
LINC00598-216ENST00000638163 ONECUT3O60422 494 aaPredicted RBP13.14□□□□□ -0.31
LINC00598-216ENST00000638163 TSPYL6Q8N831 410 aa13.14□□□□□ -0.31
LINC00598-216ENST00000638163 FRAT1Q92837 279 aaPredicted RBP13.14□□□□□ -0.31
LINC00598-216ENST00000638163 DBF4Q9UBU7 674 aaPredicted RBP13.14□□□□□ -0.31
LINC00598-216ENST00000638163 DDX19BQ9UMR2 479 aa13.14□□□□□ -0.31
LINC00598-216ENST00000638163 THSD7AQ9UPZ6 1657 aa13.14□□□□□ -0.31
LINC00598-216ENST00000638163 CACNA1FO60840 1977 aa13.14□□□□□ -0.31
LINC00598-216ENST00000638163 GIGYF1O75420 1035 aaPredicted RBP13.13□□□□□ -0.31
LINC00598-216ENST00000638163 PAPPAQ13219 1627 aa13.13□□□□□ -0.31
LINC00598-216ENST00000638163 PXDNLA1KZ92 1463 aa13.12□□□□□ -0.31
LINC00598-216ENST00000638163 HYPKQ9NX55 129 aa13.12□□□□□ -0.31
LINC00598-216ENST00000638163 MIS18AQ9NYP9 233 aa13.12□□□□□ -0.31
LINC00598-216ENST00000638163 NOB1Q9ULX3 412 aaKnown RBP13.12□□□□□ -0.31
LINC00598-216ENST00000638163 IBTKQ9P2D0 1353 aaPredicted RBP13.11□□□□□ -0.31
LINC00598-216ENST00000638163 ELL2O00472 640 aaPredicted RBP13.11□□□□□ -0.31
LINC00598-216ENST00000638163 TRIM27P14373 513 aa13.11□□□□□ -0.31
LINC00598-216ENST00000638163 MVPQ14764 893 aaKnown RBP13.11□□□□□ -0.31
LINC00598-216ENST00000638163 SMARCC1Q92922 1105 aaPredicted RBP13.11□□□□□ -0.31
LINC00598-216ENST00000638163 ABCC4O15439 1325 aa13.11□□□□□ -0.31
LINC00598-216ENST00000638163 DDX58O95786 925 aaKnown RBP13.1□□□□□ -0.31
LINC00598-216ENST00000638163 SLC4A2P04920 1241 aa13.1□□□□□ -0.31
LINC00598-216ENST00000638163 FAM98CQ17RN3 349 aaKnown RBP13.1□□□□□ -0.31
LINC00598-216ENST00000638163 BCL2L13Q9BXK5 485 aa13.1□□□□□ -0.31
LINC00598-216ENST00000638163 UBR2Q8IWV8 1755 aa13.09□□□□□ -0.31
LINC00598-216ENST00000638163 PLIN1O60240 522 aa13.09□□□□□ -0.31
LINC00598-216ENST00000638163 CCT4P50991 539 aaKnown RBP13.09□□□□□ -0.31
LINC00598-216ENST00000638163 DDX21Q9NR30 783 aaKnown RBP eCLIP13.09□□□□□ -0.31
LINC00598-216ENST00000638163 HDAC5Q9UQL6 1122 aa13.09□□□□□ -0.31
LINC00598-216ENST00000638163 GLI3P10071 1580 aa13.08□□□□□ -0.32
LINC00598-216ENST00000638163 RGS12O14924 1447 aa13.08□□□□□ -0.32
LINC00598-216ENST00000638163 LAMB4A4D0S4 1761 aa13.08□□□□□ -0.32
LINC00598-216ENST00000638163 FLIIQ13045 1269 aa13.08□□□□□ -0.32
LINC00598-216ENST00000638163 ZNF496Q96IT1 587 aaPredicted RBP13.08□□□□□ -0.32
LINC00598-216ENST00000638163 CCDC136Q96JN2 1154 aa13.08□□□□□ -0.32
LINC00598-216ENST00000638163 KCPQ6ZWJ8 1503 aa13.08□□□□□ -0.32
LINC00598-216ENST00000638163 TOGARAM1Q9Y4F4 1720 aa13.08□□□□□ -0.32
LINC00598-216ENST00000638163 CICQ96RK0 1608 aaPredicted RBP13.07□□□□□ -0.32
LINC00598-216ENST00000638163 A0A0G2JS52 829 aa13.07□□□□□ -0.32
LINC00598-216ENST00000638163 STARD3NLO95772 234 aa13.07□□□□□ -0.32
LINC00598-216ENST00000638163 MYT1Q01538 1121 aa13.07□□□□□ -0.32
LINC00598-216ENST00000638163 KRT24Q2M2I5 525 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms