RNA–Protein interactions for RNA: ENST00000638073.1

KCNQ2-247, Transcript of potassium voltage-gated channel subfamily Q member 2, humanhuman

TSL 5

Gene KCNQ2, Length 164 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ2-247ENST00000638073 PIGBQ92521 554 aa16.66■□□□□ 0.26
KCNQ2-247ENST00000638073 SLC52A2Q9HAB3 445 aa16.66■□□□□ 0.26
KCNQ2-247ENST00000638073 LAMB4A4D0S4 1761 aa16.66■□□□□ 0.26
KCNQ2-247ENST00000638073 PLSCR1O15162 318 aa16.65■□□□□ 0.26
KCNQ2-247ENST00000638073 TMOD3Q9NYL9 352 aa16.65■□□□□ 0.26
KCNQ2-247ENST00000638073 BAG6P46379 1132 aa16.64■□□□□ 0.25
KCNQ2-247ENST00000638073 FAM9BQ8IZU0 186 aa16.64■□□□□ 0.25
KCNQ2-247ENST00000638073 SYTL4Q96C24 671 aaPredicted RBP16.64■□□□□ 0.25
KCNQ2-247ENST00000638073 PALLDQ8WX93 1383 aa16.64■□□□□ 0.25
KCNQ2-247ENST00000638073 APAF1O14727 1248 aa16.63■□□□□ 0.25
KCNQ2-247ENST00000638073 APBA3O96018 575 aa16.63■□□□□ 0.25
KCNQ2-247ENST00000638073 SF3B2Q13435 895 aaKnown RBP16.63■□□□□ 0.25
KCNQ2-247ENST00000638073 NCBP3Q53F19 620 aaKnown RBP16.63■□□□□ 0.25
KCNQ2-247ENST00000638073 DEFB132Q7Z7B7 95 aa16.63■□□□□ 0.25
KCNQ2-247ENST00000638073 CAMKK2Q96RR4 588 aa16.63■□□□□ 0.25
KCNQ2-247ENST00000638073 TRIM35Q9UPQ4 493 aa16.63■□□□□ 0.25
KCNQ2-247ENST00000638073 RIPK4P57078 832 aa16.62■□□□□ 0.25
KCNQ2-247ENST00000638073 CABP4P57796 275 aa16.62■□□□□ 0.25
KCNQ2-247ENST00000638073 LMOD3Q0VAK6 560 aa16.62■□□□□ 0.25
KCNQ2-247ENST00000638073 DCTN1Q14203 1278 aa16.62■□□□□ 0.25
KCNQ2-247ENST00000638073 MCM10Q7L590 875 aa16.62■□□□□ 0.25
KCNQ2-247ENST00000638073 RRP7AQ9Y3A4 280 aaKnown RBP16.62■□□□□ 0.25
KCNQ2-247ENST00000638073 C4BP0C0L5 1744 aa16.62■□□□□ 0.25
KCNQ2-247ENST00000638073 UBR3Q6ZT12 1888 aa16.61■□□□□ 0.25
KCNQ2-247ENST00000638073 NFATC2IPQ8NCF5 419 aa16.61■□□□□ 0.25
KCNQ2-247ENST00000638073 RTF1Q92541 710 aaKnown RBP16.61■□□□□ 0.25
KCNQ2-247ENST00000638073 EN1Q05925 392 aaPredicted RBP16.6■□□□□ 0.25
KCNQ2-247ENST00000638073 CCDC27Q2M243 656 aa16.6■□□□□ 0.25
KCNQ2-247ENST00000638073 ATG3Q9NT62 314 aa16.6■□□□□ 0.25
KCNQ2-247ENST00000638073 MYH14Q7Z406 1995 aaKnown RBP16.6■□□□□ 0.25
KCNQ2-247ENST00000638073 TEFQ10587 303 aa16.59■□□□□ 0.25
KCNQ2-247ENST00000638073 EZH2Q15910 746 aaKnown RBP16.59■□□□□ 0.25
KCNQ2-247ENST00000638073 PROM2Q8N271 834 aa16.59■□□□□ 0.25
KCNQ2-247ENST00000638073 SMARCC1Q92922 1105 aaPredicted RBP16.59■□□□□ 0.25
KCNQ2-247ENST00000638073 THUMPD2Q9BTF0 503 aaKnown RBP16.59■□□□□ 0.25
KCNQ2-247ENST00000638073 ASAP1Q9ULH1 1129 aa16.59■□□□□ 0.25
KCNQ2-247ENST00000638073 NEUROD2Q15784 382 aa16.57■□□□□ 0.24
KCNQ2-247ENST00000638073 TXNRD1Q16881 649 aa16.57■□□□□ 0.24
KCNQ2-247ENST00000638073 CASZ1Q86V15 1759 aa16.56■□□□□ 0.24
KCNQ2-247ENST00000638073 SLC27A3Q5K4L6 730 aa16.56■□□□□ 0.24
KCNQ2-247ENST00000638073 NGEFQ8N5V2 710 aa16.55■□□□□ 0.24
KCNQ2-247ENST00000638073 SLC4A9Q96Q91 983 aa16.55■□□□□ 0.24
KCNQ2-247ENST00000638073 LRRC4BQ9NT99 713 aa16.55■□□□□ 0.24
KCNQ2-247ENST00000638073 C4AP0C0L4 1744 aa16.55■□□□□ 0.24
KCNQ2-247ENST00000638073 ZNF521Q96K83 1311 aa16.54■□□□□ 0.24
KCNQ2-247ENST00000638073 LOC102724428A0A0B4J2F2 783 aa16.54■□□□□ 0.24
KCNQ2-247ENST00000638073 SIK1P57059 783 aa16.54■□□□□ 0.24
KCNQ2-247ENST00000638073 SLC39A6Q13433 755 aa16.54■□□□□ 0.24
KCNQ2-247ENST00000638073 TAF7Q15545 349 aaPredicted RBP16.54■□□□□ 0.24
KCNQ2-247ENST00000638073 ZNF790Q6PG37 636 aa16.54■□□□□ 0.24
KCNQ2-247ENST00000638073 WWC1Q8IX03 1113 aa16.54■□□□□ 0.24
KCNQ2-247ENST00000638073 HEG1Q9ULI3 1381 aa16.53■□□□□ 0.24
KCNQ2-247ENST00000638073 BTBD11A6QL63 1104 aa16.53■□□□□ 0.24
KCNQ2-247ENST00000638073 BABAM1Q9NWV8 329 aa16.53■□□□□ 0.24
KCNQ2-247ENST00000638073 KCNQ3O43525 872 aa16.52■□□□□ 0.24
KCNQ2-247ENST00000638073 ZNF853P0CG23 659 aa16.52■□□□□ 0.24
KCNQ2-247ENST00000638073 CCNL1Q9UK58 526 aaPredicted RBP16.52■□□□□ 0.24
KCNQ2-247ENST00000638073 COL24A1Q17RW2 1714 aa16.52■□□□□ 0.24
KCNQ2-247ENST00000638073 ITPK1Q13572 414 aa16.51■□□□□ 0.23
KCNQ2-247ENST00000638073 VSIG10Q8N0Z9 540 aa16.51■□□□□ 0.23
KCNQ2-247ENST00000638073 ANO8Q9HCE9 1232 aaPredicted RBP16.51■□□□□ 0.23
KCNQ2-247ENST00000638073 IL16Q14005 1332 aa16.5■□□□□ 0.23
KCNQ2-247ENST00000638073 SENP3-EIF4A1A0A087X0R7 540 aa16.5■□□□□ 0.23
KCNQ2-247ENST00000638073 CHL1O00533 1208 aa16.5■□□□□ 0.23
KCNQ2-247ENST00000638073 KCNQ4P56696 695 aa16.5■□□□□ 0.23
KCNQ2-247ENST00000638073 TTC5Q8N0Z6 440 aa16.5■□□□□ 0.23
KCNQ2-247ENST00000638073 ZNF496Q96IT1 587 aaPredicted RBP16.5■□□□□ 0.23
KCNQ2-247ENST00000638073 CALD1Q05682 793 aaKnown RBP16.49■□□□□ 0.23
KCNQ2-247ENST00000638073 CFAP44Q96MT7 982 aa16.49■□□□□ 0.23
KCNQ2-247ENST00000638073 IFT57Q9NWB7 429 aa16.49■□□□□ 0.23
KCNQ2-247ENST00000638073 PTCD1O75127 700 aaKnown RBP16.48■□□□□ 0.23
KCNQ2-247ENST00000638073 ATP6V1AP38606 617 aa16.48■□□□□ 0.23
KCNQ2-247ENST00000638073 LINC00116Q8NCU8 138 aa16.48■□□□□ 0.23
KCNQ2-247ENST00000638073 FMNL2Q96PY5 1086 aa16.48■□□□□ 0.23
KCNQ2-247ENST00000638073 MIS18AQ9NYP9 233 aa16.48■□□□□ 0.23
KCNQ2-247ENST00000638073 BCORQ6W2J9 1755 aa16.48■□□□□ 0.23
KCNQ2-247ENST00000638073 CNTNAP4Q9C0A0 1308 aa16.47■□□□□ 0.23
KCNQ2-247ENST00000638073 SCN7AQ01118 1682 aa16.47■□□□□ 0.23
KCNQ2-247ENST00000638073 EIF4A1P60842 406 aaKnown RBP16.47■□□□□ 0.23
KCNQ2-247ENST00000638073 ZNF827Q17R98 1081 aa16.47■□□□□ 0.23
KCNQ2-247ENST00000638073 WDR63Q8IWG1 891 aa16.47■□□□□ 0.23
KCNQ2-247ENST00000638073 AKT1S1Q96B36 256 aa16.47■□□□□ 0.23
KCNQ2-247ENST00000638073 RBM42Q9BTD8 480 aaKnown RBP16.47■□□□□ 0.23
KCNQ2-247ENST00000638073 TSPYL4Q9UJ04 414 aa16.47■□□□□ 0.23
KCNQ2-247ENST00000638073 GNAI1P63096 354 aa16.46■□□□□ 0.23
KCNQ2-247ENST00000638073 MBIPQ9NS73 344 aa16.46■□□□□ 0.23
KCNQ2-247ENST00000638073 CACNA1FO60840 1977 aa16.46■□□□□ 0.22
KCNQ2-247ENST00000638073 DNAJC10Q8IXB1 793 aa16.45■□□□□ 0.22
KCNQ2-247ENST00000638073 SALL2Q9Y467 1007 aaPredicted RBP16.45■□□□□ 0.22
KCNQ2-247ENST00000638073 HMGB2P26583 209 aaKnown RBP16.44■□□□□ 0.22
KCNQ2-247ENST00000638073 PRAMEF22A3QJZ6 481 aa16.43■□□□□ 0.22
KCNQ2-247ENST00000638073 GIGYF1O75420 1035 aaPredicted RBP16.43■□□□□ 0.22
KCNQ2-247ENST00000638073 CYP19A1P11511 503 aaPredicted RBP16.43■□□□□ 0.22
KCNQ2-247ENST00000638073 SLC15A2Q16348 729 aa16.43■□□□□ 0.22
KCNQ2-247ENST00000638073 SPINK5Q9NQ38 1064 aaPredicted RBP16.43■□□□□ 0.22
KCNQ2-247ENST00000638073 FANCIQ9NVI1 1328 aa16.43■□□□□ 0.22
KCNQ2-247ENST00000638073 SNRPA1P09661 255 aaKnown RBP16.42■□□□□ 0.22
KCNQ2-247ENST00000638073 RC3H1Q5TC82 1133 aaKnown RBP16.42■□□□□ 0.22
KCNQ2-247ENST00000638073 AMIGO3Q86WK7 504 aa16.42■□□□□ 0.22
KCNQ2-247ENST00000638073 CRKLP46109 303 aaKnown RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms