RNA–Protein interactions for RNA: ENST00000637942.1

CACNB4-267, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, human

TSL 5

Gene CACNB4, Length 4,020 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB4-267	ENST00000637942	BRPF1	P55201	1214 aa	Predicted RBP	3.9	□□□□□ -1.79
CACNB4-267	ENST00000637942	PLEKHG3	A1L390	1219 aa		3.9	□□□□□ -1.79
CACNB4-267	ENST00000637942	U2SURP	O15042	1029 aa	Known RBP	3.9	□□□□□ -1.79
CACNB4-267	ENST00000637942	FCHSD2	O94868	740 aa		3.9	□□□□□ -1.79
CACNB4-267	ENST00000637942	RIPK4	P57078	832 aa		3.9	□□□□□ -1.79
CACNB4-267	ENST00000637942	AEBP1	Q8IUX7	1158 aa		3.9	□□□□□ -1.79
CACNB4-267	ENST00000637942	STK32B	Q9NY57	414 aa		3.9	□□□□□ -1.79
CACNB4-267	ENST00000637942	TTC21B	Q7Z4L5	1316 aa		3.9	□□□□□ -1.79
CACNB4-267	ENST00000637942	GLI3	P10071	1580 aa		3.9	□□□□□ -1.79
CACNB4-267	ENST00000637942	FAM83G	A6ND36	823 aa		3.89	□□□□□ -1.79
CACNB4-267	ENST00000637942	HMOX1	P09601	288 aa		3.89	□□□□□ -1.79
CACNB4-267	ENST00000637942	FAM161A	Q3B820	660 aa		3.89	□□□□□ -1.79
CACNB4-267	ENST00000637942	TOM1L2	Q6ZVM7	507 aa		3.89	□□□□□ -1.79
CACNB4-267	ENST00000637942	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	3.89	□□□□□ -1.79
CACNB4-267	ENST00000637942	RTF1	Q92541	710 aa	Known RBP	3.89	□□□□□ -1.79
CACNB4-267	ENST00000637942	ACE	P12821	1306 aa		3.89	□□□□□ -1.79
CACNB4-267	ENST00000637942	ATP10D	Q9P241	1426 aa		3.89	□□□□□ -1.79
CACNB4-267	ENST00000637942	SLIT3	O75094	1523 aa		3.89	□□□□□ -1.79
CACNB4-267	ENST00000637942	VAMP4	O75379	141 aa		3.89	□□□□□ -1.79
CACNB4-267	ENST00000637942	EIF4A2	Q14240	407 aa	Known RBP	3.89	□□□□□ -1.79
CACNB4-267	ENST00000637942	NBR1	Q14596	966 aa		3.89	□□□□□ -1.79
CACNB4-267	ENST00000637942	NFE2L2	Q16236	605 aa		3.89	□□□□□ -1.79
CACNB4-267	ENST00000637942	KRT27	Q7Z3Y8	459 aa		3.89	□□□□□ -1.79
CACNB4-267	ENST00000637942	MRPL50	Q8N5N7	158 aa	Known RBP	3.89	□□□□□ -1.79
CACNB4-267	ENST00000637942	RAPGEF4	Q8WZA2	1011 aa		3.89	□□□□□ -1.79
CACNB4-267	ENST00000637942	FRAT1	Q92837	279 aa	Predicted RBP	3.89	□□□□□ -1.79
CACNB4-267	ENST00000637942	SYTL4	Q96C24	671 aa	Predicted RBP	3.89	□□□□□ -1.79
CACNB4-267	ENST00000637942	NOB1	Q9ULX3	412 aa	Known RBP	3.89	□□□□□ -1.79
CACNB4-267	ENST00000637942	PDZRN3	Q9UPQ7	1066 aa		3.89	□□□□□ -1.79
CACNB4-267	ENST00000637942	KDR	P35968	1356 aa		3.89	□□□□□ -1.79
CACNB4-267	ENST00000637942	CT47B1	P0C2W7	299 aa	Predicted RBP	3.89	□□□□□ -1.79
CACNB4-267	ENST00000637942	TMEM57	Q8N5G2	664 aa		3.89	□□□□□ -1.79
CACNB4-267	ENST00000637942	MYH16	Q9H6N6	1097 aa		3.89	□□□□□ -1.79
CACNB4-267	ENST00000637942	MBIP	Q9NS73	344 aa		3.89	□□□□□ -1.79
CACNB4-267	ENST00000637942	ZBTB40	Q9NUA8	1239 aa		3.89	□□□□□ -1.79
CACNB4-267	ENST00000637942	SHANK3	Q9BYB0	1731 aa		3.89	□□□□□ -1.79
CACNB4-267	ENST00000637942	SCN11A	Q9UI33	1791 aa		3.89	□□□□□ -1.79
CACNB4-267	ENST00000637942	RGS3	P49796	1198 aa		3.88	□□□□□ -1.79
CACNB4-267	ENST00000637942	GPR162	Q16538	588 aa		3.88	□□□□□ -1.79
CACNB4-267	ENST00000637942	SIRT2	Q8IXJ6	389 aa		3.88	□□□□□ -1.79
CACNB4-267	ENST00000637942	ABTB2	Q8N961	1025 aa		3.88	□□□□□ -1.79
CACNB4-267	ENST00000637942	PMFBP1	Q8TBY8	1022 aa		3.88	□□□□□ -1.79
CACNB4-267	ENST00000637942	SPG7	Q9UQ90	795 aa		3.88	□□□□□ -1.79
CACNB4-267	ENST00000637942	ABCC4	O15439	1325 aa		3.88	□□□□□ -1.79
CACNB4-267	ENST00000637942	ABCA3	Q99758	1704 aa		3.88	□□□□□ -1.79
CACNB4-267	ENST00000637942	AK9	Q5TCS8	1911 aa		3.88	□□□□□ -1.79
CACNB4-267	ENST00000637942	APBA3	O96018	575 aa		3.88	□□□□□ -1.79
CACNB4-267	ENST00000637942	SLC4A3	P48751	1232 aa		3.88	□□□□□ -1.79
CACNB4-267	ENST00000637942	C1orf141	Q5JVX7	400 aa		3.88	□□□□□ -1.79
CACNB4-267	ENST00000637942	C16orf71	Q8IYS4	520 aa	Predicted RBP	3.88	□□□□□ -1.79
CACNB4-267	ENST00000637942	C8orf58	Q8NAV2	365 aa		3.88	□□□□□ -1.79
CACNB4-267	ENST00000637942	NCAPD2	Q15021	1401 aa		3.88	□□□□□ -1.79
CACNB4-267	ENST00000637942	TAT	P17735	454 aa	Predicted RBP	3.88	□□□□□ -1.79
CACNB4-267	ENST00000637942	DCTN1	Q14203	1278 aa		3.88	□□□□□ -1.79
CACNB4-267	ENST00000637942	PLEKHO1	Q53GL0	409 aa	Predicted RBP	3.88	□□□□□ -1.79
CACNB4-267	ENST00000637942	ZKSCAN2	Q63HK3	967 aa		3.88	□□□□□ -1.79
CACNB4-267	ENST00000637942	ATF7IP	Q6VMQ6	1270 aa		3.88	□□□□□ -1.79
CACNB4-267	ENST00000637942	SMARCC1	Q92922	1105 aa	Predicted RBP	3.88	□□□□□ -1.79
CACNB4-267	ENST00000637942	KIF24	Q5T7B8	1368 aa		3.87	□□□□□ -1.79
CACNB4-267	ENST00000637942	ANP32A	P39687	249 aa	Known RBP	3.87	□□□□□ -1.79
CACNB4-267	ENST00000637942	HDAC1	Q13547	482 aa	Predicted RBP	3.87	□□□□□ -1.79
CACNB4-267	ENST00000637942	ALDH1L2	Q3SY69	923 aa		3.87	□□□□□ -1.79
CACNB4-267	ENST00000637942	DZIP1L	Q8IYY4	767 aa	Known RBP	3.87	□□□□□ -1.79
CACNB4-267	ENST00000637942	HS6ST3	Q8IZP7	471 aa		3.87	□□□□□ -1.79
CACNB4-267	ENST00000637942	KIF1A	Q12756	1690 aa		3.87	□□□□□ -1.79
CACNB4-267	ENST00000637942	MAP3K19	Q56UN5	1328 aa		3.87	□□□□□ -1.79
CACNB4-267	ENST00000637942	KRT24	Q2M2I5	525 aa		3.87	□□□□□ -1.79
CACNB4-267	ENST00000637942	FAM196A	Q6ZSG2	479 aa		3.87	□□□□□ -1.79
CACNB4-267	ENST00000637942	SMC5	Q8IY18	1101 aa		3.87	□□□□□ -1.79
CACNB4-267	ENST00000637942	SPON1	Q9HCB6	807 aa		3.87	□□□□□ -1.79
CACNB4-267	ENST00000637942	IFT57	Q9NWB7	429 aa		3.87	□□□□□ -1.79
CACNB4-267	ENST00000637942	NLRP2	Q9NX02	1062 aa		3.87	□□□□□ -1.79
CACNB4-267	ENST00000637942	PKD1L3	Q7Z443	1732 aa		3.87	□□□□□ -1.79
CACNB4-267	ENST00000637942	SBNO1	A3KN83	1393 aa		3.87	□□□□□ -1.79
CACNB4-267	ENST00000637942	ZBTB7B	O15156	539 aa	Predicted RBP	3.87	□□□□□ -1.79
CACNB4-267	ENST00000637942	NLRP6	P59044	892 aa		3.87	□□□□□ -1.79
CACNB4-267	ENST00000637942	HSP90AB2P	Q58FF8	381 aa		3.87	□□□□□ -1.79
CACNB4-267	ENST00000637942	POTEA	Q6S8J7	498 aa		3.87	□□□□□ -1.79
CACNB4-267	ENST00000637942	BRINP3	Q76B58	766 aa		3.87	□□□□□ -1.79
CACNB4-267	ENST00000637942	UNC5CL	Q8IV45	518 aa		3.87	□□□□□ -1.79
CACNB4-267	ENST00000637942	SMC4	Q9NTJ3	1288 aa		3.87	□□□□□ -1.79
CACNB4-267	ENST00000637942	ADGRL3	Q9HAR2	1447 aa		3.87	□□□□□ -1.79
CACNB4-267	ENST00000637942	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	3.87	□□□□□ -1.79
CACNB4-267	ENST00000637942		A0A0U1RQG5	324 aa	Predicted RBP	3.86	□□□□□ -1.79
CACNB4-267	ENST00000637942	YY1	P25490	414 aa		3.86	□□□□□ -1.79
CACNB4-267	ENST00000637942	ZC3H6	P61129	1189 aa	Known RBP	3.86	□□□□□ -1.79
CACNB4-267	ENST00000637942	RBM10	P98175	930 aa	Known RBP	3.86	□□□□□ -1.79
CACNB4-267	ENST00000637942	AMOT	Q4VCS5	1084 aa		3.86	□□□□□ -1.79
CACNB4-267	ENST00000637942	SEPT12	Q8IYM1	358 aa		3.86	□□□□□ -1.79
CACNB4-267	ENST00000637942	THRAP3	Q9Y2W1	955 aa	Known RBP	3.86	□□□□□ -1.79
CACNB4-267	ENST00000637942	IGSF1	Q8N6C5	1336 aa		3.86	□□□□□ -1.79
CACNB4-267	ENST00000637942	FAM98C	Q17RN3	349 aa	Known RBP	3.86	□□□□□ -1.79
CACNB4-267	ENST00000637942	FLAD1	Q8NFF5	587 aa		3.86	□□□□□ -1.79
CACNB4-267	ENST00000637942	GAS2L2	Q8NHY3	880 aa		3.86	□□□□□ -1.79
CACNB4-267	ENST00000637942	TEX13A	Q9BXU3	409 aa	Predicted RBP	3.86	□□□□□ -1.79
CACNB4-267	ENST00000637942	PXDN	Q92626	1479 aa		3.86	□□□□□ -1.79
CACNB4-267	ENST00000637942	STRC	Q7RTU9	1775 aa		3.86	□□□□□ -1.79
CACNB4-267	ENST00000637942	GJD4	Q96KN9	370 aa	Predicted RBP	3.86	□□□□□ -1.79
CACNB4-267	ENST00000637942	ANTXR1	Q9H6X2	564 aa		3.86	□□□□□ -1.79
CACNB4-267	ENST00000637942	LAS1L	Q9Y4W2	734 aa	Known RBP	3.86	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms