RNA–Protein interactions for RNA: ENST00000637881.1

CDKL5-211, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 1,782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-211ENST00000637881 SENP3-EIF4A1A0A087X0R7 540 aa9.52□□□□□ -0.88
CDKL5-211ENST00000637881 LOC102724159A0A0B4J2E5 919 aa9.52□□□□□ -0.88
CDKL5-211ENST00000637881 PATL2C9JE40 543 aaKnown RBP9.52□□□□□ -0.88
CDKL5-211ENST00000637881 PWP2Q15269 919 aaKnown RBP9.52□□□□□ -0.88
CDKL5-211ENST00000637881 CDCA8Q53HL2 280 aa9.52□□□□□ -0.88
CDKL5-211ENST00000637881 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.52□□□□□ -0.88
CDKL5-211ENST00000637881 MNS1Q8NEH6 495 aa9.52□□□□□ -0.88
CDKL5-211ENST00000637881 RWDD1Q9H446 243 aaPredicted RBP9.52□□□□□ -0.88
CDKL5-211ENST00000637881 RAI14Q9P0K7 980 aa9.52□□□□□ -0.88
CDKL5-211ENST00000637881 RSPH14Q9UHP6 348 aa9.52□□□□□ -0.88
CDKL5-211ENST00000637881 NRXN3Q9Y4C0 1643 aa9.52□□□□□ -0.88
CDKL5-211ENST00000637881 ROBO2Q9HCK4 1378 aa9.52□□□□□ -0.89
CDKL5-211ENST00000637881 SMTNL1A8MU46 457 aa9.52□□□□□ -0.89
CDKL5-211ENST00000637881 CYP2E1P05181 493 aaPredicted RBP9.52□□□□□ -0.89
CDKL5-211ENST00000637881 SSFA2P28290 1259 aa9.52□□□□□ -0.89
CDKL5-211ENST00000637881 SLFNL1Q499Z3 407 aa9.52□□□□□ -0.89
CDKL5-211ENST00000637881 GOLGA6L1Q8N7Z2 621 aa9.52□□□□□ -0.89
CDKL5-211ENST00000637881 ZNF397Q8NF99 534 aaPredicted RBP9.52□□□□□ -0.89
CDKL5-211ENST00000637881 AK9Q5TCS8 1911 aa9.52□□□□□ -0.89
CDKL5-211ENST00000637881 ANKRD36BQ8N2N9 1353 aa9.51□□□□□ -0.89
CDKL5-211ENST00000637881 CASQ1P31415 396 aa9.51□□□□□ -0.89
CDKL5-211ENST00000637881 TXLNBQ8N3L3 684 aa9.51□□□□□ -0.89
CDKL5-211ENST00000637881 JARID2Q92833 1246 aaPredicted RBP9.51□□□□□ -0.89
CDKL5-211ENST00000637881 TSPY26PQ9H489 355 aa9.51□□□□□ -0.89
CDKL5-211ENST00000637881 DONSONQ9NYP3 566 aa9.51□□□□□ -0.89
CDKL5-211ENST00000637881 TRPM1Q7Z4N2 1603 aa9.51□□□□□ -0.89
CDKL5-211ENST00000637881 ABCC11Q96J66 1382 aa9.5□□□□□ -0.89
CDKL5-211ENST00000637881 RNF20Q5VTR2 975 aa9.5□□□□□ -0.89
CDKL5-211ENST00000637881 SYAP1Q96A49 352 aaPredicted RBP9.5□□□□□ -0.89
CDKL5-211ENST00000637881 RBM28Q9NW13 759 aaKnown RBP9.5□□□□□ -0.89
CDKL5-211ENST00000637881 ASXL1Q8IXJ9 1541 aa9.5□□□□□ -0.89
CDKL5-211ENST00000637881 HNRNPH2P55795 449 aaKnown RBP9.5□□□□□ -0.89
CDKL5-211ENST00000637881 PIK3R4Q99570 1358 aa9.49□□□□□ -0.89
CDKL5-211ENST00000637881 ADGRB1O14514 1584 aa9.49□□□□□ -0.89
CDKL5-211ENST00000637881 KIAA1524Q8TCG1 905 aa9.49□□□□□ -0.89
CDKL5-211ENST00000637881 KIF1BPQ96EK5 621 aa9.49□□□□□ -0.89
CDKL5-211ENST00000637881 CWC22Q9HCG8 908 aaKnown RBP9.49□□□□□ -0.89
CDKL5-211ENST00000637881 CWC15Q9P013 229 aaKnown RBP9.49□□□□□ -0.89
CDKL5-211ENST00000637881 TMEM94Q12767 1356 aa9.48□□□□□ -0.89
CDKL5-211ENST00000637881 SRPK2P78362 688 aaKnown RBP9.48□□□□□ -0.89
CDKL5-211ENST00000637881 CT47A1Q5JQC4 288 aaPredicted RBP9.48□□□□□ -0.89
CDKL5-211ENST00000637881 RPAINQ86UA6 219 aa9.48□□□□□ -0.89
CDKL5-211ENST00000637881 CFAP44Q96MT7 982 aa9.48□□□□□ -0.89
CDKL5-211ENST00000637881 PAXBP1Q9Y5B6 917 aa9.48□□□□□ -0.89
CDKL5-211ENST00000637881 DIP2AQ14689 1571 aa9.48□□□□□ -0.89
CDKL5-211ENST00000637881 GPRASP1Q5JY77 1395 aa9.48□□□□□ -0.89
CDKL5-211ENST00000637881 CLSTN1O94985 981 aa9.47□□□□□ -0.89
CDKL5-211ENST00000637881 MCTP1Q6DN14 999 aa9.47□□□□□ -0.89
CDKL5-211ENST00000637881 NOL10Q9BSC4 688 aaKnown RBP9.47□□□□□ -0.89
CDKL5-211ENST00000637881 CDK19Q9BWU1 502 aa9.47□□□□□ -0.89
CDKL5-211ENST00000637881 CABP2Q9NPB3 220 aa9.47□□□□□ -0.89
CDKL5-211ENST00000637881 MED4Q9NPJ6 270 aa9.47□□□□□ -0.89
CDKL5-211ENST00000637881 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.47□□□□□ -0.89
CDKL5-211ENST00000637881 ATAD2Q6PL18 1390 aa9.47□□□□□ -0.89
CDKL5-211ENST00000637881 ATF3P18847 181 aa9.47□□□□□ -0.89
CDKL5-211ENST00000637881 CALRP27797 417 aaKnown RBP9.47□□□□□ -0.89
CDKL5-211ENST00000637881 NOM1Q5C9Z4 860 aaKnown RBP9.47□□□□□ -0.89
CDKL5-211ENST00000637881 TEX35Q5T0J7 233 aa9.47□□□□□ -0.89
CDKL5-211ENST00000637881 CCDC91Q7Z6B0 441 aa9.47□□□□□ -0.89
CDKL5-211ENST00000637881 CHMP4CQ96CF2 233 aa9.47□□□□□ -0.89
CDKL5-211ENST00000637881 PLCD4Q9BRC7 762 aa9.47□□□□□ -0.89
CDKL5-211ENST00000637881 SETD1AO15047 1707 aaKnown RBP9.46□□□□□ -0.89
CDKL5-211ENST00000637881 A0A1B0GUL7 405 aa9.46□□□□□ -0.9
CDKL5-211ENST00000637881 ERICH4A6NGS2 130 aa9.46□□□□□ -0.9
CDKL5-211ENST00000637881 PER1O15534 1290 aaPredicted RBP9.46□□□□□ -0.9
CDKL5-211ENST00000637881 GPT2Q8TD30 523 aa9.46□□□□□ -0.9
CDKL5-211ENST00000637881 USP25Q9UHP3 1055 aa9.46□□□□□ -0.9
CDKL5-211ENST00000637881 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.46□□□□□ -0.9
CDKL5-211ENST00000637881 LTBP4Q8N2S1 1624 aa9.46□□□□□ -0.9
CDKL5-211ENST00000637881 KIAA1210Q9ULL0 1709 aa9.46□□□□□ -0.9
CDKL5-211ENST00000637881 TMF1P82094 1093 aa9.45□□□□□ -0.9
CDKL5-211ENST00000637881 RABEP1Q15276 862 aa9.45□□□□□ -0.9
CDKL5-211ENST00000637881 SWT1Q5T5J6 900 aaKnown RBP9.45□□□□□ -0.9
CDKL5-211ENST00000637881 TESK2Q96S53 571 aa9.45□□□□□ -0.9
CDKL5-211ENST00000637881 C19orf44Q9H6X5 657 aa9.45□□□□□ -0.9
CDKL5-211ENST00000637881 BSDC1Q9NW68 430 aaPredicted RBP9.45□□□□□ -0.9
CDKL5-211ENST00000637881 CHD2O14647 1828 aaKnown RBP9.45□□□□□ -0.9
CDKL5-211ENST00000637881 SYCE3A1L190 88 aa9.45□□□□□ -0.9
CDKL5-211ENST00000637881 FAM177BA6PVY3 158 aa9.45□□□□□ -0.9
CDKL5-211ENST00000637881 WASLO00401 505 aaPredicted RBP9.45□□□□□ -0.9
CDKL5-211ENST00000637881 PIP4K2BP78356 416 aa9.45□□□□□ -0.9
CDKL5-211ENST00000637881 TRDNQ13061 729 aa9.45□□□□□ -0.9
CDKL5-211ENST00000637881 BMS1Q14692 1282 aaKnown RBP9.45□□□□□ -0.9
CDKL5-211ENST00000637881 ZBTB9Q96C00 473 aa9.45□□□□□ -0.9
CDKL5-211ENST00000637881 TMEM63CQ9P1W3 806 aa9.45□□□□□ -0.9
CDKL5-211ENST00000637881 CCDC9Q9Y3X0 531 aaKnown RBP9.45□□□□□ -0.9
CDKL5-211ENST00000637881 EVC2Q86UK5 1308 aa9.44□□□□□ -0.9
CDKL5-211ENST00000637881 KIF3CO14782 793 aa9.44□□□□□ -0.9
CDKL5-211ENST00000637881 PRR29P0C7W0 189 aa9.44□□□□□ -0.9
CDKL5-211ENST00000637881 ATP2B1P20020 1258 aa9.44□□□□□ -0.9
CDKL5-211ENST00000637881 GSCP56915 257 aaPredicted RBP9.44□□□□□ -0.9
CDKL5-211ENST00000637881 WDR43Q15061 677 aaKnown RBP eCLIP9.44□□□□□ -0.9
CDKL5-211ENST00000637881 SUGP1Q8IWZ8 645 aaKnown RBP9.44□□□□□ -0.9
CDKL5-211ENST00000637881 GAS2L2Q8NHY3 880 aa9.44□□□□□ -0.9
CDKL5-211ENST00000637881 POLKQ9UBT6 870 aa9.44□□□□□ -0.9
CDKL5-211ENST00000637881 KNSTRNQ9Y448 316 aa9.44□□□□□ -0.9
CDKL5-211ENST00000637881 V9GYY5 206 aaPredicted RBP9.44□□□□□ -0.9
CDKL5-211ENST00000637881 MSH6P52701 1360 aa9.44□□□□□ -0.9
CDKL5-211ENST00000637881 STRCP1A6NGW2 1772 aa9.44□□□□□ -0.9
CDKL5-211ENST00000637881 FAM135BQ49AJ0 1406 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms