RNA–Protein interactions for RNA: ENST00000637828.1

CACNB4-264, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, humanhuman

TSL 5

Gene CACNB4, Length 1,831 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4-264ENST00000637828 BCL11BQ9C0K0 894 aaPredicted RBP11.48□□□□□ -0.57
CACNB4-264ENST00000637828 SOS1Q07889 1333 aaPredicted RBP11.48□□□□□ -0.57
CACNB4-264ENST00000637828 SCN11AQ9UI33 1791 aa11.47□□□□□ -0.57
CACNB4-264ENST00000637828 SMARCC1Q92922 1105 aaPredicted RBP11.47□□□□□ -0.57
CACNB4-264ENST00000637828 DLG5Q8TDM6 1919 aa11.47□□□□□ -0.57
CACNB4-264ENST00000637828 BTBD11A6QL63 1104 aa11.46□□□□□ -0.57
CACNB4-264ENST00000637828 DCTN1Q14203 1278 aa11.46□□□□□ -0.57
CACNB4-264ENST00000637828 NFATC2IPQ8NCF5 419 aa11.46□□□□□ -0.57
CACNB4-264ENST00000637828 PRIM1P49642 420 aaKnown RBP11.46□□□□□ -0.58
CACNB4-264ENST00000637828 SALL2Q9Y467 1007 aaPredicted RBP11.46□□□□□ -0.58
CACNB4-264ENST00000637828 CT47B1P0C2W7 299 aaPredicted RBP11.45□□□□□ -0.58
CACNB4-264ENST00000637828 SLFN5Q08AF3 891 aa11.45□□□□□ -0.58
CACNB4-264ENST00000637828 CCDC125Q86Z20 511 aa11.45□□□□□ -0.58
CACNB4-264ENST00000637828 TRMT2AQ8IZ69 625 aaKnown RBP11.45□□□□□ -0.58
CACNB4-264ENST00000637828 PIGBQ92521 554 aa11.45□□□□□ -0.58
CACNB4-264ENST00000637828 HOXD11P31277 338 aaPredicted RBP11.44□□□□□ -0.58
CACNB4-264ENST00000637828 ZNF790Q6PG37 636 aa11.44□□□□□ -0.58
CACNB4-264ENST00000637828 TTC5Q8N0Z6 440 aa11.44□□□□□ -0.58
CACNB4-264ENST00000637828 TSPYL4Q9UJ04 414 aa11.44□□□□□ -0.58
CACNB4-264ENST00000637828 HOXB7P09629 217 aa11.44□□□□□ -0.58
CACNB4-264ENST00000637828 VSIG10Q8N0Z9 540 aa11.44□□□□□ -0.58
CACNB4-264ENST00000637828 ZNF428Q96B54 188 aa11.44□□□□□ -0.58
CACNB4-264ENST00000637828 THUMPD2Q9BTF0 503 aaKnown RBP11.44□□□□□ -0.58
CACNB4-264ENST00000637828 BRWD3Q6RI45 1802 aa11.44□□□□□ -0.58
CACNB4-264ENST00000637828 NHSQ6T4R5 1651 aa11.43□□□□□ -0.58
CACNB4-264ENST00000637828 SYTL4Q96C24 671 aaPredicted RBP11.43□□□□□ -0.58
CACNB4-264ENST00000637828 FMNL2Q96PY5 1086 aa11.42□□□□□ -0.58
CACNB4-264ENST00000637828 TEX13AQ9BXU3 409 aaPredicted RBP11.42□□□□□ -0.58
CACNB4-264ENST00000637828 MBIPQ9NS73 344 aa11.42□□□□□ -0.58
CACNB4-264ENST00000637828 TOGARAM1Q9Y4F4 1720 aa11.42□□□□□ -0.58
CACNB4-264ENST00000637828 SIPA1L3O60292 1781 aaPredicted RBP11.42□□□□□ -0.58
CACNB4-264ENST00000637828 DOT1LQ8TEK3 1739 aa11.42□□□□□ -0.58
CACNB4-264ENST00000637828 PLSCR1O15162 318 aa11.42□□□□□ -0.58
CACNB4-264ENST00000637828 ACSBG1Q96GR2 724 aa11.42□□□□□ -0.58
CACNB4-264ENST00000637828 YTHDC1Q96MU7 727 aaKnown RBP11.42□□□□□ -0.58
CACNB4-264ENST00000637828 ATG3Q9NT62 314 aa11.42□□□□□ -0.58
CACNB4-264ENST00000637828 FANCIQ9NVI1 1328 aa11.42□□□□□ -0.58
CACNB4-264ENST00000637828 HEG1Q9ULI3 1381 aa11.41□□□□□ -0.58
CACNB4-264ENST00000637828 EIF4A1P60842 406 aaKnown RBP11.41□□□□□ -0.58
CACNB4-264ENST00000637828 DUSP27Q5VZP5 1158 aa11.41□□□□□ -0.58
CACNB4-264ENST00000637828 LAS1LQ9Y4W2 734 aaKnown RBP11.41□□□□□ -0.58
CACNB4-264ENST00000637828 KCNQ2O43526 872 aa11.4□□□□□ -0.58
CACNB4-264ENST00000637828 FAM182BQ5T319 152 aa11.4□□□□□ -0.58
CACNB4-264ENST00000637828 PALLDQ8WX93 1383 aa11.4□□□□□ -0.59
CACNB4-264ENST00000637828 TRIM37O94972 964 aa11.39□□□□□ -0.59
CACNB4-264ENST00000637828 SNRPA1P09661 255 aaKnown RBP11.39□□□□□ -0.59
CACNB4-264ENST00000637828 SF3B2Q13435 895 aaKnown RBP11.39□□□□□ -0.59
CACNB4-264ENST00000637828 SLC27A3Q5K4L6 730 aa11.39□□□□□ -0.59
CACNB4-264ENST00000637828 SPINK5Q9NQ38 1064 aaPredicted RBP11.39□□□□□ -0.59
CACNB4-264ENST00000637828 ITGB4P16144 1822 aa11.39□□□□□ -0.59
CACNB4-264ENST00000637828 PAPPAQ13219 1627 aa11.39□□□□□ -0.59
CACNB4-264ENST00000637828 CDCA7LQ96GN5 454 aa11.39□□□□□ -0.59
CACNB4-264ENST00000637828 ASAP1Q9ULH1 1129 aa11.39□□□□□ -0.59
CACNB4-264ENST00000637828 VIRMAQ69YN4 1812 aaKnown RBP11.39□□□□□ -0.59
CACNB4-264ENST00000637828 SBF2Q86WG5 1849 aa11.39□□□□□ -0.59
CACNB4-264ENST00000637828 KDM3BQ7LBC6 1761 aa11.39□□□□□ -0.59
CACNB4-264ENST00000637828 GIGYF1O75420 1035 aaPredicted RBP11.38□□□□□ -0.59
CACNB4-264ENST00000637828 ZNF496Q96IT1 587 aaPredicted RBP11.38□□□□□ -0.59
CACNB4-264ENST00000637828 RNF216Q9NWF9 866 aaPredicted RBP11.38□□□□□ -0.59
CACNB4-264ENST00000637828 ZNF831Q5JPB2 1677 aa11.38□□□□□ -0.59
CACNB4-264ENST00000637828 ERBB4Q15303 1308 aa11.37□□□□□ -0.59
CACNB4-264ENST00000637828 SENP3-EIF4A1A0A087X0R7 540 aa11.37□□□□□ -0.59
CACNB4-264ENST00000637828 LOC102724428A0A0B4J2F2 783 aa11.37□□□□□ -0.59
CACNB4-264ENST00000637828 DCAF8L1A6NGE4 600 aa11.37□□□□□ -0.59
CACNB4-264ENST00000637828 SIK1P57059 783 aa11.37□□□□□ -0.59
CACNB4-264ENST00000637828 SLC39A6Q13433 755 aa11.37□□□□□ -0.59
CACNB4-264ENST00000637828 TSR2Q969E8 191 aaKnown RBP11.37□□□□□ -0.59
CACNB4-264ENST00000637828 MIS18AQ9NYP9 233 aa11.37□□□□□ -0.59
CACNB4-264ENST00000637828 KCPQ6ZWJ8 1503 aa11.37□□□□□ -0.59
CACNB4-264ENST00000637828 STARD3NLO95772 234 aa11.37□□□□□ -0.59
CACNB4-264ENST00000637828 UBR2Q8IWV8 1755 aa11.37□□□□□ -0.59
CACNB4-264ENST00000637828 CICQ96RK0 1608 aaPredicted RBP11.36□□□□□ -0.59
CACNB4-264ENST00000637828 RGPD3A6NKT7 1758 aaPredicted RBP11.36□□□□□ -0.59
CACNB4-264ENST00000637828 RGPD4Q7Z3J3 1758 aa11.36□□□□□ -0.59
CACNB4-264ENST00000637828 APBA3O96018 575 aa11.36□□□□□ -0.59
CACNB4-264ENST00000637828 BAG6P46379 1132 aa11.36□□□□□ -0.59
CACNB4-264ENST00000637828 EXOSC9Q06265 439 aaKnown RBP11.36□□□□□ -0.59
CACNB4-264ENST00000637828 TWISTNBQ3B726 338 aaPredicted RBP11.36□□□□□ -0.59
CACNB4-264ENST00000637828 BTAF1O14981 1849 aa11.35□□□□□ -0.59
CACNB4-264ENST00000637828 PTCD1O75127 700 aaKnown RBP11.35□□□□□ -0.59
CACNB4-264ENST00000637828 ALDH1L2Q3SY69 923 aa11.35□□□□□ -0.59
CACNB4-264ENST00000637828 KAT6BQ8WYB5 2073 aa11.35□□□□□ -0.59
CACNB4-264ENST00000637828 EP400Q96L91 3159 aa11.35□□□□□ -0.59
CACNB4-264ENST00000637828 KCNQ3O43525 872 aa11.35□□□□□ -0.59
CACNB4-264ENST00000637828 VAMP4O75379 141 aa11.35□□□□□ -0.59
CACNB4-264ENST00000637828 CCDC30Q5VVM6 783 aa11.35□□□□□ -0.59
CACNB4-264ENST00000637828 RBM42Q9BTD8 480 aaKnown RBP11.35□□□□□ -0.59
CACNB4-264ENST00000637828 ATP6V1AP38606 617 aa11.34□□□□□ -0.59
CACNB4-264ENST00000637828 BRPF1P55201 1214 aaPredicted RBP11.34□□□□□ -0.59
CACNB4-264ENST00000637828 RC3H1Q5TC82 1133 aaKnown RBP11.34□□□□□ -0.59
CACNB4-264ENST00000637828 C8orf58Q8NAV2 365 aa11.34□□□□□ -0.59
CACNB4-264ENST00000637828 CCNL1Q9UK58 526 aaPredicted RBP11.34□□□□□ -0.59
CACNB4-264ENST00000637828 CENPBP07199 599 aaPredicted RBP11.33□□□□□ -0.6
CACNB4-264ENST00000637828 PTF1AQ7RTS3 328 aa11.33□□□□□ -0.6
CACNB4-264ENST00000637828 TXNRD1Q16881 649 aa11.32□□□□□ -0.6
CACNB4-264ENST00000637828 HDGFL1Q5TGJ6 251 aa11.32□□□□□ -0.6
CACNB4-264ENST00000637828 STK31Q9BXU1 1019 aa11.32□□□□□ -0.6
CACNB4-264ENST00000637828 DBF4Q9UBU7 674 aaPredicted RBP11.32□□□□□ -0.6
CACNB4-264ENST00000637828 LY75O60449 1722 aa11.32□□□□□ -0.6
CACNB4-264ENST00000637828 TNS1Q9HBL0 1735 aaKnown RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms