RNA–Protein interactions for RNA: ENST00000637485.1

CACNA1A-242, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 5,481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-242ENST00000637485 DHX16O60231 1041 aaKnown RBP11.33□□□□□ -0.6
CACNA1A-242ENST00000637485 THEMISQ8N1K5 641 aaPredicted RBP11.33□□□□□ -0.6
CACNA1A-242ENST00000637485 FEZ1Q99689 392 aa11.33□□□□□ -0.6
CACNA1A-242ENST00000637485 RPRD2Q5VT52 1461 aaKnown RBP11.33□□□□□ -0.6
CACNA1A-242ENST00000637485 TWISTNBQ3B726 338 aaPredicted RBP11.33□□□□□ -0.6
CACNA1A-242ENST00000637485 G3V3G9 751 aa11.33□□□□□ -0.6
CACNA1A-242ENST00000637485 DCAF8Q5TAQ9 597 aa11.33□□□□□ -0.6
CACNA1A-242ENST00000637485 KIF4BQ2VIQ3 1234 aa11.32□□□□□ -0.6
CACNA1A-242ENST00000637485 PLEKHO1Q53GL0 409 aaPredicted RBP11.32□□□□□ -0.6
CACNA1A-242ENST00000637485 ZNF428Q96B54 188 aa11.32□□□□□ -0.6
CACNA1A-242ENST00000637485 IFFO1Q0D2I5 559 aa11.32□□□□□ -0.6
CACNA1A-242ENST00000637485 CCDC43Q96MW1 224 aaKnown RBP11.32□□□□□ -0.6
CACNA1A-242ENST00000637485 CABP1Q9NZU7 370 aa11.32□□□□□ -0.6
CACNA1A-242ENST00000637485 C11orf95C9JLR9 678 aaPredicted RBP11.32□□□□□ -0.6
CACNA1A-242ENST00000637485 GSDMDP57764 484 aa11.32□□□□□ -0.6
CACNA1A-242ENST00000637485 KIF5BP33176 963 aa11.31□□□□□ -0.6
CACNA1A-242ENST00000637485 ANKRD1Q15327 319 aa11.31□□□□□ -0.6
CACNA1A-242ENST00000637485 RIC3Q7Z5B4 369 aa11.31□□□□□ -0.6
CACNA1A-242ENST00000637485 PDZRN3Q9UPQ7 1066 aa11.31□□□□□ -0.6
CACNA1A-242ENST00000637485 FAM135AQ9P2D6 1515 aa11.31□□□□□ -0.6
CACNA1A-242ENST00000637485 CCDC183Q5T5S1 534 aa11.31□□□□□ -0.6
CACNA1A-242ENST00000637485 MSL1Q68DK7 614 aa11.31□□□□□ -0.6
CACNA1A-242ENST00000637485 ERC1Q8IUD2 1116 aa11.31□□□□□ -0.6
CACNA1A-242ENST00000637485 CNTROBQ8N137 903 aa11.31□□□□□ -0.6
CACNA1A-242ENST00000637485 ABTB2Q8N961 1025 aa11.31□□□□□ -0.6
CACNA1A-242ENST00000637485 C16orf45Q96MC5 204 aaPredicted RBP11.31□□□□□ -0.6
CACNA1A-242ENST00000637485 OGFRQ9NZT2 677 aa11.31□□□□□ -0.6
CACNA1A-242ENST00000637485 POGZQ7Z3K3 1410 aa11.31□□□□□ -0.6
CACNA1A-242ENST00000637485 AEBP2Q6ZN18 517 aaPredicted RBP11.31□□□□□ -0.6
CACNA1A-242ENST00000637485 UVSSAQ2YD98 709 aa11.3□□□□□ -0.6
CACNA1A-242ENST00000637485 CEP57Q86XR8 500 aa11.3□□□□□ -0.6
CACNA1A-242ENST00000637485 NUP133Q8WUM0 1156 aa11.3□□□□□ -0.6
CACNA1A-242ENST00000637485 SUDS3Q9H7L9 328 aaPredicted RBP11.3□□□□□ -0.6
CACNA1A-242ENST00000637485 ME1P48163 572 aa11.3□□□□□ -0.6
CACNA1A-242ENST00000637485 SPATA32Q96LK8 384 aa11.3□□□□□ -0.6
CACNA1A-242ENST00000637485 ADGRL1O94910 1474 aa11.3□□□□□ -0.6
CACNA1A-242ENST00000637485 NSD3Q9BZ95 1437 aa11.3□□□□□ -0.6
CACNA1A-242ENST00000637485 KIF3CO14782 793 aa11.3□□□□□ -0.6
CACNA1A-242ENST00000637485 CCDC113Q9H0I3 377 aa11.3□□□□□ -0.6
CACNA1A-242ENST00000637485 NOB1Q9ULX3 412 aaKnown RBP11.3□□□□□ -0.6
CACNA1A-242ENST00000637485 MPHOSPH10O00566 681 aaKnown RBP11.3□□□□□ -0.6
CACNA1A-242ENST00000637485 FCHSD2O94868 740 aa11.3□□□□□ -0.6
CACNA1A-242ENST00000637485 RNF168Q8IYW5 571 aaPredicted RBP11.3□□□□□ -0.6
CACNA1A-242ENST00000637485 CLIP2Q9UDT6 1046 aa11.3□□□□□ -0.6
CACNA1A-242ENST00000637485 HIP1O00291 1037 aa11.29□□□□□ -0.6
CACNA1A-242ENST00000637485 EBAG9O00559 213 aa11.29□□□□□ -0.6
CACNA1A-242ENST00000637485 CCDC6Q16204 474 aa11.29□□□□□ -0.6
CACNA1A-242ENST00000637485 DDX46Q7L014 1031 aaKnown RBP11.29□□□□□ -0.6
CACNA1A-242ENST00000637485 FBF1Q8TES7 1133 aa11.29□□□□□ -0.6
CACNA1A-242ENST00000637485 CEP135Q66GS9 1140 aa11.29□□□□□ -0.6
CACNA1A-242ENST00000637485 C10orf67Q8IYJ2 551 aa11.29□□□□□ -0.6
CACNA1A-242ENST00000637485 BANK1Q8NDB2 785 aa11.29□□□□□ -0.6
CACNA1A-242ENST00000637485 NLRP2Q9NX02 1062 aa11.29□□□□□ -0.6
CACNA1A-242ENST00000637485 CCT4P50991 539 aaKnown RBP11.29□□□□□ -0.6
CACNA1A-242ENST00000637485 CFAP100Q494V2 611 aa11.29□□□□□ -0.6
CACNA1A-242ENST00000637485 CCDC171Q6TFL3 1326 aa11.29□□□□□ -0.6
CACNA1A-242ENST00000637485 NAA25Q14CX7 972 aa11.29□□□□□ -0.6
CACNA1A-242ENST00000637485 ARFGAP3Q9NP61 516 aa11.29□□□□□ -0.6
CACNA1A-242ENST00000637485 FAM184BQ9ULE4 1060 aa11.29□□□□□ -0.6
CACNA1A-242ENST00000637485 V9GYY5 206 aaPredicted RBP11.29□□□□□ -0.6
CACNA1A-242ENST00000637485 CD109Q6YHK3 1445 aa11.29□□□□□ -0.6
CACNA1A-242ENST00000637485 PAFAH1B1P43034 410 aa11.29□□□□□ -0.6
CACNA1A-242ENST00000637485 NAA15Q9BXJ9 866 aaKnown RBP11.29□□□□□ -0.6
CACNA1A-242ENST00000637485 UGGT2Q9NYU1 1516 aa11.28□□□□□ -0.6
CACNA1A-242ENST00000637485 ZFYP08048 801 aaPredicted RBP11.28□□□□□ -0.6
CACNA1A-242ENST00000637485 MVPQ14764 893 aaKnown RBP11.28□□□□□ -0.6
CACNA1A-242ENST00000637485 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.28□□□□□ -0.6
CACNA1A-242ENST00000637485 RAPGEF6Q8TEU7 1601 aa11.28□□□□□ -0.6
CACNA1A-242ENST00000637485 ANKRD18BA2A2Z9 1011 aa11.28□□□□□ -0.6
CACNA1A-242ENST00000637485 BCAR3O75815 825 aa11.28□□□□□ -0.6
CACNA1A-242ENST00000637485 FYB1O15117 783 aa11.28□□□□□ -0.6
CACNA1A-242ENST00000637485 RAPGEF3O95398 923 aa11.28□□□□□ -0.6
CACNA1A-242ENST00000637485 TUBB4AP04350 444 aa11.28□□□□□ -0.6
CACNA1A-242ENST00000637485 GNAI2P04899 355 aa11.28□□□□□ -0.6
CACNA1A-242ENST00000637485 CAPN2P17655 700 aa11.28□□□□□ -0.6
CACNA1A-242ENST00000637485 SLFN5Q08AF3 891 aa11.28□□□□□ -0.6
CACNA1A-242ENST00000637485 ATF7IPQ6VMQ6 1270 aa11.28□□□□□ -0.6
CACNA1A-242ENST00000637485 CEP112Q8N8E3 955 aa11.28□□□□□ -0.6
CACNA1A-242ENST00000637485 ITSN2Q9NZM3 1697 aa11.28□□□□□ -0.6
CACNA1A-242ENST00000637485 SNW1Q13573 536 aaKnown RBP11.28□□□□□ -0.6
CACNA1A-242ENST00000637485 ZNF397Q8NF99 534 aaPredicted RBP11.28□□□□□ -0.6
CACNA1A-242ENST00000637485 MYCBPQ99417 103 aaPredicted RBP11.28□□□□□ -0.6
CACNA1A-242ENST00000637485 NSRP1Q9H0G5 558 aaKnown RBP11.28□□□□□ -0.6
CACNA1A-242ENST00000637485 CCDC184Q52MB2 194 aa11.27□□□□□ -0.6
CACNA1A-242ENST00000637485 OTUD6BQ8N6M0 293 aa11.27□□□□□ -0.6
CACNA1A-242ENST00000637485 ZFP91Q96JP5 570 aaPredicted RBP11.27□□□□□ -0.6
CACNA1A-242ENST00000637485 ZSCAN31Q96LW9 406 aaPredicted RBP11.27□□□□□ -0.6
CACNA1A-242ENST00000637485 ANO10Q9NW15 660 aa11.27□□□□□ -0.6
CACNA1A-242ENST00000637485 SPA17Q15506 151 aa11.27□□□□□ -0.61
CACNA1A-242ENST00000637485 MRVI1Q9Y6F6 885 aa11.27□□□□□ -0.61
CACNA1A-242ENST00000637485 NUTM2GQ5VZR2 741 aa11.27□□□□□ -0.61
CACNA1A-242ENST00000637485 FMNL3Q8IVF7 1028 aa11.27□□□□□ -0.61
CACNA1A-242ENST00000637485 HOMEZQ8IX15 550 aa11.27□□□□□ -0.61
CACNA1A-242ENST00000637485 CYP46A1Q9Y6A2 500 aa11.27□□□□□ -0.61
CACNA1A-242ENST00000637485 CTTNBP2Q8WZ74 1663 aa11.27□□□□□ -0.61
CACNA1A-242ENST00000637485 LARP1BQ659C4 914 aaKnown RBP11.27□□□□□ -0.61
CACNA1A-242ENST00000637485 CCDC121Q6ZUS5 278 aa11.27□□□□□ -0.61
CACNA1A-242ENST00000637485 TSR2Q969E8 191 aaKnown RBP11.27□□□□□ -0.61
CACNA1A-242ENST00000637485 CEBPZQ03701 1054 aaKnown RBP11.26□□□□□ -0.61
CACNA1A-242ENST00000637485 HS1BP3Q53T59 392 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms