RNA–Protein interactions for RNA: ENST00000637243.1

CHRNA4-218, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 85 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-218ENST00000637243 TMC1Q8TDI8 760 aa8.36□□□□□ -1.07
CHRNA4-218ENST00000637243 ASAP1Q9ULH1 1129 aa8.36□□□□□ -1.07
CHRNA4-218ENST00000637243 ADAMTS7Q9UKP4 1686 aa8.36□□□□□ -1.07
CHRNA4-218ENST00000637243 CCDC88AQ3V6T2 1871 aa8.36□□□□□ -1.07
CHRNA4-218ENST00000637243 KDRP35968 1356 aa8.35□□□□□ -1.07
CHRNA4-218ENST00000637243 CGNL1Q0VF96 1302 aa8.35□□□□□ -1.07
CHRNA4-218ENST00000637243 PCDH11XQ9BZA7 1347 aa8.35□□□□□ -1.07
CHRNA4-218ENST00000637243 PCDH11YQ9BZA8 1340 aa8.35□□□□□ -1.07
CHRNA4-218ENST00000637243 ZNF831Q5JPB2 1677 aa8.35□□□□□ -1.07
CHRNA4-218ENST00000637243 GNPATO15228 680 aa8.35□□□□□ -1.07
CHRNA4-218ENST00000637243 FCHSD2O94868 740 aa8.35□□□□□ -1.07
CHRNA4-218ENST00000637243 NKX1-1Q15270 411 aaPredicted RBP8.35□□□□□ -1.07
CHRNA4-218ENST00000637243 DCAF5Q96JK2 942 aa8.35□□□□□ -1.07
CHRNA4-218ENST00000637243 SIN3AQ96ST3 1273 aa8.35□□□□□ -1.07
CHRNA4-218ENST00000637243 KDM6AO15550 1401 aaPredicted RBP8.35□□□□□ -1.07
CHRNA4-218ENST00000637243 RTL1A6NKG5 1358 aa8.35□□□□□ -1.07
CHRNA4-218ENST00000637243 PLEKHG2Q9H7P9 1386 aa8.35□□□□□ -1.07
CHRNA4-218ENST00000637243 POTECB2RU33 542 aa8.34□□□□□ -1.07
CHRNA4-218ENST00000637243 GYS1P13807 737 aa8.34□□□□□ -1.07
CHRNA4-218ENST00000637243 AMPHP49418 695 aa8.34□□□□□ -1.07
CHRNA4-218ENST00000637243 HSP90AB2PQ58FF8 381 aa8.34□□□□□ -1.07
CHRNA4-218ENST00000637243 HDGFL2Q7Z4V5 671 aaPredicted RBP8.34□□□□□ -1.07
CHRNA4-218ENST00000637243 SMARCC1Q92922 1105 aaPredicted RBP8.34□□□□□ -1.07
CHRNA4-218ENST00000637243 TATP17735 454 aaPredicted RBP8.33□□□□□ -1.08
CHRNA4-218ENST00000637243 TIAM2Q8IVF5 1701 aa8.33□□□□□ -1.08
CHRNA4-218ENST00000637243 RAPGEF4Q8WZA2 1011 aa8.33□□□□□ -1.08
CHRNA4-218ENST00000637243 ARHGEF1Q92888 912 aaKnown RBP8.33□□□□□ -1.08
CHRNA4-218ENST00000637243 ATG3Q9NT62 314 aa8.33□□□□□ -1.08
CHRNA4-218ENST00000637243 RNF181Q9P0P0 153 aa8.33□□□□□ -1.08
CHRNA4-218ENST00000637243 INSRP06213 1382 aa8.33□□□□□ -1.08
CHRNA4-218ENST00000637243 AFDNP55196 1824 aaKnown RBP8.32□□□□□ -1.08
CHRNA4-218ENST00000637243 FYB1O15117 783 aa8.32□□□□□ -1.08
CHRNA4-218ENST00000637243 CHRNA5P30532 468 aa8.32□□□□□ -1.08
CHRNA4-218ENST00000637243 RASSF7Q02833 373 aa8.32□□□□□ -1.08
CHRNA4-218ENST00000637243 DDR1Q08345 913 aa8.32□□□□□ -1.08
CHRNA4-218ENST00000637243 C16orf71Q8IYS4 520 aaPredicted RBP8.32□□□□□ -1.08
CHRNA4-218ENST00000637243 SMC1BQ8NDV3 1235 aa8.32□□□□□ -1.08
CHRNA4-218ENST00000637243 COG3Q96JB2 828 aa8.32□□□□□ -1.08
CHRNA4-218ENST00000637243 TERF2IPQ9NYB0 399 aa8.32□□□□□ -1.08
CHRNA4-218ENST00000637243 TNRC18O15417 2968 aaPredicted RBP8.32□□□□□ -1.08
CHRNA4-218ENST00000637243 DLEC1Q9Y238 1755 aa8.32□□□□□ -1.08
CHRNA4-218ENST00000637243 ANKRD26Q9UPS8 1709 aa8.32□□□□□ -1.08
CHRNA4-218ENST00000637243 VIRMAQ69YN4 1812 aaKnown RBP8.31□□□□□ -1.08
CHRNA4-218ENST00000637243 FOXN1O15353 648 aa8.31□□□□□ -1.08
CHRNA4-218ENST00000637243 ATP6V1AP38606 617 aa8.31□□□□□ -1.08
CHRNA4-218ENST00000637243 TMF1P82094 1093 aa8.31□□□□□ -1.08
CHRNA4-218ENST00000637243 TESK2Q96S53 571 aa8.31□□□□□ -1.08
CHRNA4-218ENST00000637243 GGNBP2Q9H3C7 697 aa8.31□□□□□ -1.08
CHRNA4-218ENST00000637243 TJP1Q07157 1748 aa8.31□□□□□ -1.08
CHRNA4-218ENST00000637243 KIF20BQ96Q89 1820 aa8.31□□□□□ -1.08
CHRNA4-218ENST00000637243 KDM2BQ8NHM5 1336 aa8.3□□□□□ -1.08
CHRNA4-218ENST00000637243 NRXN2Q9P2S2 1712 aa8.3□□□□□ -1.08
CHRNA4-218ENST00000637243 NLGN1Q8N2Q7 840 aa8.3□□□□□ -1.08
CHRNA4-218ENST00000637243 CCDC87Q9NVE4 849 aa8.3□□□□□ -1.08
CHRNA4-218ENST00000637243 PIM2Q9P1W9 311 aa8.3□□□□□ -1.08
CHRNA4-218ENST00000637243 SRP68Q9UHB9 627 aaKnown RBP8.3□□□□□ -1.08
CHRNA4-218ENST00000637243 POTEIP0CG38 1075 aa8.29□□□□□ -1.08
CHRNA4-218ENST00000637243 POTEJP0CG39 1038 aa8.29□□□□□ -1.08
CHRNA4-218ENST00000637243 FKBP8Q14318 412 aa8.29□□□□□ -1.08
CHRNA4-218ENST00000637243 DALRD3Q5D0E6 543 aaKnown RBP8.29□□□□□ -1.08
CHRNA4-218ENST00000637243 TRAPPC3LQ5T215 181 aa8.29□□□□□ -1.08
CHRNA4-218ENST00000637243 PUS7Q96PZ0 661 aaKnown RBP8.29□□□□□ -1.08
CHRNA4-218ENST00000637243 EMILIN1Q9Y6C2 1016 aa8.29□□□□□ -1.08
CHRNA4-218ENST00000637243 FLT4P35916 1363 aa8.29□□□□□ -1.08
CHRNA4-218ENST00000637243 DICER1Q9UPY3 1922 aaKnown RBP8.29□□□□□ -1.08
CHRNA4-218ENST00000637243 TONSLQ96HA7 1378 aa8.28□□□□□ -1.08
CHRNA4-218ENST00000637243 GLTPD2A6NH11 291 aa8.28□□□□□ -1.08
CHRNA4-218ENST00000637243 RPS6KA4O75676 772 aa8.28□□□□□ -1.08
CHRNA4-218ENST00000637243 PHKG2P15735 406 aa8.28□□□□□ -1.08
CHRNA4-218ENST00000637243 RC3H1Q5TC82 1133 aaKnown RBP8.28□□□□□ -1.08
CHRNA4-218ENST00000637243 TMOD3Q9NYL9 352 aa8.28□□□□□ -1.08
CHRNA4-218ENST00000637243 RTCBQ9Y3I0 505 aaKnown RBP8.28□□□□□ -1.08
CHRNA4-218ENST00000637243 SMG6Q86US8 1419 aaKnown RBP8.28□□□□□ -1.08
CHRNA4-218ENST00000637243 CNTNAP4Q9C0A0 1308 aa8.28□□□□□ -1.08
CHRNA4-218ENST00000637243 NFKBIEO00221 500 aa8.27□□□□□ -1.09
CHRNA4-218ENST00000637243 HMGB2P26583 209 aaKnown RBP8.27□□□□□ -1.09
CHRNA4-218ENST00000637243 TM4SF1P30408 202 aa8.27□□□□□ -1.09
CHRNA4-218ENST00000637243 EYA1Q99502 592 aa8.27□□□□□ -1.09
CHRNA4-218ENST00000637243 CARD11Q9BXL7 1154 aa8.27□□□□□ -1.09
CHRNA4-218ENST00000637243 MKRN1Q9UHC7 482 aaKnown RBP8.27□□□□□ -1.09
CHRNA4-218ENST00000637243 PARP3Q9Y6F1 533 aa8.27□□□□□ -1.09
CHRNA4-218ENST00000637243 ANKRD31Q8N7Z5 1873 aa8.27□□□□□ -1.09
CHRNA4-218ENST00000637243 FER1L6Q2WGJ9 1857 aa8.26□□□□□ -1.09
CHRNA4-218ENST00000637243 POLRMTO00411 1230 aaKnown RBP8.26□□□□□ -1.09
CHRNA4-218ENST00000637243 VEGFAP15692 232 aaPredicted RBP8.26□□□□□ -1.09
CHRNA4-218ENST00000637243 ADRA2BP18089 450 aa8.26□□□□□ -1.09
CHRNA4-218ENST00000637243 FAM161AQ3B820 660 aa8.26□□□□□ -1.09
CHRNA4-218ENST00000637243 USP42Q9H9J4 1324 aaKnown RBP8.26□□□□□ -1.09
CHRNA4-218ENST00000637243 CNTNAP1P78357 1384 aa8.25□□□□□ -1.09
CHRNA4-218ENST00000637243 KIF24Q5T7B8 1368 aa8.25□□□□□ -1.09
CHRNA4-218ENST00000637243 LMNB1P20700 586 aa8.25□□□□□ -1.09
CHRNA4-218ENST00000637243 RFC4P35249 363 aa8.25□□□□□ -1.09
CHRNA4-218ENST00000637243 NEUROD1Q13562 356 aa8.25□□□□□ -1.09
CHRNA4-218ENST00000637243 RBM42Q9BTD8 480 aaKnown RBP8.25□□□□□ -1.09
CHRNA4-218ENST00000637243 PRDM10Q9NQV6 1147 aa8.25□□□□□ -1.09
CHRNA4-218ENST00000637243 COL11A2P13942 1736 aaPredicted RBP8.25□□□□□ -1.09
CHRNA4-218ENST00000637243 ZC3H4Q9UPT8 1303 aaKnown RBP8.25□□□□□ -1.09
CHRNA4-218ENST00000637243 CARMIL3Q8ND23 1372 aa8.24□□□□□ -1.09
CHRNA4-218ENST00000637243 ZNF316A6NFI3 1004 aaPredicted RBP8.24□□□□□ -1.09
CHRNA4-218ENST00000637243 CRKLP46109 303 aaKnown RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms