RNA–Protein interactions for RNA: ENST00000637128.1

LINC00959-202, Transcript of HCG1648656, isoform CRA_a, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LINC00959, Length 826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-202ENST00000637128 PALLDQ8WX93 1383 aa16.95■□□□□ 0.3
LINC00959-202ENST00000637128 POLA2Q14181 598 aa16.95■□□□□ 0.3
LINC00959-202ENST00000637128 C1orf141Q5JVX7 400 aa16.95■□□□□ 0.3
LINC00959-202ENST00000637128 PHACTR3Q96KR7 559 aa16.95■□□□□ 0.3
LINC00959-202ENST00000637128 PRKRIP1Q9H875 184 aaPredicted RBP16.95■□□□□ 0.3
LINC00959-202ENST00000637128 ZNF827Q17R98 1081 aa16.94■□□□□ 0.3
LINC00959-202ENST00000637128 CHRDL2Q6WN34 429 aa16.94■□□□□ 0.3
LINC00959-202ENST00000637128 TMOD3Q9NYL9 352 aa16.94■□□□□ 0.3
LINC00959-202ENST00000637128 MRC1P22897 1456 aa16.93■□□□□ 0.3
LINC00959-202ENST00000637128 AKAP4Q5JQC9 854 aa16.93■□□□□ 0.3
LINC00959-202ENST00000637128 DCAF5Q96JK2 942 aa16.93■□□□□ 0.3
LINC00959-202ENST00000637128 LGR6Q9HBX8 967 aa16.93■□□□□ 0.3
LINC00959-202ENST00000637128 ASAP1Q9ULH1 1129 aa16.93■□□□□ 0.3
LINC00959-202ENST00000637128 NUDCQ9Y266 331 aa16.93■□□□□ 0.3
LINC00959-202ENST00000637128 PDGFDQ9GZP0 370 aaPredicted RBP16.92■□□□□ 0.3
LINC00959-202ENST00000637128 HSP90AB1P08238 724 aaKnown RBP16.91■□□□□ 0.3
LINC00959-202ENST00000637128 CCNL1Q9UK58 526 aaPredicted RBP16.91■□□□□ 0.3
LINC00959-202ENST00000637128 DLG5Q8TDM6 1919 aa16.91■□□□□ 0.3
LINC00959-202ENST00000637128 SIPA1L3O60292 1781 aaPredicted RBP16.91■□□□□ 0.3
LINC00959-202ENST00000637128 MAP3K5Q99683 1374 aa16.9■□□□□ 0.3
LINC00959-202ENST00000637128 NBPF14Q5TI25 921 aa16.9■□□□□ 0.3
LINC00959-202ENST00000637128 ATG3Q9NT62 314 aa16.9■□□□□ 0.3
LINC00959-202ENST00000637128 LRP5O75197 1615 aa16.89■□□□□ 0.29
LINC00959-202ENST00000637128 ERVV-2B6SEH9 535 aa16.89■□□□□ 0.29
LINC00959-202ENST00000637128 RNMTO43148 476 aaKnown RBP16.89■□□□□ 0.29
LINC00959-202ENST00000637128 CABP4P57796 275 aa16.89■□□□□ 0.29
LINC00959-202ENST00000637128 SLC27A3Q5K4L6 730 aa16.89■□□□□ 0.29
LINC00959-202ENST00000637128 C4BP0C0L5 1744 aa16.89■□□□□ 0.29
LINC00959-202ENST00000637128 QSER1Q2KHR3 1735 aa16.89■□□□□ 0.29
LINC00959-202ENST00000637128 SLC15A2Q16348 729 aa16.88■□□□□ 0.29
LINC00959-202ENST00000637128 NFATC2IPQ8NCF5 419 aa16.88■□□□□ 0.29
LINC00959-202ENST00000637128 STK32BQ9NY57 414 aa16.88■□□□□ 0.29
LINC00959-202ENST00000637128 COL5A3P25940 1745 aaPredicted RBP16.87■□□□□ 0.29
LINC00959-202ENST00000637128 TJP1Q07157 1748 aa16.87■□□□□ 0.29
LINC00959-202ENST00000637128 FCHSD2O94868 740 aa16.87■□□□□ 0.29
LINC00959-202ENST00000637128 GAS2L2Q8NHY3 880 aa16.87■□□□□ 0.29
LINC00959-202ENST00000637128 AKT1S1Q96B36 256 aa16.87■□□□□ 0.29
LINC00959-202ENST00000637128 CCDC184Q52MB2 194 aa16.86■□□□□ 0.29
LINC00959-202ENST00000637128 SLC4A9Q96Q91 983 aa16.86■□□□□ 0.29
LINC00959-202ENST00000637128 PLEKHF1Q96S99 279 aa16.86■□□□□ 0.29
LINC00959-202ENST00000637128 SLC52A2Q9HAB3 445 aa16.86■□□□□ 0.29
LINC00959-202ENST00000637128 UBR2Q8IWV8 1755 aa16.85■□□□□ 0.29
LINC00959-202ENST00000637128 UBR3Q6ZT12 1888 aa16.85■□□□□ 0.29
LINC00959-202ENST00000637128 LOC102724428A0A0B4J2F2 783 aa16.85■□□□□ 0.29
LINC00959-202ENST00000637128 SIK1P57059 783 aa16.85■□□□□ 0.29
LINC00959-202ENST00000637128 ITPK1Q13572 414 aa16.85■□□□□ 0.29
LINC00959-202ENST00000637128 IL17REQ8NFR9 667 aa16.85■□□□□ 0.29
LINC00959-202ENST00000637128 SMARCC1Q92922 1105 aaPredicted RBP16.85■□□□□ 0.29
LINC00959-202ENST00000637128 KCPQ6ZWJ8 1503 aa16.85■□□□□ 0.29
LINC00959-202ENST00000637128 ZNF831Q5JPB2 1677 aa16.85■□□□□ 0.29
LINC00959-202ENST00000637128 GNAT3A8MTJ3 354 aa16.84■□□□□ 0.29
LINC00959-202ENST00000637128 MYCNP04198 464 aaPredicted RBP16.84■□□□□ 0.29
LINC00959-202ENST00000637128 SLC39A6Q13433 755 aa16.84■□□□□ 0.29
LINC00959-202ENST00000637128 SMIM5Q71RC9 77 aa16.84■□□□□ 0.29
LINC00959-202ENST00000637128 AMIGO3Q86WK7 504 aa16.84■□□□□ 0.29
LINC00959-202ENST00000637128 LINC00116Q8NCU8 138 aa16.84■□□□□ 0.29
LINC00959-202ENST00000637128 DCTN1Q14203 1278 aa16.83■□□□□ 0.28
LINC00959-202ENST00000637128 PNPLA7Q6ZV29 1317 aa16.83■□□□□ 0.28
LINC00959-202ENST00000637128 CICQ96RK0 1608 aaPredicted RBP16.83■□□□□ 0.28
LINC00959-202ENST00000637128 CEMIPQ8WUJ3 1361 aa16.82■□□□□ 0.28
LINC00959-202ENST00000637128 PTCD1O75127 700 aaKnown RBP16.82■□□□□ 0.28
LINC00959-202ENST00000637128 MCM10Q7L590 875 aa16.82■□□□□ 0.28
LINC00959-202ENST00000637128 CCDC146Q8IYE0 955 aa16.82■□□□□ 0.28
LINC00959-202ENST00000637128 ZBTB7AO95365 584 aa16.81■□□□□ 0.28
LINC00959-202ENST00000637128 ATP6V1AP38606 617 aa16.81■□□□□ 0.28
LINC00959-202ENST00000637128 MYH14Q7Z406 1995 aaKnown RBP16.8■□□□□ 0.28
LINC00959-202ENST00000637128 TFCP2L1Q9NZI6 479 aa16.8■□□□□ 0.28
LINC00959-202ENST00000637128 ADAMTS8Q9UP79 889 aa16.79■□□□□ 0.28
LINC00959-202ENST00000637128 MAPK8IP3Q9UPT6 1336 aa16.78■□□□□ 0.28
LINC00959-202ENST00000637128 WDR43Q15061 677 aaKnown RBP eCLIP16.78■□□□□ 0.28
LINC00959-202ENST00000637128 THUMPD2Q9BTF0 503 aaKnown RBP16.78■□□□□ 0.28
LINC00959-202ENST00000637128 ANP32CO43423 234 aa16.77■□□□□ 0.28
LINC00959-202ENST00000637128 KCNQ3O43525 872 aa16.77■□□□□ 0.28
LINC00959-202ENST00000637128 TEFQ10587 303 aa16.77■□□□□ 0.28
LINC00959-202ENST00000637128 NFE2L2Q16236 605 aa16.77■□□□□ 0.28
LINC00959-202ENST00000637128 ATF5Q9Y2D1 282 aaPredicted RBP16.77■□□□□ 0.28
LINC00959-202ENST00000637128 RRP7AQ9Y3A4 280 aaKnown RBP16.77■□□□□ 0.28
LINC00959-202ENST00000637128 C4AP0C0L4 1744 aa16.76■□□□□ 0.27
LINC00959-202ENST00000637128 COL24A1Q17RW2 1714 aa16.76■□□□□ 0.27
LINC00959-202ENST00000637128 PHF14O94880 888 aa16.76■□□□□ 0.27
LINC00959-202ENST00000637128 COL23A1Q86Y22 540 aaPredicted RBP16.76■□□□□ 0.27
LINC00959-202ENST00000637128 AK7Q96M32 723 aa16.76■□□□□ 0.27
LINC00959-202ENST00000637128 KDM3BQ7LBC6 1761 aa16.76■□□□□ 0.27
LINC00959-202ENST00000637128 RTF1Q92541 710 aaKnown RBP16.75■□□□□ 0.27
LINC00959-202ENST00000637128 GNPATO15228 680 aa16.74■□□□□ 0.27
LINC00959-202ENST00000637128 NEFMP07197 916 aa16.74■□□□□ 0.27
LINC00959-202ENST00000637128 PTGER2P43116 358 aa16.74■□□□□ 0.27
LINC00959-202ENST00000637128 DNAJC10Q8IXB1 793 aa16.74■□□□□ 0.27
LINC00959-202ENST00000637128 ZNF496Q96IT1 587 aaPredicted RBP16.73■□□□□ 0.27
LINC00959-202ENST00000637128 SPON1Q9HCB6 807 aa16.73■□□□□ 0.27
LINC00959-202ENST00000637128 SENP3-EIF4A1A0A087X0R7 540 aa16.72■□□□□ 0.27
LINC00959-202ENST00000637128 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.72■□□□□ 0.27
LINC00959-202ENST00000637128 BTBD11A6QL63 1104 aa16.72■□□□□ 0.27
LINC00959-202ENST00000637128 TMPOP42166 694 aaKnown RBP16.72■□□□□ 0.27
LINC00959-202ENST00000637128 MSL1Q68DK7 614 aa16.72■□□□□ 0.27
LINC00959-202ENST00000637128 ZNF790Q6PG37 636 aa16.72■□□□□ 0.27
LINC00959-202ENST00000637128 RUNDC1Q96C34 613 aa16.72■□□□□ 0.27
LINC00959-202ENST00000637128 SGIP1Q9BQI5 828 aa16.72■□□□□ 0.27
LINC00959-202ENST00000637128 MTFR1LQ9H019 292 aa16.72■□□□□ 0.27
LINC00959-202ENST00000637128 MIS18AQ9NYP9 233 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms