RNA–Protein interactions for RNA: ENST00000636999.1

CACNA1D-220, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 5

Gene CACNA1D, Length 4,212 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-220ENST00000636999 ARID3AQ99856 593 aa9.32□□□□□ -0.92
CACNA1D-220ENST00000636999 SETBP1Q9Y6X0 1596 aa9.32□□□□□ -0.92
CACNA1D-220ENST00000636999 PCDH11XQ9BZA7 1347 aa9.32□□□□□ -0.92
CACNA1D-220ENST00000636999 PCDH11YQ9BZA8 1340 aa9.32□□□□□ -0.92
CACNA1D-220ENST00000636999 SRGAP3O43295 1099 aa9.32□□□□□ -0.92
CACNA1D-220ENST00000636999 ANO2Q9NQ90 1003 aa9.32□□□□□ -0.92
CACNA1D-220ENST00000636999 INSRP06213 1382 aa9.32□□□□□ -0.92
CACNA1D-220ENST00000636999 TRIM27P14373 513 aa9.32□□□□□ -0.92
CACNA1D-220ENST00000636999 ZRSR1Q15695 479 aaKnown RBP9.32□□□□□ -0.92
CACNA1D-220ENST00000636999 CCDC57Q2TAC2 916 aa9.32□□□□□ -0.92
CACNA1D-220ENST00000636999 CHD1LQ86WJ1 897 aa9.32□□□□□ -0.92
CACNA1D-220ENST00000636999 SMARCC1Q92922 1105 aaPredicted RBP9.32□□□□□ -0.92
CACNA1D-220ENST00000636999 ADGRL3Q9HAR2 1447 aa9.32□□□□□ -0.92
CACNA1D-220ENST00000636999 NCBP3Q53F19 620 aaKnown RBP9.32□□□□□ -0.92
CACNA1D-220ENST00000636999 NBPF6Q5VWK0 638 aa9.32□□□□□ -0.92
CACNA1D-220ENST00000636999 INTS3Q68E01 1043 aaKnown RBP9.32□□□□□ -0.92
CACNA1D-220ENST00000636999 ARHGAP45Q92619 1136 aa9.32□□□□□ -0.92
CACNA1D-220ENST00000636999 NBPF4Q96M43 638 aa9.32□□□□□ -0.92
CACNA1D-220ENST00000636999 FRMPD1Q5SYB0 1578 aa9.31□□□□□ -0.92
CACNA1D-220ENST00000636999 MCTP1Q6DN14 999 aa9.31□□□□□ -0.92
CACNA1D-220ENST00000636999 NFATC2IPQ8NCF5 419 aa9.31□□□□□ -0.92
CACNA1D-220ENST00000636999 LAMC1P11047 1609 aa9.31□□□□□ -0.92
CACNA1D-220ENST00000636999 CNNM1Q9NRU3 951 aa9.31□□□□□ -0.92
CACNA1D-220ENST00000636999 F6X3S4 739 aa9.31□□□□□ -0.92
CACNA1D-220ENST00000636999 ZPR1O75312 459 aa9.31□□□□□ -0.92
CACNA1D-220ENST00000636999 SYAP1Q96A49 352 aaPredicted RBP9.31□□□□□ -0.92
CACNA1D-220ENST00000636999 TBC1D2Q9BYX2 928 aa9.31□□□□□ -0.92
CACNA1D-220ENST00000636999 BABAM1Q9NWV8 329 aa9.31□□□□□ -0.92
CACNA1D-220ENST00000636999 RNMTO43148 476 aaKnown RBP9.3□□□□□ -0.92
CACNA1D-220ENST00000636999 MCM4P33991 863 aa9.3□□□□□ -0.92
CACNA1D-220ENST00000636999 SLC39A6Q13433 755 aa9.3□□□□□ -0.92
CACNA1D-220ENST00000636999 ARHGEF25Q86VW2 580 aa9.3□□□□□ -0.92
CACNA1D-220ENST00000636999 NOL10Q9BSC4 688 aaKnown RBP9.3□□□□□ -0.92
CACNA1D-220ENST00000636999 LRRCC1Q9C099 1032 aa9.3□□□□□ -0.92
CACNA1D-220ENST00000636999 PIK3C2BO00750 1634 aa9.3□□□□□ -0.92
CACNA1D-220ENST00000636999 VWDEQ8N2E2 1590 aa9.3□□□□□ -0.92
CACNA1D-220ENST00000636999 NEXMIFQ5QGS0 1516 aa9.3□□□□□ -0.92
CACNA1D-220ENST00000636999 RLBP1P12271 317 aa9.3□□□□□ -0.92
CACNA1D-220ENST00000636999 MPHOSPH8Q99549 860 aa9.3□□□□□ -0.92
CACNA1D-220ENST00000636999 MYD88Q99836 296 aa9.3□□□□□ -0.92
CACNA1D-220ENST00000636999 SOS1Q07889 1333 aaPredicted RBP9.3□□□□□ -0.92
CACNA1D-220ENST00000636999 SPATA31D1Q6ZQQ2 1576 aa9.3□□□□□ -0.92
CACNA1D-220ENST00000636999 C8orf58Q8NAV2 365 aa9.3□□□□□ -0.92
CACNA1D-220ENST00000636999 TOMM22Q9NS69 142 aa9.3□□□□□ -0.92
CACNA1D-220ENST00000636999 ISY1Q9ULR0 285 aaKnown RBP9.3□□□□□ -0.92
CACNA1D-220ENST00000636999 PREX1Q8TCU6 1659 aa9.3□□□□□ -0.92
CACNA1D-220ENST00000636999 RICTORQ6R327 1708 aa9.29□□□□□ -0.92
CACNA1D-220ENST00000636999 ZKSCAN1P17029 563 aaPredicted RBP9.29□□□□□ -0.92
CACNA1D-220ENST00000636999 KIF24Q5T7B8 1368 aa9.29□□□□□ -0.92
CACNA1D-220ENST00000636999 PI4KAP2A4QPH2 592 aa9.29□□□□□ -0.92
CACNA1D-220ENST00000636999 MRE11P49959 708 aa9.29□□□□□ -0.92
CACNA1D-220ENST00000636999 BRINP3Q76B58 766 aa9.29□□□□□ -0.92
CACNA1D-220ENST00000636999 PI4KAP1Q8N8J0 262 aa9.29□□□□□ -0.92
CACNA1D-220ENST00000636999 DEPDC5O75140 1603 aa9.29□□□□□ -0.92
CACNA1D-220ENST00000636999 CNTROBQ8N137 903 aa9.29□□□□□ -0.92
CACNA1D-220ENST00000636999 CEP126Q9P2H0 1117 aa9.29□□□□□ -0.92
CACNA1D-220ENST00000636999 PTCH1Q13635 1447 aa9.28□□□□□ -0.92
CACNA1D-220ENST00000636999 ANKRD13DQ6ZTN6 518 aa9.28□□□□□ -0.92
CACNA1D-220ENST00000636999 ACSBG1Q96GR2 724 aa9.28□□□□□ -0.92
CACNA1D-220ENST00000636999 SIL1Q9H173 461 aa9.28□□□□□ -0.92
CACNA1D-220ENST00000636999 VAMP4O75379 141 aa9.28□□□□□ -0.92
CACNA1D-220ENST00000636999 SEC24BO95487 1268 aa9.28□□□□□ -0.92
CACNA1D-220ENST00000636999 NUCB2P80303 420 aa9.28□□□□□ -0.92
CACNA1D-220ENST00000636999 DRC7Q8IY82 874 aa9.28□□□□□ -0.92
CACNA1D-220ENST00000636999 KIAA2012Q0VF49 1180 aa9.28□□□□□ -0.92
CACNA1D-220ENST00000636999 RNF20Q5VTR2 975 aa9.28□□□□□ -0.92
CACNA1D-220ENST00000636999 BICDL1Q6ZP65 573 aa9.28□□□□□ -0.92
CACNA1D-220ENST00000636999 KLHL34Q8N239 644 aa9.28□□□□□ -0.92
CACNA1D-220ENST00000636999 ZBTB3Q9H5J0 574 aa9.28□□□□□ -0.92
CACNA1D-220ENST00000636999 MAP3K2Q9Y2U5 619 aa9.28□□□□□ -0.92
CACNA1D-220ENST00000636999 ADAMTS13Q76LX8 1427 aa9.27□□□□□ -0.92
CACNA1D-220ENST00000636999 CHPF2Q9P2E5 772 aa9.27□□□□□ -0.92
CACNA1D-220ENST00000636999 RTL1A6NKG5 1358 aa9.27□□□□□ -0.92
CACNA1D-220ENST00000636999 RIMS1Q86UR5 1692 aaKnown RBP9.27□□□□□ -0.93
CACNA1D-220ENST00000636999 REREQ9P2R6 1566 aa9.27□□□□□ -0.93
CACNA1D-220ENST00000636999 KIAA0232Q92628 1395 aa9.27□□□□□ -0.93
CACNA1D-220ENST00000636999 A0A087WZG4 1122 aa9.27□□□□□ -0.93
CACNA1D-220ENST00000636999 ANXA1P04083 346 aa9.27□□□□□ -0.93
CACNA1D-220ENST00000636999 CCDC158Q5M9N0 1113 aa9.27□□□□□ -0.93
CACNA1D-220ENST00000636999 AMOTL1Q8IY63 956 aa9.27□□□□□ -0.93
CACNA1D-220ENST00000636999 TRIM35Q9UPQ4 493 aa9.27□□□□□ -0.93
CACNA1D-220ENST00000636999 CHL1O00533 1208 aa9.26□□□□□ -0.93
CACNA1D-220ENST00000636999 APPP05067 770 aa9.26□□□□□ -0.93
CACNA1D-220ENST00000636999 NEK4P51957 841 aa9.26□□□□□ -0.93
CACNA1D-220ENST00000636999 CHMP4CQ96CF2 233 aa9.26□□□□□ -0.93
CACNA1D-220ENST00000636999 AK7Q96M32 723 aa9.26□□□□□ -0.93
CACNA1D-220ENST00000636999 FSD1Q9BTV5 496 aa9.26□□□□□ -0.93
CACNA1D-220ENST00000636999 TRMT112Q9UI30 125 aaKnown RBP9.26□□□□□ -0.93
CACNA1D-220ENST00000636999 DLC1Q96QB1 1528 aa9.26□□□□□ -0.93
CACNA1D-220ENST00000636999 ATP6V1AP38606 617 aa9.26□□□□□ -0.93
CACNA1D-220ENST00000636999 CAVIN1Q6NZI2 390 aaKnown RBP9.26□□□□□ -0.93
CACNA1D-220ENST00000636999 TBC1D32Q96NH3 1257 aa9.26□□□□□ -0.93
CACNA1D-220ENST00000636999 GNL3LQ9NVN8 582 aaKnown RBP9.26□□□□□ -0.93
CACNA1D-220ENST00000636999 TBC1D2BQ9UPU7 963 aa9.26□□□□□ -0.93
CACNA1D-220ENST00000636999 CEP170BQ9Y4F5 1589 aaPredicted RBP9.26□□□□□ -0.93
CACNA1D-220ENST00000636999 HOXB7P09629 217 aa9.26□□□□□ -0.93
CACNA1D-220ENST00000636999 COPS6Q7L5N1 327 aa9.26□□□□□ -0.93
CACNA1D-220ENST00000636999 TSPYL6Q8N831 410 aa9.26□□□□□ -0.93
CACNA1D-220ENST00000636999 KIF1BPQ96EK5 621 aa9.26□□□□□ -0.93
CACNA1D-220ENST00000636999 USP21Q9UK80 565 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms