RNA–Protein interactions for RNA: ENST00000636903.1

SMARCA2-254, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5 BASIC

Gene SMARCA2, Length 2,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-254ENST00000636903 ZNF428Q96B54 188 aa17.38■□□□□ 0.37
SMARCA2-254ENST00000636903 SPG7Q9UQ90 795 aa17.38■□□□□ 0.37
SMARCA2-254ENST00000636903 VIRMAQ69YN4 1812 aaKnown RBP17.38■□□□□ 0.37
SMARCA2-254ENST00000636903 TOM1O60784 492 aa17.37■□□□□ 0.37
SMARCA2-254ENST00000636903 RGS3P49796 1198 aa17.36■□□□□ 0.37
SMARCA2-254ENST00000636903 BRPF1P55201 1214 aaPredicted RBP17.36■□□□□ 0.37
SMARCA2-254ENST00000636903 SLC4A10Q6U841 1118 aa17.36■□□□□ 0.37
SMARCA2-254ENST00000636903 PHAXQ9H814 394 aaKnown RBP17.36■□□□□ 0.37
SMARCA2-254ENST00000636903 IFNL2Q8IZJ0 200 aa17.36■□□□□ 0.37
SMARCA2-254ENST00000636903 HDGFL1Q5TGJ6 251 aa17.35■□□□□ 0.37
SMARCA2-254ENST00000636903 DDX19BQ9UMR2 479 aa17.35■□□□□ 0.37
SMARCA2-254ENST00000636903 PHLPP1O60346 1717 aa17.34■□□□□ 0.37
SMARCA2-254ENST00000636903 CENPQQ7L2Z9 268 aaPredicted RBP17.34■□□□□ 0.37
SMARCA2-254ENST00000636903 KAT6BQ8WYB5 2073 aa17.34■□□□□ 0.37
SMARCA2-254ENST00000636903 ZBTB40Q9NUA8 1239 aa17.34■□□□□ 0.37
SMARCA2-254ENST00000636903 RGS12O14924 1447 aa17.34■□□□□ 0.37
SMARCA2-254ENST00000636903 ABCC4O15439 1325 aa17.34■□□□□ 0.37
SMARCA2-254ENST00000636903 PRKCSHP14314 528 aaPredicted RBP17.33■□□□□ 0.37
SMARCA2-254ENST00000636903 IL2RBP14784 551 aa17.33■□□□□ 0.37
SMARCA2-254ENST00000636903 ZCRB1Q8TBF4 217 aaKnown RBP17.33■□□□□ 0.37
SMARCA2-254ENST00000636903 CARD10Q9BWT7 1032 aa17.33■□□□□ 0.37
SMARCA2-254ENST00000636903 AHDC1Q5TGY3 1603 aaPredicted RBP17.33■□□□□ 0.37
SMARCA2-254ENST00000636903 MS4A1P11836 297 aa17.33■□□□□ 0.36
SMARCA2-254ENST00000636903 PIP4K2AP48426 406 aaPredicted RBP17.33■□□□□ 0.36
SMARCA2-254ENST00000636903 SLC52A2Q9HAB3 445 aa17.33■□□□□ 0.36
SMARCA2-254ENST00000636903 CHPF2Q9P2E5 772 aa17.33■□□□□ 0.36
SMARCA2-254ENST00000636903 ZBTB7BO15156 539 aaPredicted RBP17.32■□□□□ 0.36
SMARCA2-254ENST00000636903 ARHGAP45Q92619 1136 aa17.32■□□□□ 0.36
SMARCA2-254ENST00000636903 STK31Q9BXU1 1019 aa17.32■□□□□ 0.36
SMARCA2-254ENST00000636903 MSH5O43196 834 aa17.32■□□□□ 0.36
SMARCA2-254ENST00000636903 PROSER3Q2NL68 480 aa17.32■□□□□ 0.36
SMARCA2-254ENST00000636903 OVOS2A0A0G2JMS6 1433 aa17.32■□□□□ 0.36
SMARCA2-254ENST00000636903 FKBP5Q13451 457 aaPredicted RBP17.31■□□□□ 0.36
SMARCA2-254ENST00000636903 FLIIQ13045 1269 aa17.31■□□□□ 0.36
SMARCA2-254ENST00000636903 CCDC30Q5VVM6 783 aa17.31■□□□□ 0.36
SMARCA2-254ENST00000636903 COL16A1Q07092 1604 aaPredicted RBP17.31■□□□□ 0.36
SMARCA2-254ENST00000636903 API5Q9BZZ5 524 aaKnown RBP17.3■□□□□ 0.36
SMARCA2-254ENST00000636903 ZNF790Q6PG37 636 aa17.3■□□□□ 0.36
SMARCA2-254ENST00000636903 GIGYF1O75420 1035 aaPredicted RBP17.29■□□□□ 0.36
SMARCA2-254ENST00000636903 ZNF496Q96IT1 587 aaPredicted RBP17.29■□□□□ 0.36
SMARCA2-254ENST00000636903 DCAF5Q96JK2 942 aa17.29■□□□□ 0.36
SMARCA2-254ENST00000636903 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.29■□□□□ 0.36
SMARCA2-254ENST00000636903 ABCC6O95255 1503 aa17.29■□□□□ 0.36
SMARCA2-254ENST00000636903 CABP4P57796 275 aa17.28■□□□□ 0.36
SMARCA2-254ENST00000636903 MEIS3Q99687 375 aa17.28■□□□□ 0.36
SMARCA2-254ENST00000636903 KDM3BQ7LBC6 1761 aa17.28■□□□□ 0.36
SMARCA2-254ENST00000636903 BABAM1Q9NWV8 329 aa17.27■□□□□ 0.36
SMARCA2-254ENST00000636903 EP400Q96L91 3159 aa17.27■□□□□ 0.36
SMARCA2-254ENST00000636903 SCN11AQ9UI33 1791 aa17.27■□□□□ 0.36
SMARCA2-254ENST00000636903 PCDH11XQ9BZA7 1347 aa17.27■□□□□ 0.35
SMARCA2-254ENST00000636903 PCDH11YQ9BZA8 1340 aa17.27■□□□□ 0.35
SMARCA2-254ENST00000636903 SIRT2Q8IXJ6 389 aa17.26■□□□□ 0.35
SMARCA2-254ENST00000636903 CCDC9Q9Y3X0 531 aaKnown RBP17.26■□□□□ 0.35
SMARCA2-254ENST00000636903 AAMPQ13685 434 aa17.26■□□□□ 0.35
SMARCA2-254ENST00000636903 C8orf37Q96NL8 207 aa17.26■□□□□ 0.35
SMARCA2-254ENST00000636903 USP16Q9Y5T5 823 aa17.26■□□□□ 0.35
SMARCA2-254ENST00000636903 PTCD1O75127 700 aaKnown RBP17.25■□□□□ 0.35
SMARCA2-254ENST00000636903 PKD1L3Q7Z443 1732 aa17.25■□□□□ 0.35
SMARCA2-254ENST00000636903 PTPRCP08575 1304 aa17.25■□□□□ 0.35
SMARCA2-254ENST00000636903 SIPA1L3O60292 1781 aaPredicted RBP17.25■□□□□ 0.35
SMARCA2-254ENST00000636903 MYL6BP14649 208 aa17.25■□□□□ 0.35
SMARCA2-254ENST00000636903 AIMP1Q12904 312 aaKnown RBP17.25■□□□□ 0.35
SMARCA2-254ENST00000636903 INTS3Q68E01 1043 aaKnown RBP17.25■□□□□ 0.35
SMARCA2-254ENST00000636903 PDZRN3Q9UPQ7 1066 aa17.25■□□□□ 0.35
SMARCA2-254ENST00000636903 RWDD1Q9H446 243 aaPredicted RBP17.24■□□□□ 0.35
SMARCA2-254ENST00000636903 A0A0G2JS52 829 aa17.24■□□□□ 0.35
SMARCA2-254ENST00000636903 COL22A1Q8NFW1 1626 aaPredicted RBP17.23■□□□□ 0.35
SMARCA2-254ENST00000636903 PI4KAP2A4QPH2 592 aa17.23■□□□□ 0.35
SMARCA2-254ENST00000636903 TTC5Q8N0Z6 440 aa17.23■□□□□ 0.35
SMARCA2-254ENST00000636903 PI4KAP1Q8N8J0 262 aa17.23■□□□□ 0.35
SMARCA2-254ENST00000636903 CERKQ8TCT0 537 aa17.23■□□□□ 0.35
SMARCA2-254ENST00000636903 ADAMTS7Q9UKP4 1686 aa17.23■□□□□ 0.35
SMARCA2-254ENST00000636903 HEG1Q9ULI3 1381 aa17.22■□□□□ 0.35
SMARCA2-254ENST00000636903 SHANK3Q9BYB0 1731 aa17.21■□□□□ 0.35
SMARCA2-254ENST00000636903 PARP4Q9UKK3 1724 aaKnown RBP17.21■□□□□ 0.35
SMARCA2-254ENST00000636903 COL14A1Q05707 1796 aaKnown RBP17.21■□□□□ 0.35
SMARCA2-254ENST00000636903 SYTL4Q96C24 671 aaPredicted RBP17.21■□□□□ 0.35
SMARCA2-254ENST00000636903 HSP90AB1P08238 724 aaKnown RBP17.2■□□□□ 0.34
SMARCA2-254ENST00000636903 PDIA6Q15084 440 aa17.2■□□□□ 0.34
SMARCA2-254ENST00000636903 APBB1O00213 710 aa17.2■□□□□ 0.34
SMARCA2-254ENST00000636903 ERICH6Q7L0X2 663 aa17.2■□□□□ 0.34
SMARCA2-254ENST00000636903 NGLY1Q96IV0 654 aa17.2■□□□□ 0.34
SMARCA2-254ENST00000636903 ASAP1Q9ULH1 1129 aa17.2■□□□□ 0.34
SMARCA2-254ENST00000636903 DBF4Q9UBU7 674 aaPredicted RBP17.19■□□□□ 0.34
SMARCA2-254ENST00000636903 C5P01031 1676 aa17.19■□□□□ 0.34
SMARCA2-254ENST00000636903 HSPA1LP34931 641 aa17.19■□□□□ 0.34
SMARCA2-254ENST00000636903 HDAC1Q13547 482 aaPredicted RBP17.19■□□□□ 0.34
SMARCA2-254ENST00000636903 PLCH1Q4KWH8 1693 aa17.18■□□□□ 0.34
SMARCA2-254ENST00000636903 HOXB7P09629 217 aa17.18■□□□□ 0.34
SMARCA2-254ENST00000636903 PDE4AP27815 886 aa17.18■□□□□ 0.34
SMARCA2-254ENST00000636903 LNPKQ9C0E8 428 aa17.18■□□□□ 0.34
SMARCA2-254ENST00000636903 PIGBQ92521 554 aa17.18■□□□□ 0.34
SMARCA2-254ENST00000636903 SPATA31A1Q5TZJ5 1347 aa17.17■□□□□ 0.34
SMARCA2-254ENST00000636903 EXOC5O00471 708 aa17.17■□□□□ 0.34
SMARCA2-254ENST00000636903 NKX1-1Q15270 411 aaPredicted RBP17.17■□□□□ 0.34
SMARCA2-254ENST00000636903 FMNL2Q96PY5 1086 aa17.17■□□□□ 0.34
SMARCA2-254ENST00000636903 ADCY9O60503 1353 aa17.17■□□□□ 0.34
SMARCA2-254ENST00000636903 CWF19L2Q2TBE0 894 aaKnown RBP17.16■□□□□ 0.34
SMARCA2-254ENST00000636903 ACSBG1Q96GR2 724 aa17.16■□□□□ 0.34
SMARCA2-254ENST00000636903 MAP3K2Q9Y2U5 619 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms