RNA–Protein interactions for RNA: ENST00000636861.1

CHD2-225, Transcript of chromodomain helicase DNA binding protein 2, human

TSL 5

Gene CHD2, Length 146 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD2-225	ENST00000636861	C9orf131	Q5VYM1	1079 aa		5.08	□□□□□ -1.6
CHD2-225	ENST00000636861	DCAF11	Q8TEB1	546 aa		5.08	□□□□□ -1.6
CHD2-225	ENST00000636861	CDC42BPG	Q6DT37	1551 aa		5.08	□□□□□ -1.6
CHD2-225	ENST00000636861	ROCK2	O75116	1388 aa	Known RBP	5.07	□□□□□ -1.6
CHD2-225	ENST00000636861	PLEKHG2	Q9H7P9	1386 aa		5.07	□□□□□ -1.6
CHD2-225	ENST00000636861	ROBO2	Q9HCK4	1378 aa		5.07	□□□□□ -1.6
CHD2-225	ENST00000636861	KIF15	Q9NS87	1388 aa		5.07	□□□□□ -1.6
CHD2-225	ENST00000636861	BTAF1	O14981	1849 aa		5.07	□□□□□ -1.6
CHD2-225	ENST00000636861	TRPM3	Q9HCF6	1732 aa	Predicted RBP	5.07	□□□□□ -1.6
CHD2-225	ENST00000636861	FRAT2	O75474	233 aa	Predicted RBP	5.07	□□□□□ -1.6
CHD2-225	ENST00000636861	GTF2E1	P29083	439 aa	Predicted RBP	5.07	□□□□□ -1.6
CHD2-225	ENST00000636861	RRP1	P56182	461 aa	Known RBP	5.07	□□□□□ -1.6
CHD2-225	ENST00000636861	HS1BP3	Q53T59	392 aa		5.07	□□□□□ -1.6
CHD2-225	ENST00000636861	MSL1	Q68DK7	614 aa		5.07	□□□□□ -1.6
CHD2-225	ENST00000636861	KIAA1211	Q6ZU35	1233 aa		5.07	□□□□□ -1.6
CHD2-225	ENST00000636861	STAC3	Q96MF2	364 aa		5.07	□□□□□ -1.6
CHD2-225	ENST00000636861	UPF2	Q9HAU5	1272 aa	Known RBP	5.07	□□□□□ -1.6
CHD2-225	ENST00000636861	KIF1A	Q12756	1690 aa		5.07	□□□□□ -1.6
CHD2-225	ENST00000636861	ALS2	Q96Q42	1657 aa		5.07	□□□□□ -1.6
CHD2-225	ENST00000636861	ZDBF2	Q9HCK1	2354 aa		5.07	□□□□□ -1.6
CHD2-225	ENST00000636861	CCDC18	Q5T9S5	1454 aa		5.07	□□□□□ -1.6
CHD2-225	ENST00000636861	EPG5	Q9HCE0	2579 aa		5.07	□□□□□ -1.6
CHD2-225	ENST00000636861	WNK3	Q9BYP7	1800 aa		5.07	□□□□□ -1.6
CHD2-225	ENST00000636861	ARFGEF1	Q9Y6D6	1849 aa		5.07	□□□□□ -1.6
CHD2-225	ENST00000636861	PIK3C2A	O00443	1686 aa		5.06	□□□□□ -1.6
CHD2-225	ENST00000636861	NHS	Q6T4R5	1651 aa		5.06	□□□□□ -1.6
CHD2-225	ENST00000636861	KDM2B	Q8NHM5	1336 aa		5.06	□□□□□ -1.6
CHD2-225	ENST00000636861	FSD2	A1L4K1	749 aa		5.06	□□□□□ -1.6
CHD2-225	ENST00000636861	CCDC66	A2RUB6	948 aa		5.06	□□□□□ -1.6
CHD2-225	ENST00000636861	POTEC	B2RU33	542 aa		5.06	□□□□□ -1.6
CHD2-225	ENST00000636861	POTEI	P0CG38	1075 aa		5.06	□□□□□ -1.6
CHD2-225	ENST00000636861	POTEJ	P0CG39	1038 aa		5.06	□□□□□ -1.6
CHD2-225	ENST00000636861	HSP90B1	P14625	803 aa	Known RBP	5.06	□□□□□ -1.6
CHD2-225	ENST00000636861	SLC20A2	Q08357	652 aa		5.06	□□□□□ -1.6
CHD2-225	ENST00000636861	AXDND1	Q5T1B0	1012 aa	Predicted RBP	5.06	□□□□□ -1.6
CHD2-225	ENST00000636861	CENPQ	Q7L2Z9	268 aa	Predicted RBP	5.06	□□□□□ -1.6
CHD2-225	ENST00000636861	ARID3A	Q99856	593 aa		5.06	□□□□□ -1.6
CHD2-225	ENST00000636861	C5orf42	Q9H799	3197 aa		5.06	□□□□□ -1.6
CHD2-225	ENST00000636861	CDH23	Q9H251	3354 aa		5.06	□□□□□ -1.6
CHD2-225	ENST00000636861	KIF13B	Q9NQT8	1826 aa		5.06	□□□□□ -1.6
CHD2-225	ENST00000636861	CCDC141	Q6ZP82	1450 aa		5.06	□□□□□ -1.6
CHD2-225	ENST00000636861	SPATA31E1	Q6ZUB1	1445 aa		5.06	□□□□□ -1.6
CHD2-225	ENST00000636861	INSR	P06213	1382 aa		5.05	□□□□□ -1.6
CHD2-225	ENST00000636861	EIF3A	Q14152	1382 aa	Known RBP	5.05	□□□□□ -1.6
CHD2-225	ENST00000636861	PASK	Q96RG2	1323 aa		5.05	□□□□□ -1.6
CHD2-225	ENST00000636861	KAT6B	Q8WYB5	2073 aa		5.05	□□□□□ -1.6
CHD2-225	ENST00000636861	OFD1	O75665	1012 aa		5.05	□□□□□ -1.6
CHD2-225	ENST00000636861	MCM5	P33992	734 aa		5.05	□□□□□ -1.6
CHD2-225	ENST00000636861	EIF4G2	P78344	907 aa	Known RBP eCLIP	5.05	□□□□□ -1.6
CHD2-225	ENST00000636861	IRX3	P78415	501 aa	Predicted RBP	5.05	□□□□□ -1.6
CHD2-225	ENST00000636861	MAP2K1	Q02750	393 aa	Predicted RBP	5.05	□□□□□ -1.6
CHD2-225	ENST00000636861	SKOR2	Q2VWA4	1001 aa	Predicted RBP	5.05	□□□□□ -1.6
CHD2-225	ENST00000636861	KRT28	Q7Z3Y7	464 aa		5.05	□□□□□ -1.6
CHD2-225	ENST00000636861	ZSCAN30	Q86W11	494 aa		5.05	□□□□□ -1.6
CHD2-225	ENST00000636861	FAM9B	Q8IZU0	186 aa		5.05	□□□□□ -1.6
CHD2-225	ENST00000636861	CCDC94	Q9BW85	323 aa	Predicted RBP	5.05	□□□□□ -1.6
CHD2-225	ENST00000636861	PRKRIP1	Q9H875	184 aa	Predicted RBP	5.05	□□□□□ -1.6
CHD2-225	ENST00000636861	STRN4	Q9NRL3	753 aa		5.05	□□□□□ -1.6
CHD2-225	ENST00000636861	CFDP1	Q9UEE9	299 aa	Predicted RBP	5.05	□□□□□ -1.6
CHD2-225	ENST00000636861	BCL9	O00512	1426 aa		5.05	□□□□□ -1.6
CHD2-225	ENST00000636861	SSH2	Q76I76	1423 aa		5.05	□□□□□ -1.6
CHD2-225	ENST00000636861	COL18A1	P39060	1754 aa		5.04	□□□□□ -1.6
CHD2-225	ENST00000636861	SYNGAP1	Q96PV0	1343 aa		5.04	□□□□□ -1.6
CHD2-225	ENST00000636861	WDR33	Q9C0J8	1336 aa	Known RBP	5.04	□□□□□ -1.6
CHD2-225	ENST00000636861	PRR36	Q9H6K5	1346 aa		5.04	□□□□□ -1.6
CHD2-225	ENST00000636861	PTMA	P06454	111 aa	Known RBP	5.04	□□□□□ -1.6
CHD2-225	ENST00000636861	PPP4R3B	Q5MIZ7	849 aa		5.04	□□□□□ -1.6
CHD2-225	ENST00000636861	DNTTIP2	Q5QJE6	756 aa	Known RBP	5.04	□□□□□ -1.6
CHD2-225	ENST00000636861	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	5.04	□□□□□ -1.6
CHD2-225	ENST00000636861	DNAJC2	Q99543	621 aa	Known RBP	5.04	□□□□□ -1.6
CHD2-225	ENST00000636861	CHMP4B	Q9H444	224 aa	Known RBP	5.04	□□□□□ -1.6
CHD2-225	ENST00000636861	GRPEL1	Q9HAV7	217 aa		5.04	□□□□□ -1.6
CHD2-225	ENST00000636861	IGSF5	Q9NSI5	407 aa		5.04	□□□□□ -1.6
CHD2-225	ENST00000636861	CCDC88A	Q3V6T2	1871 aa		5.04	□□□□□ -1.6
CHD2-225	ENST00000636861	LRPPRC	P42704	1394 aa	Known RBP	5.04	□□□□□ -1.6
CHD2-225	ENST00000636861	KIAA0232	Q92628	1395 aa		5.04	□□□□□ -1.6
CHD2-225	ENST00000636861	USP34	Q70CQ2	3546 aa		5.03	□□□□□ -1.6
CHD2-225	ENST00000636861	FASN	P49327	2511 aa	Known RBP	5.03	□□□□□ -1.6
CHD2-225	ENST00000636861	ANKRD11	Q6UB99	2663 aa	Predicted RBP	5.03	□□□□□ -1.6
CHD2-225	ENST00000636861	SPTBN4	Q9H254	2564 aa		5.03	□□□□□ -1.6
CHD2-225	ENST00000636861	NUTM2F	A1L443	756 aa		5.03	□□□□□ -1.6
CHD2-225	ENST00000636861	RASSF10	A6NK89	507 aa		5.03	□□□□□ -1.6
CHD2-225	ENST00000636861	CLGN	O14967	610 aa		5.03	□□□□□ -1.6
CHD2-225	ENST00000636861	XRCC6	P12956	609 aa	Known RBP eCLIP	5.03	□□□□□ -1.6
CHD2-225	ENST00000636861	FAM193A	P78312	1265 aa		5.03	□□□□□ -1.6
CHD2-225	ENST00000636861	HMGN5	P82970	282 aa	Known RBP	5.03	□□□□□ -1.6
CHD2-225	ENST00000636861	LARP1	Q6PKG0	1096 aa	Known RBP	5.03	□□□□□ -1.6
CHD2-225	ENST00000636861	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	5.03	□□□□□ -1.6
CHD2-225	ENST00000636861	CREBRF	Q8IUR6	639 aa		5.03	□□□□□ -1.6
CHD2-225	ENST00000636861	MARCH10	Q8NA82	808 aa	Predicted RBP	5.03	□□□□□ -1.6
CHD2-225	ENST00000636861	OTUD5	Q96G74	571 aa		5.03	□□□□□ -1.6
CHD2-225	ENST00000636861	MAST4	O15021	2626 aa		5.03	□□□□□ -1.6
CHD2-225	ENST00000636861	TIAM2	Q8IVF5	1701 aa		5.03	□□□□□ -1.6
CHD2-225	ENST00000636861	DCHS1	Q96JQ0	3298 aa		5.03	□□□□□ -1.6
CHD2-225	ENST00000636861	CCDC7	Q96M83	1385 aa		5.03	□□□□□ -1.6
CHD2-225	ENST00000636861	IBTK	Q9P2D0	1353 aa	Predicted RBP	5.03	□□□□□ -1.6
CHD2-225	ENST00000636861	USP54	Q70EL1	1684 aa		5.02	□□□□□ -1.61
CHD2-225	ENST00000636861	WDFY4	Q6ZS81	3184 aa		5.02	□□□□□ -1.61
CHD2-225	ENST00000636861	MAPK8IP3	Q9UPT6	1336 aa		5.02	□□□□□ -1.61
CHD2-225	ENST00000636861	KMT2B	Q9UMN6	2715 aa	Predicted RBP	5.02	□□□□□ -1.61

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