RNA–Protein interactions for RNA: ENST00000636667.1

UBE3A-225, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 5,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-225ENST00000636667 CDC25BP30305 580 aa2.26□□□□□ -2.05
UBE3A-225ENST00000636667 PDXDC2PQ6P474 469 aa2.26□□□□□ -2.05
UBE3A-225ENST00000636667 SGPP1Q9BX95 441 aa2.26□□□□□ -2.05
UBE3A-225ENST00000636667 LILRA1O75019 489 aa2.25□□□□□ -2.05
UBE3A-225ENST00000636667 RECKO95980 971 aa2.25□□□□□ -2.05
UBE3A-225ENST00000636667 SKIP12755 728 aa2.25□□□□□ -2.05
UBE3A-225ENST00000636667 ADD1P35611 737 aaKnown RBP2.25□□□□□ -2.05
UBE3A-225ENST00000636667 RBM25P49756 843 aaKnown RBP2.25□□□□□ -2.05
UBE3A-225ENST00000636667 TMCO4Q5TGY1 634 aa2.25□□□□□ -2.05
UBE3A-225ENST00000636667 ZNF511Q8NB15 262 aa2.25□□□□□ -2.05
UBE3A-225ENST00000636667 SIAH2O43255 324 aa2.25□□□□□ -2.05
UBE3A-225ENST00000636667 FMNL1O95466 1100 aaPredicted RBP2.25□□□□□ -2.05
UBE3A-225ENST00000636667 ZNF16P17020 682 aaPredicted RBP2.25□□□□□ -2.05
UBE3A-225ENST00000636667 GRNP28799 593 aaKnown RBP2.25□□□□□ -2.05
UBE3A-225ENST00000636667 SLC4A3P48751 1232 aa2.25□□□□□ -2.05
UBE3A-225ENST00000636667 CPLX2Q6PUV4 134 aaKnown RBP2.25□□□□□ -2.05
UBE3A-225ENST00000636667 TRPM4Q8TD43 1214 aa2.25□□□□□ -2.05
UBE3A-225ENST00000636667 KCNG4Q8TDN1 519 aa2.25□□□□□ -2.05
UBE3A-225ENST00000636667 KLF16Q9BXK1 252 aaPredicted RBP2.25□□□□□ -2.05
UBE3A-225ENST00000636667 CFHR5Q9BXR6 569 aa2.25□□□□□ -2.05
UBE3A-225ENST00000636667 OSBPL3Q9H4L5 887 aa2.25□□□□□ -2.05
UBE3A-225ENST00000636667 ANO2Q9NQ90 1003 aa2.25□□□□□ -2.05
UBE3A-225ENST00000636667 ACIN1Q9UKV3 1341 aaKnown RBP2.25□□□□□ -2.05
UBE3A-225ENST00000636667 TNFRSF10BO14763 440 aa2.25□□□□□ -2.05
UBE3A-225ENST00000636667 GGCXP38435 758 aa2.25□□□□□ -2.05
UBE3A-225ENST00000636667 ZNF211Q13398 564 aaPredicted RBP2.25□□□□□ -2.05
UBE3A-225ENST00000636667 PPM1NQ8N819 430 aa2.25□□□□□ -2.05
UBE3A-225ENST00000636667 CARD10Q9BWT7 1032 aa2.25□□□□□ -2.05
UBE3A-225ENST00000636667 LINC01559Q495D7 138 aa2.25□□□□□ -2.05
UBE3A-225ENST00000636667 PRIMPOLQ96LW4 560 aa2.25□□□□□ -2.05
UBE3A-225ENST00000636667 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP2.25□□□□□ -2.05
UBE3A-225ENST00000636667 SEMA3FQ13275 785 aa2.24□□□□□ -2.05
UBE3A-225ENST00000636667 TMPRSS4Q9NRS4 437 aa2.24□□□□□ -2.05
UBE3A-225ENST00000636667 IQSEC3Q9UPP2 1182 aaPredicted RBP2.24□□□□□ -2.05
UBE3A-225ENST00000636667 FCF1Q9Y324 198 aaKnown RBP2.24□□□□□ -2.05
UBE3A-225ENST00000636667 ANKMY2Q8IV38 441 aa2.24□□□□□ -2.05
UBE3A-225ENST00000636667 CXXC1Q9P0U4 656 aaPredicted RBP2.24□□□□□ -2.05
UBE3A-225ENST00000636667 A0A1W2PRU2 124 aa2.24□□□□□ -2.05
UBE3A-225ENST00000636667 RXRBP28702 533 aa2.24□□□□□ -2.05
UBE3A-225ENST00000636667 SERBP1Q8NC51 408 aaKnown RBP eCLIP2.24□□□□□ -2.05
UBE3A-225ENST00000636667 KRTAP4-7Q9BYR0 210 aa2.24□□□□□ -2.05
UBE3A-225ENST00000636667 WNT7AO00755 349 aa2.24□□□□□ -2.05
UBE3A-225ENST00000636667 BCS1LQ9Y276 419 aa2.24□□□□□ -2.05
UBE3A-225ENST00000636667 TLL2Q9Y6L7 1015 aa2.24□□□□□ -2.05
UBE3A-225ENST00000636667 RASA1P20936 1047 aa2.23□□□□□ -2.05
UBE3A-225ENST00000636667 FOXK2Q01167 660 aa2.23□□□□□ -2.05
UBE3A-225ENST00000636667 ZNF697Q5TEC3 545 aa2.23□□□□□ -2.05
UBE3A-225ENST00000636667 Q6ZNB5 142 aa2.23□□□□□ -2.05
UBE3A-225ENST00000636667 C1orf216Q8TAB5 229 aa2.23□□□□□ -2.05
UBE3A-225ENST00000636667 CARD14Q9BXL6 1004 aa2.23□□□□□ -2.05
UBE3A-225ENST00000636667 PAXBP1Q9Y5B6 917 aa2.23□□□□□ -2.05
UBE3A-225ENST00000636667 SMPD1P17405 629 aa2.23□□□□□ -2.05
UBE3A-225ENST00000636667 TRMT44Q8IYL2 757 aaKnown RBP2.23□□□□□ -2.05
UBE3A-225ENST00000636667 CCDC24Q8N4L8 307 aa2.23□□□□□ -2.05
UBE3A-225ENST00000636667 SNIP1Q8TAD8 396 aaKnown RBP2.23□□□□□ -2.05
UBE3A-225ENST00000636667 ZDHHC1Q8WTX9 485 aa2.23□□□□□ -2.05
UBE3A-225ENST00000636667 QTRT2Q9H974 415 aaKnown RBP2.23□□□□□ -2.05
UBE3A-225ENST00000636667 POTECB2RU33 542 aa2.23□□□□□ -2.05
UBE3A-225ENST00000636667 NPR3P17342 541 aa2.23□□□□□ -2.05
UBE3A-225ENST00000636667 SOX11P35716 441 aa2.23□□□□□ -2.05
UBE3A-225ENST00000636667 ERVK-9P63128 1117 aa2.23□□□□□ -2.05
UBE3A-225ENST00000636667 TBCELQ5QJ74 424 aa2.23□□□□□ -2.05
UBE3A-225ENST00000636667 ETNK1Q9HBU6 452 aa2.23□□□□□ -2.05
UBE3A-225ENST00000636667 GPSM3Q9Y4H4 160 aa2.23□□□□□ -2.05
UBE3A-225ENST00000636667 USP34Q70CQ2 3546 aa2.23□□□□□ -2.05
UBE3A-225ENST00000636667 ERVH48-1M5A8F1 160 aa2.23□□□□□ -2.05
UBE3A-225ENST00000636667 Q3C1V9 767 aa2.23□□□□□ -2.05
UBE3A-225ENST00000636667 RSPH4AQ5TD94 716 aa2.23□□□□□ -2.05
UBE3A-225ENST00000636667 MOCOSQ96EN8 888 aa2.23□□□□□ -2.05
UBE3A-225ENST00000636667 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP2.23□□□□□ -2.05
UBE3A-225ENST00000636667 THBS1P07996 1170 aa2.22□□□□□ -2.05
UBE3A-225ENST00000636667 RAD51AP2Q09MP3 1159 aa2.22□□□□□ -2.05
UBE3A-225ENST00000636667 INTS6LQ5JSJ4 861 aaKnown RBP2.22□□□□□ -2.05
UBE3A-225ENST00000636667 ZNF358Q9NW07 568 aa2.22□□□□□ -2.05
UBE3A-225ENST00000636667 CNTNAP5Q8WYK1 1306 aa2.22□□□□□ -2.05
UBE3A-225ENST00000636667 GPR182O15218 404 aa2.22□□□□□ -2.05
UBE3A-225ENST00000636667 ATP2B4P23634 1241 aa2.22□□□□□ -2.05
UBE3A-225ENST00000636667 CTC1Q2NKJ3 1217 aa2.22□□□□□ -2.05
UBE3A-225ENST00000636667 VMACQ2NL98 169 aa2.22□□□□□ -2.05
UBE3A-225ENST00000636667 FZD6O60353 706 aa2.22□□□□□ -2.05
UBE3A-225ENST00000636667 MRPL58Q14197 206 aaKnown RBP2.22□□□□□ -2.05
UBE3A-225ENST00000636667 CCDC27Q2M243 656 aa2.22□□□□□ -2.05
UBE3A-225ENST00000636667 ZNF787Q6DD87 383 aa2.22□□□□□ -2.05
UBE3A-225ENST00000636667 MRRFQ96E11 262 aaKnown RBP2.22□□□□□ -2.05
UBE3A-225ENST00000636667 FAM161BQ96MY7 647 aa2.22□□□□□ -2.05
UBE3A-225ENST00000636667 MKNK1Q9BUB5 465 aa2.22□□□□□ -2.05
UBE3A-225ENST00000636667 TSPAN10Q9H1Z9 355 aaPredicted RBP2.22□□□□□ -2.05
UBE3A-225ENST00000636667 AMOTL2Q9Y2J4 779 aa2.22□□□□□ -2.05
UBE3A-225ENST00000636667 PPM1GO15355 546 aaPredicted RBP2.22□□□□□ -2.05
UBE3A-225ENST00000636667 CCDC102BQ68D86 513 aa2.22□□□□□ -2.05
UBE3A-225ENST00000636667 ATCAYQ86WG3 371 aa2.22□□□□□ -2.05
UBE3A-225ENST00000636667 ZC3H4Q9UPT8 1303 aaKnown RBP2.22□□□□□ -2.05
UBE3A-225ENST00000636667 MAGEB6P1A0A0J9YX57 407 aa2.22□□□□□ -2.05
UBE3A-225ENST00000636667 IL2RAP01589 272 aa2.22□□□□□ -2.05
UBE3A-225ENST00000636667 EIF4G2P78344 907 aaKnown RBP eCLIP2.22□□□□□ -2.05
UBE3A-225ENST00000636667 GTF2IP78347 998 aa2.22□□□□□ -2.05
UBE3A-225ENST00000636667 ZNF784Q8NCA9 323 aaPredicted RBP2.22□□□□□ -2.05
UBE3A-225ENST00000636667 P4HBP07237 508 aaKnown RBP2.21□□□□□ -2.06
UBE3A-225ENST00000636667 SWI5Q1ZZU3 235 aa2.21□□□□□ -2.06
UBE3A-225ENST00000636667 TREML4Q6UXN2 200 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms