RNA–Protein interactions for RNA: ENST00000636652.1

CHRNA4-216, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 195 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-216ENST00000636652 NFATC2IPQ8NCF5 419 aa17.4■□□□□ 0.38
CHRNA4-216ENST00000636652 CDCA7LQ96GN5 454 aa17.4■□□□□ 0.38
CHRNA4-216ENST00000636652 SPINK5Q9NQ38 1064 aaPredicted RBP17.4■□□□□ 0.38
CHRNA4-216ENST00000636652 DOT1LQ8TEK3 1739 aa17.39■□□□□ 0.37
CHRNA4-216ENST00000636652 PRIM1P49642 420 aaKnown RBP17.39■□□□□ 0.37
CHRNA4-216ENST00000636652 TRMT2AQ8IZ69 625 aaKnown RBP17.39■□□□□ 0.37
CHRNA4-216ENST00000636652 TSPYL4Q9UJ04 414 aa17.39■□□□□ 0.37
CHRNA4-216ENST00000636652 LAS1LQ9Y4W2 734 aaKnown RBP17.39■□□□□ 0.37
CHRNA4-216ENST00000636652 BRWD3Q6RI45 1802 aa17.39■□□□□ 0.37
CHRNA4-216ENST00000636652 BTBD11A6QL63 1104 aa17.38■□□□□ 0.37
CHRNA4-216ENST00000636652 FAM182BQ5T319 152 aa17.38■□□□□ 0.37
CHRNA4-216ENST00000636652 MBIPQ9NS73 344 aa17.38■□□□□ 0.37
CHRNA4-216ENST00000636652 FANCIQ9NVI1 1328 aa17.38■□□□□ 0.37
CHRNA4-216ENST00000636652 SIPA1L3O60292 1781 aaPredicted RBP17.38■□□□□ 0.37
CHRNA4-216ENST00000636652 PIGBQ92521 554 aa17.37■□□□□ 0.37
CHRNA4-216ENST00000636652 SYTL4Q96C24 671 aaPredicted RBP17.37■□□□□ 0.37
CHRNA4-216ENST00000636652 ACSBG1Q96GR2 724 aa17.37■□□□□ 0.37
CHRNA4-216ENST00000636652 NHSQ6T4R5 1651 aa17.36■□□□□ 0.37
CHRNA4-216ENST00000636652 DUSP27Q5VZP5 1158 aa17.36■□□□□ 0.37
CHRNA4-216ENST00000636652 TSR2Q969E8 191 aaKnown RBP17.36■□□□□ 0.37
CHRNA4-216ENST00000636652 MIS18AQ9NYP9 233 aa17.36■□□□□ 0.37
CHRNA4-216ENST00000636652 VIRMAQ69YN4 1812 aaKnown RBP17.35■□□□□ 0.37
CHRNA4-216ENST00000636652 KCNQ2O43526 872 aa17.34■□□□□ 0.37
CHRNA4-216ENST00000636652 PAPPAQ13219 1627 aa17.34■□□□□ 0.37
CHRNA4-216ENST00000636652 ZNF790Q6PG37 636 aa17.34■□□□□ 0.37
CHRNA4-216ENST00000636652 TTC5Q8N0Z6 440 aa17.34■□□□□ 0.37
CHRNA4-216ENST00000636652 BCL11BQ9C0K0 894 aaPredicted RBP17.34■□□□□ 0.37
CHRNA4-216ENST00000636652 KDM3BQ7LBC6 1761 aa17.33■□□□□ 0.37
CHRNA4-216ENST00000636652 ATG3Q9NT62 314 aa17.33■□□□□ 0.36
CHRNA4-216ENST00000636652 KCNQ3O43525 872 aa17.32■□□□□ 0.36
CHRNA4-216ENST00000636652 EIF4A1P60842 406 aaKnown RBP17.32■□□□□ 0.36
CHRNA4-216ENST00000636652 SLC39A6Q13433 755 aa17.32■□□□□ 0.36
CHRNA4-216ENST00000636652 ITGB4P16144 1822 aa17.32■□□□□ 0.36
CHRNA4-216ENST00000636652 SMARCC1Q92922 1105 aaPredicted RBP17.31■□□□□ 0.36
CHRNA4-216ENST00000636652 ASAP1Q9ULH1 1129 aa17.31■□□□□ 0.36
CHRNA4-216ENST00000636652 SOS1Q07889 1333 aaPredicted RBP17.3■□□□□ 0.36
CHRNA4-216ENST00000636652 EXOSC9Q06265 439 aaKnown RBP17.3■□□□□ 0.36
CHRNA4-216ENST00000636652 FMNL2Q96PY5 1086 aa17.3■□□□□ 0.36
CHRNA4-216ENST00000636652 KCPQ6ZWJ8 1503 aa17.3■□□□□ 0.36
CHRNA4-216ENST00000636652 HEG1Q9ULI3 1381 aa17.29■□□□□ 0.36
CHRNA4-216ENST00000636652 SBF2Q86WG5 1849 aa17.29■□□□□ 0.36
CHRNA4-216ENST00000636652 TRIM37O94972 964 aa17.29■□□□□ 0.36
CHRNA4-216ENST00000636652 CT47B1P0C2W7 299 aaPredicted RBP17.29■□□□□ 0.36
CHRNA4-216ENST00000636652 PTF1AQ7RTS3 328 aa17.29■□□□□ 0.36
CHRNA4-216ENST00000636652 ZNF496Q96IT1 587 aaPredicted RBP17.29■□□□□ 0.36
CHRNA4-216ENST00000636652 PALLDQ8WX93 1383 aa17.28■□□□□ 0.36
CHRNA4-216ENST00000636652 HOXB7P09629 217 aa17.28■□□□□ 0.36
CHRNA4-216ENST00000636652 C8orf58Q8NAV2 365 aa17.28■□□□□ 0.36
CHRNA4-216ENST00000636652 UBR2Q8IWV8 1755 aa17.28■□□□□ 0.36
CHRNA4-216ENST00000636652 GIGYF1O75420 1035 aaPredicted RBP17.26■□□□□ 0.35
CHRNA4-216ENST00000636652 SNRPA1P09661 255 aaKnown RBP17.26■□□□□ 0.35
CHRNA4-216ENST00000636652 KRT24Q2M2I5 525 aa17.26■□□□□ 0.35
CHRNA4-216ENST00000636652 TWISTNBQ3B726 338 aaPredicted RBP17.26■□□□□ 0.35
CHRNA4-216ENST00000636652 VSIG10Q8N0Z9 540 aa17.26■□□□□ 0.35
CHRNA4-216ENST00000636652 BTAF1O14981 1849 aa17.26■□□□□ 0.35
CHRNA4-216ENST00000636652 PTCD1O75127 700 aaKnown RBP17.25■□□□□ 0.35
CHRNA4-216ENST00000636652 CENPBP07199 599 aaPredicted RBP17.25■□□□□ 0.35
CHRNA4-216ENST00000636652 TSPYL6Q8N831 410 aa17.25■□□□□ 0.35
CHRNA4-216ENST00000636652 ZNF428Q96B54 188 aa17.25■□□□□ 0.35
CHRNA4-216ENST00000636652 LOC102724428A0A0B4J2F2 783 aa17.24■□□□□ 0.35
CHRNA4-216ENST00000636652 VAMP4O75379 141 aa17.24■□□□□ 0.35
CHRNA4-216ENST00000636652 SIK1P57059 783 aa17.24■□□□□ 0.35
CHRNA4-216ENST00000636652 RBM42Q9BTD8 480 aaKnown RBP17.24■□□□□ 0.35
CHRNA4-216ENST00000636652 CHMP4AQ9BY43 222 aa17.24■□□□□ 0.35
CHRNA4-216ENST00000636652 ELL2O00472 640 aaPredicted RBP17.23■□□□□ 0.35
CHRNA4-216ENST00000636652 TEX13AQ9BXU3 409 aaPredicted RBP17.23■□□□□ 0.35
CHRNA4-216ENST00000636652 SLC4A9Q96Q91 983 aa17.22■□□□□ 0.35
CHRNA4-216ENST00000636652 CICQ96RK0 1608 aaPredicted RBP17.21■□□□□ 0.35
CHRNA4-216ENST00000636652 EP400Q96L91 3159 aa17.21■□□□□ 0.35
CHRNA4-216ENST00000636652 ZNF831Q5JPB2 1677 aa17.21■□□□□ 0.35
CHRNA4-216ENST00000636652 PLSCR1O15162 318 aa17.21■□□□□ 0.35
CHRNA4-216ENST00000636652 APBA3O96018 575 aa17.21■□□□□ 0.35
CHRNA4-216ENST00000636652 TNS1Q9HBL0 1735 aaKnown RBP17.21■□□□□ 0.35
CHRNA4-216ENST00000636652 PRAMEF22A3QJZ6 481 aa17.2■□□□□ 0.34
CHRNA4-216ENST00000636652 HDGFL1Q5TGJ6 251 aa17.2■□□□□ 0.34
CHRNA4-216ENST00000636652 ATP6V1AP38606 617 aa17.19■□□□□ 0.34
CHRNA4-216ENST00000636652 SF3B2Q13435 895 aaKnown RBP17.19■□□□□ 0.34
CHRNA4-216ENST00000636652 ALDH1L2Q3SY69 923 aa17.19■□□□□ 0.34
CHRNA4-216ENST00000636652 CCDC30Q5VVM6 783 aa17.19■□□□□ 0.34
CHRNA4-216ENST00000636652 CCDC125Q86Z20 511 aa17.19■□□□□ 0.34
CHRNA4-216ENST00000636652 DNAJC10Q8IXB1 793 aa17.19■□□□□ 0.34
CHRNA4-216ENST00000636652 CCNL1Q9UK58 526 aaPredicted RBP17.19■□□□□ 0.34
CHRNA4-216ENST00000636652 RCAN3Q9UKA8 241 aa17.19■□□□□ 0.34
CHRNA4-216ENST00000636652 KAT6BQ8WYB5 2073 aa17.19■□□□□ 0.34
CHRNA4-216ENST00000636652 ERBB4Q15303 1308 aa17.19■□□□□ 0.34
CHRNA4-216ENST00000636652 LY75O60449 1722 aa17.18■□□□□ 0.34
CHRNA4-216ENST00000636652 LAMB4A4D0S4 1761 aa17.18■□□□□ 0.34
CHRNA4-216ENST00000636652 C5P01031 1676 aa17.18■□□□□ 0.34
CHRNA4-216ENST00000636652 STARD3NLO95772 234 aa17.18■□□□□ 0.34
CHRNA4-216ENST00000636652 RARSP54136 660 aaKnown RBP17.18■□□□□ 0.34
CHRNA4-216ENST00000636652 SLC27A3Q5K4L6 730 aa17.18■□□□□ 0.34
CHRNA4-216ENST00000636652 USP16Q9Y5T5 823 aa17.18■□□□□ 0.34
CHRNA4-216ENST00000636652 EIF2S2P20042 333 aaKnown RBP17.17■□□□□ 0.34
CHRNA4-216ENST00000636652 HMGB2P26583 209 aaKnown RBP17.17■□□□□ 0.34
CHRNA4-216ENST00000636652 TJP1Q07157 1748 aa17.17■□□□□ 0.34
CHRNA4-216ENST00000636652 ITPK1Q13572 414 aa17.17■□□□□ 0.34
CHRNA4-216ENST00000636652 RGPD3A6NKT7 1758 aaPredicted RBP17.17■□□□□ 0.34
CHRNA4-216ENST00000636652 RGPD4Q7Z3J3 1758 aa17.17■□□□□ 0.34
CHRNA4-216ENST00000636652 CYP19A1P11511 503 aaPredicted RBP17.16■□□□□ 0.34
CHRNA4-216ENST00000636652 BAG6P46379 1132 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms