RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 CEP126Q9P2H0 1117 aa20.87■□□□□ 0.93
CACNA1A-227ENST00000636549 HIP1O00291 1037 aa20.87■□□□□ 0.93
CACNA1A-227ENST00000636549 FILIP1Q7Z7B0 1213 aa20.87■□□□□ 0.93
CACNA1A-227ENST00000636549 ZSCAN25Q6NSZ9 544 aa20.86■□□□□ 0.93
CACNA1A-227ENST00000636549 STARD3NLO95772 234 aa20.86■□□□□ 0.93
CACNA1A-227ENST00000636549 ZFP91Q96JP5 570 aaPredicted RBP20.86■□□□□ 0.93
CACNA1A-227ENST00000636549 APBB1IPQ7Z5R6 666 aaPredicted RBP20.86■□□□□ 0.93
CACNA1A-227ENST00000636549 CASTP20810 708 aaKnown RBP20.86■□□□□ 0.93
CACNA1A-227ENST00000636549 BOLA2Q9H3K6 86 aa20.86■□□□□ 0.93
CACNA1A-227ENST00000636549 PABPN1LA6NDY0 278 aaKnown RBP20.86■□□□□ 0.93
CACNA1A-227ENST00000636549 LARP1Q6PKG0 1096 aaKnown RBP20.86■□□□□ 0.93
CACNA1A-227ENST00000636549 SPATA32Q96LK8 384 aa20.86■□□□□ 0.93
CACNA1A-227ENST00000636549 ARHGAP5Q13017 1502 aa20.85■□□□□ 0.93
CACNA1A-227ENST00000636549 PRPF4BQ13523 1007 aaKnown RBP20.85■□□□□ 0.93
CACNA1A-227ENST00000636549 CWC15Q9P013 229 aaKnown RBP20.85■□□□□ 0.93
CACNA1A-227ENST00000636549 CIZ1Q9ULV3 898 aaPredicted RBP20.85■□□□□ 0.93
CACNA1A-227ENST00000636549 LUC7LQ9NQ29 371 aaKnown RBP20.85■□□□□ 0.93
CACNA1A-227ENST00000636549 CNTLNQ9NXG0 1405 aa20.84■□□□□ 0.93
CACNA1A-227ENST00000636549 SRCIN1Q9C0H9 1055 aa20.84■□□□□ 0.93
CACNA1A-227ENST00000636549 RBM25P49756 843 aaKnown RBP20.84■□□□□ 0.93
CACNA1A-227ENST00000636549 MCM10Q7L590 875 aa20.84■□□□□ 0.93
CACNA1A-227ENST00000636549 FERMT3Q86UX7 667 aa20.84■□□□□ 0.93
CACNA1A-227ENST00000636549 TRAK2O60296 914 aa20.84■□□□□ 0.93
CACNA1A-227ENST00000636549 EPB41L2O43491 1005 aaKnown RBP20.83■□□□□ 0.93
CACNA1A-227ENST00000636549 CACNA2D4Q7Z3S7 1137 aa20.83■□□□□ 0.93
CACNA1A-227ENST00000636549 STAC3Q96MF2 364 aa20.83■□□□□ 0.93
CACNA1A-227ENST00000636549 DACH1Q9UI36 760 aa20.83■□□□□ 0.93
CACNA1A-227ENST00000636549 PICALMQ13492 652 aa20.83■□□□□ 0.93
CACNA1A-227ENST00000636549 PANK2Q9BZ23 570 aa20.83■□□□□ 0.93
CACNA1A-227ENST00000636549 TRMT112Q9UI30 125 aaKnown RBP20.83■□□□□ 0.93
CACNA1A-227ENST00000636549 SLC12A5Q9H2X9 1139 aa20.83■□□□□ 0.92
CACNA1A-227ENST00000636549 CSPG5O95196 566 aa20.83■□□□□ 0.92
CACNA1A-227ENST00000636549 CCDC91Q7Z6B0 441 aa20.83■□□□□ 0.92
CACNA1A-227ENST00000636549 GJC1P36383 396 aa20.83■□□□□ 0.92
CACNA1A-227ENST00000636549 TCERG1LQ5VWI1 586 aa20.82■□□□□ 0.92
CACNA1A-227ENST00000636549 THUMPD2Q9BTF0 503 aaKnown RBP20.82■□□□□ 0.92
CACNA1A-227ENST00000636549 JMYQ8N9B5 988 aa20.82■□□□□ 0.92
CACNA1A-227ENST00000636549 SYCP3Q8IZU3 236 aa20.82■□□□□ 0.92
CACNA1A-227ENST00000636549 IMMTQ16891 758 aaKnown RBP20.81■□□□□ 0.92
CACNA1A-227ENST00000636549 DDX23Q9BUQ8 820 aaKnown RBP20.81■□□□□ 0.92
CACNA1A-227ENST00000636549 PIP4K2AP48426 406 aaPredicted RBP20.81■□□□□ 0.92
CACNA1A-227ENST00000636549 IQSEC3Q9UPP2 1182 aaPredicted RBP20.81■□□□□ 0.92
CACNA1A-227ENST00000636549 NLRP5P59047 1200 aa20.81■□□□□ 0.92
CACNA1A-227ENST00000636549 CCT2P78371 535 aaKnown RBP20.81■□□□□ 0.92
CACNA1A-227ENST00000636549 SP4Q02446 784 aa20.81■□□□□ 0.92
CACNA1A-227ENST00000636549 ANKLE2Q86XL3 938 aa20.81■□□□□ 0.92
CACNA1A-227ENST00000636549 CCDC8Q9H0W5 538 aaPredicted RBP20.81■□□□□ 0.92
CACNA1A-227ENST00000636549 ZNF652Q9Y2D9 606 aa20.81■□□□□ 0.92
CACNA1A-227ENST00000636549 PRC1O43663 620 aa20.8■□□□□ 0.92
CACNA1A-227ENST00000636549 BLOC1S2Q6QNY1 142 aa20.8■□□□□ 0.92
CACNA1A-227ENST00000636549 ZBTB21Q9ULJ3 1066 aa20.8■□□□□ 0.92
CACNA1A-227ENST00000636549 TRERF1Q96PN7 1200 aa20.8■□□□□ 0.92
CACNA1A-227ENST00000636549 RFX1P22670 979 aa20.8■□□□□ 0.92
CACNA1A-227ENST00000636549 RABEP1Q15276 862 aa20.8■□□□□ 0.92
CACNA1A-227ENST00000636549 CFAP100Q494V2 611 aa20.8■□□□□ 0.92
CACNA1A-227ENST00000636549 ZBTB3Q9H5J0 574 aa20.8■□□□□ 0.92
CACNA1A-227ENST00000636549 PPP1R12BO60237 982 aaPredicted RBP20.79■□□□□ 0.92
CACNA1A-227ENST00000636549 CCDC83Q8IWF9 413 aa20.79■□□□□ 0.92
CACNA1A-227ENST00000636549 JAG2Q9Y219 1238 aa20.79■□□□□ 0.92
CACNA1A-227ENST00000636549 EXOC6BQ9Y2D4 811 aa20.79■□□□□ 0.92
CACNA1A-227ENST00000636549 RFC4P35249 363 aa20.79■□□□□ 0.92
CACNA1A-227ENST00000636549 TDRD12Q587J7 1177 aaKnown RBP20.78■□□□□ 0.92
CACNA1A-227ENST00000636549 ZNF397Q8NF99 534 aaPredicted RBP20.78■□□□□ 0.92
CACNA1A-227ENST00000636549 VEZTQ9HBM0 779 aa20.78■□□□□ 0.92
CACNA1A-227ENST00000636549 INCENPQ9NQS7 918 aa20.78■□□□□ 0.92
CACNA1A-227ENST00000636549 DNAI2Q9GZS0 605 aa20.78■□□□□ 0.92
CACNA1A-227ENST00000636549 NAPBQ9H115 298 aa20.78■□□□□ 0.92
CACNA1A-227ENST00000636549 TSG101Q99816 390 aa20.77■□□□□ 0.92
CACNA1A-227ENST00000636549 SSX2IPQ9Y2D8 614 aa20.77■□□□□ 0.92
CACNA1A-227ENST00000636549 FANCD2Q9BXW9 1451 aa20.77■□□□□ 0.92
CACNA1A-227ENST00000636549 CADPSQ9ULU8 1353 aa20.77■□□□□ 0.92
CACNA1A-227ENST00000636549 SIRT1Q96EB6 747 aa20.77■□□□□ 0.92
CACNA1A-227ENST00000636549 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.77■□□□□ 0.92
CACNA1A-227ENST00000636549 LETM1O95202 739 aaPredicted RBP20.77■□□□□ 0.91
CACNA1A-227ENST00000636549 C8orf37Q96NL8 207 aa20.76■□□□□ 0.91
CACNA1A-227ENST00000636549 STAMBPO95630 424 aa20.76■□□□□ 0.91
CACNA1A-227ENST00000636549 PRKCSHP14314 528 aaPredicted RBP20.76■□□□□ 0.91
CACNA1A-227ENST00000636549 TMEM110-MUSTN1A8MSY1 372 aa20.76■□□□□ 0.91
CACNA1A-227ENST00000636549 IFFO1Q0D2I5 559 aa20.76■□□□□ 0.91
CACNA1A-227ENST00000636549 THEMISQ8N1K5 641 aaPredicted RBP20.76■□□□□ 0.91
CACNA1A-227ENST00000636549 UPF3BQ9BZI7 483 aaKnown RBP20.76■□□□□ 0.91
CACNA1A-227ENST00000636549 SYNCQ9H7C4 482 aa20.76■□□□□ 0.91
CACNA1A-227ENST00000636549 SNRKQ9NRH2 765 aa20.76■□□□□ 0.91
CACNA1A-227ENST00000636549 GOLGA6L7A0A1B0GV03 622 aa20.76■□□□□ 0.91
CACNA1A-227ENST00000636549 CCDC192P0DO97 292 aa20.76■□□□□ 0.91
CACNA1A-227ENST00000636549 RAPGEF3O95398 923 aa20.75■□□□□ 0.91
CACNA1A-227ENST00000636549 HAND2P61296 217 aa20.75■□□□□ 0.91
CACNA1A-227ENST00000636549 FAM170AA1A519 330 aa20.74■□□□□ 0.91
CACNA1A-227ENST00000636549 IFIT1P09914 478 aaKnown RBP20.74■□□□□ 0.91
CACNA1A-227ENST00000636549 RIMBP2O15034 1052 aa20.74■□□□□ 0.91
CACNA1A-227ENST00000636549 ATP5J2-PTCD1G3V325 749 aa20.74■□□□□ 0.91
CACNA1A-227ENST00000636549 CDKL5O76039 1030 aa20.74■□□□□ 0.91
CACNA1A-227ENST00000636549 PRPF40BQ6NWY9 871 aaKnown RBP20.74■□□□□ 0.91
CACNA1A-227ENST00000636549 GJA3Q9Y6H8 435 aa20.74■□□□□ 0.91
CACNA1A-227ENST00000636549 CCP110O43303 1012 aa20.74■□□□□ 0.91
CACNA1A-227ENST00000636549 LRSAM1Q6UWE0 723 aa20.74■□□□□ 0.91
CACNA1A-227ENST00000636549 WAPLQ7Z5K2 1190 aa20.74■□□□□ 0.91
CACNA1A-227ENST00000636549 SPA17Q15506 151 aa20.74■□□□□ 0.91
CACNA1A-227ENST00000636549 HOOK3Q86VS8 718 aa20.74■□□□□ 0.91
CACNA1A-227ENST00000636549 PDCP20941 246 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms